CSPI06G19120 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G19120
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 17341628 .. 17342806 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAACCCAACGCTGGATGATTTGCAGTCGATGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCCTCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTCGAGAATTTCTTCATACTAATGGTATGGTTCCCTCCTCAGGAATTTTTCATCCAAATTATCTTTCAATTTTTGTTGAAACACAGTGTGTATGATATTGTGCTCTCTCACGTTGATTTCTGAAAGATTAGGGTAATATTCTTTCGATCAAACCATTTATAAATTTTTAAGAAAATGTTCCTTTCATTTTCGTAATTTTATAAAATTTGGTATTTTTAAAATTAAGGATAGAATTGTCAGAAAATTAATTTTATTTTTTGAAACTATTAACATTGGTTAATTACGAAGAAAAAAAGTGAAAATTGTGTTTATTTAACCCTAATTTTCAGAAACTACGAGTTTAGTTTGGCAAAAATTTAGATTTGGTTTCTCTCCTTATTTCGTCTATAGAAACTTCAAATATATTAAAGAATTACTTGAATTCATTGTCAAAATTTAACAAGTTGAAATACTATTTTTAGGGCTAATTTTTATAACATAAATCAAATGATTATGGCCTAAATTGTTATTAAATAGAGCTTAATGAAACACTTAGGGGCTAATTTTTTAGGTTTTATTCTGTCAAATCTTATGTAATTAGTTTCAATTTTTTACTTTAATCCTCTAAAAATTTTAATTTTACGACCCAAAATCATTTATTATTATTATTACTATTATTTTGAATCTAAATGTTGGCAGGAGTGCACAGCAGAAAACTAGAGATTCATGGTAGGCTAGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAACATAAGTCCTCAGTATCAAATGTTCGAGTAA

mRNA sequence

ATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAACCCAACGCTGGATGATTTGCAGTCGATGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCCTCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTCGAGAATTTCTTCATACTAATGGAGTGCACAGCAGAAAACTAGAGATTCATGGTAGGCTAGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAACATAAGTCCTCAGTATCAAATGTTCGAGTAA

Coding sequence (CDS)

ATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAACCCAACGCTGGATGATTTGCAGTCGATGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCCTCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTCGAGAATTTCTTCATACTAATGGAGTGCACAGCAGAAAACTAGAGATTCATGGTAGGCTAGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAACATAAGTCCTCAGTATCAAATGTTCGAGTAA
Homology
[Close]
BLAST of CSPI06G19120 vs. TrEMBL
Match: A0A0A0KIL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362980 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-93
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1 

Query: 6   MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLR 65
           MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS AEQPAGCGFGNMGMVELLR
Sbjct: 1   MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSTAEQPAGCGFGNMGMVELLR 60

Query: 66  QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV 125
           QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV
Sbjct: 61  QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV 120

Query: 126 LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
           LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
Sbjct: 121 LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 168

[Close]
BLAST of CSPI06G19120 vs. TrEMBL
Match: A5AXA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002228 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-17
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 1 

Query: 18  DYPYESSINANI-------LNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQ---- 77
           D PY    + ++       LNF +  NP L D+ S+ +  +          EL       
Sbjct: 7   DVPYHDPFSFDLPLVVVEDLNFSDPPNPNLSDIPSLVKPDSNPYLIPQSSDELADNTIDP 66

Query: 78  ----FSY-----GNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLP 137
               F++      NG  + +  P  + GE      + +   IPS   S  LP+WPL P+P
Sbjct: 67  FKDSFAWELCDDSNGD-NPQLTPMEVHGETSS-QAETSQQQIPSFENSVPLPVWPLPPVP 126

Query: 138 FLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
           + CSCCQ+LRE +HTNG ++ KLE+HGR G+ISHA+LE      VD I P + MF+
Sbjct: 127 YGCSCCQILREIIHTNGTYTTKLEVHGRPGLISHAVLE-SHYCAVDGIPPDHHMFD 179

[Close]
BLAST of CSPI06G19120 vs. TrEMBL
Match: A0A061G426_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015956 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.2e-15
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 1 

Query: 63  LLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSC 122
           ++R F        S+AG   + G   +P + +  T   +   S  L +WP+ P+PF CSC
Sbjct: 67  VIRDFYNERNAGTSQAGFFGLSGVMNNPTEKNMGTESLNFENSMPLSVWPIEPVPFGCSC 126

