CSPI06G21250 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G21250
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	DNA binding protein
Location	Chr6 : 19242438 .. 19245650 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATACCATACCATACTCATAAATAATTGTGCTTCCAAAAGGAAATAAACTTTGTAGAGCCACGGGTTTGGAGTAGTTCGACTCTCCAATCCTCACCGGGAACACTAAACCATGCTCCGTCTTCAATGTCTCTCTTCTTCCTTTCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAAACTTTGTACTCTCAACTTCTCTCGCCCACTCCCCACTCTCACTACTACACGCAAACCTACTCCAAAATGCCAATACTCCTGGAACACGCAGCAGCACCAACAATCGGCCTTCGAACCGGCCCCTCACACCGATTCCCTTTCCCCACAGTCTCGCGCCGGAGGTACTTCCTTCTCTATTTCACTTCCTGTTTCCTGTTTCTCACTTTGTTTGACCCTCTATGAACTTAATTGTTTTTTTTTACCTTGTTCTCTTTTTCAAAGGGCTTCTCCTAATTCAAGGGGTTTTTTTTTTAGGTTCTTTATTTATTTTGTGTTCGTTGTTTTTTATTTATCTGGTTCTGAAGTATTATAATTTGGGTTTTTACTAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATGTATGTTTAACTTCAATTCTGAGCTTTGTTGTACTTCATGATATGCTATTTTTCTCTATAGTTAATTTTTTGAAGTTATTAATCGTTTAAAATTTGTCAGTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGAAAACAGGTGTTTCAATACGAGTTGATATCTAACTCCTCTTGTTATGCAAGCTTCTGAAATTTGAATTAATGAGTTAAACTGAAGTTCTAGGTTAATGTTGCTGACTACTATTCCAAAGGCACCGTATTTGGCATCTTAGAGGTGTGGAAAAGTAGTATCATTTCCTTGATGGAGTAGATGGTATTGAAAATACCAATGCATGTTTGTGGAGCTGTGTGCAACAATCATTTTTCTGTTTTCGAAAATCAAACTATTTGTAAGAAGTAAGAACGATAGTTGGATGATATCTTGTAAAGGTTAAGATCATTACGCATTTGAAATCACTTTTTTTTTTTAATTTGTTTTTGAAATCAGAACAACTTGAGTTGTTCTCAAGAAAATGTCACTATGAGAATAAACTCAATCAGACACAGAGATGAATTTTTTAGGTTTTTTTTTATAATCATTCTTTGATACCTCACTGAATTAGATTACACTTTGTTTTGTATATAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTAATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGGTATTATTTTTTACAAGTACAATTAAAATTTAAACCTCTAGTTGGGCCATGTTCACGTCTGTGTATTGTGCATATTTGGCAACCACAAACATCTATTATCTATACCATCGTCTGCCCAAGTATGCTTTCTCATATCTGAGAATTGCACGATTGTGTTGCACTAAACATTGAAAACAATGATGTCTTGATCCTTTTAGTAGCCAAATACCACTTCTTTCTTGCATGTACCCGCTGCCAAGTAAAATGATTTTTACGTCATAAGTTGTTTGTAAACAAAGCTTTGCAGGTTTGAAAACATAGTATTTTATCATAACAAGAGACGGCAAAATATTTGTTCTGTAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGTAAGTCTTGTATTGAACCGTTTATCATCCATTTGACATTAAATGTAAATGCTGAAGTCTGTTTCATGGGTCTTCAGTTGAAGAGAGCGTATGTGTTACCTCCAATAGAATTTAATCAGTTGGAAGCATTTGTGTCTCATTTACCCGTGTCATTTTATTTTCCAAACTCCTTGATAATATCACCATTGTTTTTTCCTCTTAAGTTTCCATTTGTATCTTCAACTATGACGATGGTTTCTAATAGGATTAATAAACTTCCTATCAAATACACGTGCTCCAAAAGAAGCGAGAGAGTTAGTGTATGAGAAGTTAGTATCCATGATTCATGAGGAGGTGCATCTTTAGTACAGATGGAGCCGTGTGAGCTGGATTGTTAGAATGAGTCATTGATCATCTTTGATTATATATAATTCAATGGATTTATGATTTTAATTGTCCTGCTTGAATCTGATTCTTTATTAGATATCTGAAATAGTCAGATTTACCTTTTAGTTTGCTTATTTCAAAGTTCAATAAACAATCTACACGTAACGGAACTTGATTTTTTTTTAAAGTTCTTTCTTCGGATAGCATTGATCCTGTGAACAGCAATGATGCTAGAGAAAGTCTACTGTTTCTTACTTCCTTAACTTTTCTGTTCTATTTTGCTGCACAAGCCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGGTATAGTCCTTTCCCGTTTACATTCTCACCTCAATATTTAGGTGTTAGGAAACTCAATCCTTGTCAGCCCTTTGTTATATCCATAATCATTTTTTACCACTAGAACAATCTACTGAGGTTGACATCAACCTTGTTTTTCCTCCAAATTGTGTGATTATAACTCGTAAATTGGATGTTTAAGGTTACGTTTCTGATACGGGTGAATTCATTATTCTGTAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATGACGAAGCCTGAAGATAGTAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAGTCTCTACTTTTTCTAGGCTGACTGAAGATGATTGTTGTGCTTATATCAGTTATCCTGATGAAAATAGTTAGCTAATCACCTTTTGTAATCTATGGGTCCACGTATTTTTTAATACATCTCTAAACCCTACATATACATATATTAGTTATTGCACCCACAGAGTTTACTTTCATTCTAAGTTCTCCATTTCATAATTTAAATCATTATTGACAACTTTATTCATAATGTCGAACAAAGTTCATTTTAATTTGAAATTTTTTTACCAATGG

