CSPI06G19370 (gene) Wild cucumber (PI 183967)

NameCSPI06G19370
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 17506443 .. 17506795 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAAACGGAGGTGGGAGTCGATGGCGATCGGTGCTGGAGAGTGGTGAGTGGTGAGTGGAGTGGTGGTCGTGAAAGAAAAGGGCGAGAGGGTCAAATCAAAATTGGAGGAAGGGGTTAGGTGGGGGCTTAGTTGAAATTGACGGCGTATGGCGTGAAATGTATAATGGCAACGGTGGAGGGGCCCATTTGGACGGAATAATTGTAGCGACCGCCATTGATGGAGCTTGCTACGGCTTTTCTCAAGGCCCCATTACTGTGATAGGAACAATACGCCTTCAACCCATTCCTCTTCTTCAACATTATTATGAATCTCTACCTCTTTCCACAATTGGTGATGAGATGAGATGA

mRNA sequence

ATGACGGAAACGGAGGTGGGAGTCGATGGCGATCGGTGCTGGAGAGTGGTGAGTGTTGAAATTGACGGCGTATGGCGTGAAATGTATAATGGCAACGGTGGAGGGGCCCATTTGGACGGAATAATTGTAGCGACCGCCATTGATGGAGCTTGCTACGGCTTTTCTCAAGGCCCCATTACTGTGATAGGAACAATACGCCTTCAACCCATTCCTCTTCTTCAACATTATTATGAATCTCTACCTCTTTCCACAATTGGTGATGAGATGAGATGA

Coding sequence (CDS)

ATGACGGAAACGGAGGTGGGAGTCGATGGCGATCGGTGCTGGAGAGTGGTGAGTGTTGAAATTGACGGCGTATGGCGTGAAATGTATAATGGCAACGGTGGAGGGGCCCATTTGGACGGAATAATTGTAGCGACCGCCATTGATGGAGCTTGCTACGGCTTTTCTCAAGGCCCCATTACTGTGATAGGAACAATACGCCTTCAACCCATTCCTCTTCTTCAACATTATTATGAATCTCTACCTCTTTCCACAATTGGTGATGAGATGAGATGA
BLAST of CSPI06G19370 vs. TrEMBL
Match: A0A0A0KFK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G365190 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.5e-47
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1

Query: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60
          MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT
Sbjct: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60

Query: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 91
          VIGTIRLQPIPLLQHYYESLPLSTIGDEMR
Sbjct: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 90

BLAST of CSPI06G19370 vs. NCBI nr
Match: gi|700192415|gb|KGN47619.1| (hypothetical protein Csa_6G365190 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-46
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1

Query: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60
          MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT
Sbjct: 1  MTETEVGVDGDRCWRVVSVEIDGVWREMYNGNGGGAHLDGIIVATAIDGACYGFSQGPIT 60

Query: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 91
          VIGTIRLQPIPLLQHYYESLPLSTIGDEMR
Sbjct: 61 VIGTIRLQPIPLLQHYYESLPLSTIGDEMR 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KFK9_CUCSA9.5e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G365190 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700192415|gb|KGN47619.1|1.4e-46100.00hypothetical protein Csa_6G365190 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G19370.1CSPI06G19370.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G19370Csa6G365190Cucumber (Chinese Long) v2cpicuB313
CSPI06G19370MELO3C011451Melon (DHL92) v3.5.1cpimeB464
CSPI06G19370MELO3C011451.2Melon (DHL92) v3.6.1cpimedB456
CSPI06G19370CsaV3_6G032300Cucumber (Chinese Long) v3cpicucB363
The following gene(s) are paralogous to this gene:

None