mRNA sequence

ATGCTCCGTCTTCAATGTCTCTCTTCTTCCTTTCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAAACTTTGTACTCTCAACTTCTCTCGCCCACTCCCCACTCTCACTACTACACGCAAACCTACTCCAAAATGCCAATACTCCTGGAACACGCAGCAGCACCAACAATCGGCCTTCGAACCGGCCCCTCACACCGATTCCCTTTCCCCACAGTCTCGCGCCGGAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTAATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCACCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATGACGAAGCCTGAAGATAGTAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAG

Coding sequence (CDS)

ATGCTCCGTCTTCAATGTCTCTCTTCTTCCTTTCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAAACTTTGTACTCTCAACTTCTCTCGCCCACTCCCCACTCTCACTACTACACGCAAACCTACTCCAAAATGCCAATACTCCTGGAACACGCAGCAGCACCAACAATCGGCCTTCGAACCGGCCCCTCACACCGATTCCCTTTCCCCACAGTCTCGCGCCGGAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGTAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTAATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCACCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATGACGAAGCCTGAAGATAGTAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAG

Homology

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BLAST of CSPI06G21250 vs. Swiss-Prot
Match: WHY1_ARATH (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana GN=WHY1 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-89
Identity = 156/228 (68.42%), Postives = 189/228 (82.89%), Query Frame = 1


Query: 46  KPTPKCQYSWNTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTV 105
           KPT K    ++ +  Q   FE     DS S  S    A  LP RF+VGHSIYKGKAALTV
Sbjct: 40  KPTTKTVKLFSVKSRQTDYFEKQRFGDSSSSPS---PAEGLPARFYVGHSIYKGKAALTV 99

Query: 106 EPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPR 165
           +PR PEF  LDSGAFK+S++G ++LQFAP+AGVRQYDWS+KQVFSLSVTE+G+L++LGPR
Sbjct: 100 DPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPR 159

Query: 166 EACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEY 225
           E+CEFFHDP+KGKSDEGKVRK+LKVEPLPDGSGHFFNL+VQNKL+NVDESIYIPIT+AE+
Sbjct: 160 ESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEF 219

Query: 226 TVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
            VL+ AF F+LP+L+GWH  AN++ KPE++SR N A+P YGGD+EWNR
Sbjct: 220 AVLISAFNFVLPYLIGWHAFANSI-KPEETSRVNNASPNYGGDYEWNR 263

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BLAST of CSPI06G21250 vs. Swiss-Prot
Match: WHY1_SOLTU (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum GN=WHY1 PE=1 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.4e-86
Identity = 149/209 (71.29%), Postives = 177/209 (84.69%), Query Frame = 1


Query: 70  HTDSLSPQSRAGAAAALP-----PRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISR 129
           H+D   PQ +       P     P+ FVG+SIYKGKAALTVEPR PEF+PLDSGAFK+SR
Sbjct: 67  HSDYFEPQQQQQQQQQQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSR 126

Query: 130 EGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKV 189
           EG+VMLQFAPAAGVRQYDWSRKQVFSLSVTE+GS+I+LG +++CEFFHDP KG+SDEG+V
Sbjct: 127 EGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRV 186

Query: 190 RKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHT 249
           RK+LKVEPLPDGSGHFFNL+VQNKLIN+DE+IYIP+TKAE+ VLV AF F++P+L+GWHT
Sbjct: 187 RKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHT 246

Query: 250 IANTMTKPEDSSRGNTANPRYGGDFEWNR 274
             N+  KPED+SR N ANPR G + EWNR
Sbjct: 247 AVNSF-KPEDASRSNNANPRSGAELEWNR 274

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BLAST of CSPI06G21250 vs. Swiss-Prot
Match: WHY3_ARATH (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana GN=WHY3 PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 9.0e-86
Identity = 154/229 (67.25%), Postives = 188/229 (82.10%), Query Frame = 1


Query: 46  KPTPKCQYSWNTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTV 105
           KPT + + +   +  Q   FE     DS S Q+    A    PRF+VGHSIYKGKAALT+
Sbjct: 47  KPTARLKLT--VKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTI 106

Query: 106 EPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPR 165
           EPR PEF  L+SGAFK+++EG ++LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LGPR
Sbjct: 107 EPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPR 166

Query: 166 EACEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAE 225
           E+CEFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNL+VQNKL+NVDES+YIPITKAE
Sbjct: 167 ESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAE 226

Query: 226 YTVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           + VL+ AF F+LPHL+GW   AN++ KPEDS+R N A+P+YGGD+EW+R
Sbjct: 227 FAVLISAFNFVLPHLIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 268

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BLAST of CSPI06G21250 vs. Swiss-Prot
Match: WHY1_MAIZE (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays GN=WHY1 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.5e-69
Identity = 123/214 (57.48%), Postives = 160/214 (74.77%), Query Frame = 1


Query: 70  HTDSLSPQS----RAGAAAALPP------RFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 129
           H+D   P++    R       PP      R F  +SIYKGKAAL+ +PRPP F PLDSGA
Sbjct: 56  HSDYFDPRAPPPPRGDGGYGRPPNGAQDGRVFTSYSIYKGKAALSFDPRPPLFVPLDSGA 115

Query: 130 FKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKS 189
           +K+++EG V+LQFAPA   RQYDW+RKQVFSLSV E+G+L+ LGP ++CEFFHDP+KG+S
Sbjct: 116 YKVAKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRS 175

Query: 190 DEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 249
           +EGKVRK+LK+EP PDG+G FFNL+VQN+LINVDESIYIPITK E+ V+V  F +I+PHL
Sbjct: 176 EEGKVRKVLKIEPTPDGNGRFFNLSVQNRLINVDESIYIPITKGEFAVIVSTFNYIIPHL 235

Query: 250 MGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           MGW T  +++ KPE+S     + P+   ++EW R
Sbjct: 236 MGWSTFVSSI-KPEESR--PYSRPQSTSEYEWRR 266

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BLAST of CSPI06G21250 vs. Swiss-Prot
Match: WHY2_ARATH (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana GN=WHY2 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-45
Identity = 90/197 (45.69%), Postives = 128/197 (64.97%), Query Frame = 1


Query: 81  GAAAALPP-RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVR 140
           G  AA P  R F  +SI+KGKAAL+VEP  P FT +DSG  +I R G +M+ F PA G R
Sbjct: 44  GKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGER 103

Query: 141 QYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGH 200
           +YDW +KQ F+LS TE+GSLI++G +++ EFFHDP    S+ G+VRK L V+P  DGSG+
Sbjct: 104 KYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGY 163

Query: 201 FFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTI---ANTMTKPEDSS 260
           F +L+V N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +    NT   P  + 
Sbjct: 164 FISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNV 223

Query: 261 RGNTANPRYGGDFEWNR 274
                 P+   + EW++
Sbjct: 224 SHLKTEPQL--ELEWDK 238

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BLAST of CSPI06G21250 vs. TrEMBL
Match: A0A0A0KG25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404240 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 1.9e-154
Identity = 271/276 (98.19%), Postives = 272/276 (98.55%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSPETLSNPKLCTLNFSRPLPTLTTTRKPTPKCQYSWNTQQH 60
           MLRLQCLSSSFLPTFNPELSPETLSNP+LCTLNFSRPLPTLTTTRKPT KCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSFLPTFNPELSPETLSNPRLCTLNFSRPLPTLTTTRKPTSKCQYSWNTQQH 60

Query: 61  QQSAFEPAPHTDSLSPQSRAGAAA---ALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120
           QQSAFEPAPHTDSLSPQSRAGAAA   ALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS
Sbjct: 61  QQSAFEPAPHTDSLSPQSRAGAAAAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120

Query: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180
           GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG
Sbjct: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180

Query: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240
           KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP
Sbjct: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240

Query: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 276

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BLAST of CSPI06G21250 vs. TrEMBL
Match: V4TEW9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032427mg PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.6e-92
Identity = 181/275 (65.82%), Postives = 214/275 (77.82%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSP-ETLSNPKLCTL-NFSRPLPTLTTTRKPTPKCQYSWNTQ 60
           ML+LQCLSS    T NP+L P  +LSN K     +FS    T    +K   KC+ S   +
Sbjct: 2   MLQLQCLSSQ---TLNPKLCPFHSLSNSKGNGFGSFSVTESTSIKKKKLYVKCRQS---E 61

Query: 61  QHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120
            ++Q +F  +P   S +P   A     LP R +VGHSIYKGKAALTVEPR PEF  LDSG
Sbjct: 62  YYEQKSFSASPSNSSYAPTDVA--VGTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSG 121

Query: 121 AFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGK 180
           A K+SREG VMLQFAPAAGVRQYDWSRKQVFSLSVTE+GSL+ALG RE+CEFFHDP+KGK
Sbjct: 122 AVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFKGK 181

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPH 240
           S+EGKVRK+LKVEPLPDGSGHFFNL+VQNKLIN+DESIYIP+T+AEYTVLV AF FILP+
Sbjct: 182 SEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFILPY 241

Query: 241 LMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           L+GWH  A+T+ + +D++R N ANPRYGGD+EWNR
Sbjct: 242 LLGWHAYASTI-RADDTARTNNANPRYGGDYEWNR 267

[Close]

BLAST of CSPI06G21250 vs. TrEMBL
Match: A0A067H551_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024467mg PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-91
Identity = 180/275 (65.45%), Postives = 213/275 (77.45%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSP-ETLSNPKLCTL-NFSRPLPTLTTTRKPTPKCQYSWNTQ 60
           ML+LQCLSS    T NP+L P  +LSN K     + S    T    +K   KC+ S   +
Sbjct: 2   MLQLQCLSSQ---TLNPKLCPFHSLSNSKGNGFGSISVTESTSIKKKKLYVKCRQS---E 61

Query: 61  QHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120
            ++Q +F  +P   S +P   A     LP R +VGHSIYKGKAALTVEPR PEF  LDSG
Sbjct: 62  YYEQKSFSASPSNSSYAPTDVA--VGTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSG 121

Query: 121 AFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGK 180
           A K+SREG VMLQFAPAAGVRQYDWSRKQVFSLSVTE+GSL+ALG RE+CEFFHDP+KGK
Sbjct: 122 AVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFKGK 181

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPH 240
           S+EGKVRK+LKVEPLPDGSGHFFNL+VQNKLIN+DESIYIP+T+AEYTVLV AF FILP+
Sbjct: 182 SEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFILPY 241

Query: 241 LMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           L+GWH  A+T+ + +D++R N ANPRYGGD+EWNR
Sbjct: 242 LLGWHAYASTI-RADDTARTNNANPRYGGDYEWNR 267

[Close]

BLAST of CSPI06G21250 vs. TrEMBL
Match: A0A0D2SAD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G077400 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.2e-91
Identity = 180/279 (64.52%), Postives = 214/279 (76.70%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSPETL-----SNPKLCTLNFSRPLPTLTTTRKPTPKCQYS- 60
           ML+LQ LSS       P L+P+TL     SNPKL   +FS    + T + K  P  + S 
Sbjct: 1   MLQLQLLSS-------PPLTPQTLNLNSISNPKLFP-SFSSLNSSQTRSFKFNPLSKPSK 60

Query: 61  WNTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTP 120
           ++ +  Q   F+     +  S  +   + A LP RF+VGHSIYKGKAALTVEPR PEF P
Sbjct: 61  FSLKCRQSEYFDQKQRFNDSSSSTSPSSLAGLPARFYVGHSIYKGKAALTVEPRAPEFVP 120

Query: 121 LDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDP 180
           LDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+LI+LG RE+CEFFHDP
Sbjct: 121 LDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDP 180

Query: 181 YKGKSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKF 240
           +KGKSDEGKVRK+LKVEPLPDGSGHFFNL VQNKL+NVDE++YIPIT+ E+TVL  AF F
Sbjct: 181 FKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSAFSF 240

Query: 241 ILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           ILP+L+GWH  AN+ TKP+D+SR N ANPRYGGD+EW+R
Sbjct: 241 ILPYLLGWHAFANS-TKPDDTSRANNANPRYGGDYEWSR 270

[Close]

BLAST of CSPI06G21250 vs. TrEMBL
Match: A0A0D2VAT0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G077400 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.8e-91
Identity = 180/278 (64.75%), Postives = 215/278 (77.34%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSPETL-----SNPKLCTLNFSRPLPTLTTTRKPTPKCQYSW 60
           ML+LQ LSS       P L+P+TL     SNPKL   +FS    + T + K  P  + S 
Sbjct: 1   MLQLQLLSS-------PPLTPQTLNLNSISNPKLFP-SFSSLNSSQTRSFKFNPLSKPSK 60

Query: 61  NTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPL 120
            + + +QS +       + S  S + ++  LP RF+VGHSIYKGKAALTVEPR PEF PL
Sbjct: 61  FSLKCRQSEYFDQKQRFNDSSSSTSPSSLGLPARFYVGHSIYKGKAALTVEPRAPEFVPL 120

Query: 121 DSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPY 180
           DSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+LI+LG RE+CEFFHDP+
Sbjct: 121 DSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPF 180

Query: 181 KGKSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFI 240
           KGKSDEGKVRK+LKVEPLPDGSGHFFNL VQNKL+NVDE++YIPIT+ E+TVL  AF FI
Sbjct: 181 KGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSAFSFI 240

Query: 241 LPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           LP+L+GWH  AN+ TKP+D+SR N ANPRYGGD+EW+R
Sbjct: 241 LPYLLGWHAFANS-TKPDDTSRANNANPRYGGDYEWSR 269

[Close]

BLAST of CSPI06G21250 vs. TAIR10
Match: AT1G14410.1 (AT1G14410.1 ssDNA-binding transcriptional regulator)

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-90
Identity = 156/228 (68.42%), Postives = 189/228 (82.89%), Query Frame = 1


Query: 46  KPTPKCQYSWNTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTV 105
           KPT K    ++ +  Q   FE     DS S  S    A  LP RF+VGHSIYKGKAALTV
Sbjct: 40  KPTTKTVKLFSVKSRQTDYFEKQRFGDSSSSPS---PAEGLPARFYVGHSIYKGKAALTV 99

Query: 106 EPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPR 165
           +PR PEF  LDSGAFK+S++G ++LQFAP+AGVRQYDWS+KQVFSLSVTE+G+L++LGPR
Sbjct: 100 DPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPR 159

Query: 166 EACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEY 225
           E+CEFFHDP+KGKSDEGKVRK+LKVEPLPDGSGHFFNL+VQNKL+NVDESIYIPIT+AE+
Sbjct: 160 ESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEF 219

Query: 226 TVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
            VL+ AF F+LP+L+GWH  AN++ KPE++SR N A+P YGGD+EWNR
Sbjct: 220 AVLISAFNFVLPYLIGWHAFANSI-KPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of CSPI06G21250 vs. TAIR10
Match: AT2G02740.1 (AT2G02740.1 ssDNA-binding transcriptional regulator)

HSP 1 Score: 318.2 bits (814), Expect = 5.1e-87
Identity = 154/229 (67.25%), Postives = 188/229 (82.10%), Query Frame = 1


Query: 46  KPTPKCQYSWNTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTV 105
           KPT + + +   +  Q   FE     DS S Q+    A    PRF+VGHSIYKGKAALT+
Sbjct: 47  KPTARLKLT--VKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTI 106

Query: 106 EPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPR 165
           EPR PEF  L+SGAFK+++EG ++LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LGPR
Sbjct: 107 EPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPR 166

Query: 166 EACEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAE 225
           E+CEFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNL+VQNKL+NVDES+YIPITKAE
Sbjct: 167 ESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAE 226

Query: 226 YTVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           + VL+ AF F+LPHL+GW   AN++ KPEDS+R N A+P+YGGD+EW+R
Sbjct: 227 FAVLISAFNFVLPHLIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CSPI06G21250 vs. TAIR10
Match: AT1G71260.1 (AT1G71260.1 WHIRLY 2)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46
Identity = 90/197 (45.69%), Postives = 128/197 (64.97%), Query Frame = 1


Query: 81  GAAAALPP-RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVR 140
           G  AA P  R F  +SI+KGKAAL+VEP  P FT +DSG  +I R G +M+ F PA G R
Sbjct: 44  GKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGER 103

Query: 141 QYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGH 200
           +YDW +KQ F+LS TE+GSLI++G +++ EFFHDP    S+ G+VRK L V+P  DGSG+
Sbjct: 104 KYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGY 163

Query: 201 FFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTI---ANTMTKPEDSS 260
           F +L+V N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +    NT   P  + 
Sbjct: 164 FISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNV 223

Query: 261 RGNTANPRYGGDFEWNR 274
                 P+   + EW++
Sbjct: 224 SHLKTEPQL--ELEWDK 238

[Close]

BLAST of CSPI06G21250 vs. NCBI nr
Match: gi|778715953|ref|XP_011657483.1| (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 553.1 bits (1424), Expect = 2.7e-154
Identity = 271/276 (98.19%), Postives = 272/276 (98.55%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSPETLSNPKLCTLNFSRPLPTLTTTRKPTPKCQYSWNTQQH 60
           MLRLQCLSSSFLPTFNPELSPETLSNP+LCTLNFSRPLPTLTTTRKPT KCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSFLPTFNPELSPETLSNPRLCTLNFSRPLPTLTTTRKPTSKCQYSWNTQQH 60

Query: 61  QQSAFEPAPHTDSLSPQSRAGAAA---ALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120
           QQSAFEPAPHTDSLSPQSRAGAAA   ALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS
Sbjct: 61  QQSAFEPAPHTDSLSPQSRAGAAAAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120

Query: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180
           GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG
Sbjct: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180

Query: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240
           KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP
Sbjct: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240

Query: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 276

[Close]

BLAST of CSPI06G21250 vs. NCBI nr
Match: gi|659113233|ref|XP_008456468.1| (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 533.9 bits (1374), Expect = 1.7e-148
Identity = 260/273 (95.24%), Postives = 265/273 (97.07%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSPETLSNPKLCTLNFSRPLPTLTTTRKPTPKCQYSWNTQQH 60
           MLRLQ LSSS LPTFNPELSPETLSNP+LC+LNF RPL TLTTTRKP+PKCQYSWNT QH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQS+FEPA  TDS SPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180
           KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNL+VQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of CSPI06G21250 vs. NCBI nr
Match: gi|567892213|ref|XP_006438627.1| (hypothetical protein CICLE_v10032427mg [Citrus clementina])

HSP 1 Score: 346.7 bits (888), Expect = 3.8e-92
Identity = 181/275 (65.82%), Postives = 214/275 (77.82%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSP-ETLSNPKLCTL-NFSRPLPTLTTTRKPTPKCQYSWNTQ 60
           ML+LQCLSS    T NP+L P  +LSN K     +FS    T    +K   KC+ S   +
Sbjct: 2   MLQLQCLSSQ---TLNPKLCPFHSLSNSKGNGFGSFSVTESTSIKKKKLYVKCRQS---E 61

Query: 61  QHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120
            ++Q +F  +P   S +P   A     LP R +VGHSIYKGKAALTVEPR PEF  LDSG
Sbjct: 62  YYEQKSFSASPSNSSYAPTDVA--VGTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSG 121

Query: 121 AFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGK 180
           A K+SREG VMLQFAPAAGVRQYDWSRKQVFSLSVTE+GSL+ALG RE+CEFFHDP+KGK
Sbjct: 122 AVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFKGK 181

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPH 240
           S+EGKVRK+LKVEPLPDGSGHFFNL+VQNKLIN+DESIYIP+T+AEYTVLV AF FILP+
Sbjct: 182 SEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFILPY 241

Query: 241 LMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           L+GWH  A+T+ + +D++R N ANPRYGGD+EWNR
Sbjct: 242 LLGWHAYASTI-RADDTARTNNANPRYGGDYEWNR 267

[Close]

BLAST of CSPI06G21250 vs. NCBI nr
Match: gi|568859393|ref|XP_006483225.1| (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic [Citrus sinensis])

HSP 1 Score: 344.4 bits (882), Expect = 1.9e-91
Identity = 180/275 (65.45%), Postives = 213/275 (77.45%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSP-ETLSNPKLCTL-NFSRPLPTLTTTRKPTPKCQYSWNTQ 60
           ML+LQCLSS    T NP+L P  +LSN K     + S    T    +K   KC+ S   +
Sbjct: 2   MLQLQCLSSQ---TLNPKLCPFHSLSNSKGNGFGSISVTESTSIKKKKLYVKCRQS---E 61

Query: 61  QHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120
            ++Q +F  +P   S +P   A     LP R +VGHSIYKGKAALTVEPR PEF  LDSG
Sbjct: 62  YYEQKSFSASPSNSSYAPTDVA--VGTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSG 121

Query: 121 AFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGK 180
           A K+SREG VMLQFAPAAGVRQYDWSRKQVFSLSVTE+GSL+ALG RE+CEFFHDP+KGK
Sbjct: 122 AVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFKGK 181

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILPH 240
           S+EGKVRK+LKVEPLPDGSGHFFNL+VQNKLIN+DESIYIP+T+AEYTVLV AF FILP+
Sbjct: 182 SEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFILPY 241

Query: 241 LMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           L+GWH  A+T+ + +D++R N ANPRYGGD+EWNR
Sbjct: 242 LLGWHAYASTI-RADDTARTNNANPRYGGDYEWNR 267

[Close]

BLAST of CSPI06G21250 vs. NCBI nr
Match: gi|823261095|ref|XP_012463275.1| (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 343.6 bits (880), Expect = 3.2e-91
Identity = 180/279 (64.52%), Postives = 214/279 (76.70%), Query Frame = 1


Query: 1   MLRLQCLSSSFLPTFNPELSPETL-----SNPKLCTLNFSRPLPTLTTTRKPTPKCQYS- 60
           ML+LQ LSS       P L+P+TL     SNPKL   +FS    + T + K  P  + S 
Sbjct: 1   MLQLQLLSS-------PPLTPQTLNLNSISNPKLFP-SFSSLNSSQTRSFKFNPLSKPSK 60

Query: 61  WNTQQHQQSAFEPAPHTDSLSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTP 120
           ++ +  Q   F+     +  S  +   + A LP RF+VGHSIYKGKAALTVEPR PEF P
Sbjct: 61  FSLKCRQSEYFDQKQRFNDSSSSTSPSSLAGLPARFYVGHSIYKGKAALTVEPRAPEFVP 120

Query: 121 LDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDP 180
           LDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+LI+LG RE+CEFFHDP
Sbjct: 121 LDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDP 180

Query: 181 YKGKSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKF 240
           +KGKSDEGKVRK+LKVEPLPDGSGHFFNL VQNKL+NVDE++YIPIT+ E+TVL  AF F
Sbjct: 181 FKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSAFSF 240

Query: 241 ILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           ILP+L+GWH  AN+ TKP+D+SR N ANPRYGGD+EW+R
Sbjct: 241 ILPYLLGWHAFANS-TKPDDTSRANNANPRYGGDYEWSR 270

The following BLAST results are available for this feature:

BLAST of CSPI06G21250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WHY1_ARATH	3.0e-89	68.42	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
WHY1_SOLTU	2.4e-86	71.29	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum GN=...	[more]
WHY3_ARATH	9.0e-86	67.25	Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana ...	[more]
WHY1_MAIZE	4.5e-69	57.48	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays GN=WHY1 PE=2...	[more]
WHY2_ARATH	2.7e-45	45.69	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of CSPI06G21250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG25_CUCSA	1.9e-154	98.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404240 PE=4 SV=1	[more]
V4TEW9_9ROSI	2.6e-92	65.82	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032427mg PE=4 SV=1	[more]
A0A067H551_CITSI	1.3e-91	65.45	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024467mg PE=4 SV=1	[more]
A0A0D2SAD5_GOSRA	2.2e-91	64.52	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G077400 PE=4 SV=1	[more]
A0A0D2VAT0_GOSRA	3.8e-91	64.75	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G077400 PE=4 SV=1	[more]

BLAST of CSPI06G21250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14410.1	1.7e-90	68.42	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	5.1e-87	67.25	ssDNA-binding transcriptional regulator	[more]
AT1G71260.1	1.5e-46	45.69	WHIRLY 2	[more]

BLAST of CSPI06G21250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778715953\|ref\|XP_011657483.1\|	2.7e-154	98.19	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis...	[more]
gi\|659113233\|ref\|XP_008456468.1\|	1.7e-148	95.24	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis...	[more]
gi\|567892213\|ref\|XP_006438627.1\|	3.8e-92	65.82	hypothetical protein CICLE_v10032427mg [Citrus clementina]	[more]
gi\|568859393\|ref\|XP_006483225.1\|	1.9e-91	65.45	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic [Citrus sinen...	[more]
gi\|823261095\|ref\|XP_012463275.1\|	3.2e-91	64.52	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like isoform ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009044	ssDNA-bd_transcriptional_reg
IPR013742	Whirly

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032211	negative regulation of telomere maintenance via telomerase
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006952	defense response
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0009508	plastid chromosome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0042162	telomeric DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G21250.1	CSPI06G21250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	G3DSA:2.30.31.10		coord: 86..254 score: 1.4
IPR009044	ssDNA-binding transcriptional regulator	unknown	SSF54447	ssDNA-binding transcriptional regulator domain	coord: 88..273 score: 2.75
IPR013742	Plant transcription factor	PFAM	PF08536	Whirly	coord: 96..230 score: 1.9
None	No IPR available	PANTHER	PTHR31745	FAMILY NOT NAMED	coord: 2..273 score: 3.1E
None	No IPR available	PANTHER	PTHR31745:SF2	SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC-RELATED	coord: 2..273 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G21250	Cla021884	Watermelon (97103) v1	cpiwmB484
CSPI06G21250	Csa6G404240	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G21250	MELO3C019785	Melon (DHL92) v3.5.1	cpimeB474
CSPI06G21250	ClCG08G008880	Watermelon (Charleston Gray)	cpiwcgB535
CSPI06G21250	Lsi08G007360	Bottle gourd (USVL1VR-Ls)	cpilsiB488
CSPI06G21250	MELO3C019785.2	Melon (DHL92) v3.6.1	cpimedB466
CSPI06G21250	CsaV3_6G036290	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G21250	Cla97C08G151690	Watermelon (97103) v2	cpiwmbB525
CSPI06G21250	Bhi04G001019	Wax gourd	cpiwgoB587
CSPI06G21250	Cucsa.005520	Cucumber (Gy14) v1	cgycpiB051
CSPI06G21250	CmaCh05G009320	Cucurbita maxima (Rimu)	cmacpiB818
CSPI06G21250	CmaCh12G007150	Cucurbita maxima (Rimu)	cmacpiB196
CSPI06G21250	CmoCh05G009520	Cucurbita moschata (Rifu)	cmocpiB803
CSPI06G21250	CmoCh12G006480	Cucurbita moschata (Rifu)	cmocpiB181
CSPI06G21250	Cp4.1LG11g07290	Cucurbita pepo (Zucchini)	cpecpiB119
CSPI06G21250	Cp4.1LG07g05590	Cucurbita pepo (Zucchini)	cpecpiB840
CSPI06G21250	CsGy6G020490	Cucumber (Gy14) v2	cgybcpiB287

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None