Query: 123 CQVLREFLHTNGVHSRKLEIHGRLGMISHAIL-EHKPIVNVDNISPQYQMFE 174
           CQVLRE +HTNG++  KLEIHGRLG+I HAIL +     N      QYQMF+
Sbjct: 127 CQVLREIVHTNGINVTKLEIHGRLGIICHAILTDRSGSTNAVAPDHQYQMFD 178

[Close]
BLAST of CSPI06G19120 vs. TrEMBL
Match: B9RQU6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0706580 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-14
Identity = 54/150 (36.00%), Postives = 79/150 (52.67%), Query Frame = 1 

Query: 20  PYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVE---------LLRQFSYG 79
           P+ + IN    +F  D NPTL ++    +QP    F +  +V+         +   FS  
Sbjct: 13  PHNTPINLEYFDFTLDSNPTLANIDEQPQQPTSVHFHSDDIVDPSNPFDGPMIWNNFSSN 72

Query: 80  NGQYDSEAGPS--NIGGEEEDPHQDDNY-TNIPSDVESKLLPIWPLTPLPFLCSCCQVLR 139
           N   ++EAGPS  N   E +  +  +N  +    D   + +  WP    PF C+ CQVLR
Sbjct: 73  N---NNEAGPSTQNCRNEGDAENVSENVRSRCSGDGIGRPITSWPPPFAPFQCTYCQVLR 132

Query: 140 EFLHTNGVHSRKLEIHGRLGMISHAILEHK 158
           E +HT+G  + KLEIHGRLGMI HA+LE++
Sbjct: 133 EIIHTDGNCTSKLEIHGRLGMICHAVLENR 159

[Close]
BLAST of CSPI06G19120 vs. TrEMBL
Match: A0A067KQE7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07620 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12
Identity = 58/179 (32.40%), Postives = 88/179 (49.16%), Query Frame = 1 

Query: 3   ADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVE 62
           ADP +   + +      P++  I+ + L+F  D NP L +L S   +P      +   V 
Sbjct: 2   ADPRSVVPYHD------PHDGPIDYDYLSFILDSNPNLVNL-SPVNEPNSIDLSSDNNVT 61

Query: 63  LLRQFSYGNGQYDSEAGPSNIGGEE--EDPHQDDNYTNI-----PSDVESKL-LPIWPLT 122
                      ++     +N+G +   E P Q  N T       PS ++  + LP+WP  
Sbjct: 62  APDHHFEDPTIWNISNESNNMGVQPQIEGPSQSQNVTEAENSQRPSCLDGGMSLPVWPPP 121

Query: 123 PLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
             PF C+ CQVLRE +HT+G+ + KLEIHGRLG+I HAI + +  V   +  PQY M +
Sbjct: 122 ITPFSCTYCQVLREIVHTDGICTTKLEIHGRLGVICHAIFQSRNSVQAVSSVPQYHMLD 173

[Close]
BLAST of CSPI06G19120 vs. NCBI nr
Match: gi|700192387|gb|KGN47591.1| (hypothetical protein Csa_6G362980 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 2.2e-93
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1 

Query: 6   MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLR 65
           MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS AEQPAGCGFGNMGMVELLR
Sbjct: 1   MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSTAEQPAGCGFGNMGMVELLR 60

Query: 66  QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV 125
           QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV
Sbjct: 61  QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV 120

Query: 126 LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
           LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
Sbjct: 121 LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 168

[Close]
BLAST of CSPI06G19120 vs. NCBI nr
Match: gi|778722257|ref|XP_011658444.1| (PREDICTED: protein RKD2-like [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 4.9e-93
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 1 

Query: 6   MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLR 65
           MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS AEQPAGCGFGNMGMVELLR
Sbjct: 1   MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSTAEQPAGCGFGNMGMVELLR 60

Query: 66  QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV 125
           QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV
Sbjct: 61  QFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQV 120

Query: 126 LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
           LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Sbjct: 121 LREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFD 168

[Close]
BLAST of CSPI06G19120 vs. NCBI nr
Match: gi|659089471|ref|XP_008445526.1| (PREDICTED: protein RKD2-like isoform X1 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 1 

Query: 1   MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGM 60
           MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGM
Sbjct: 7   MAADPMAAALFDEVEDQDYPYESSINANILNFGNDQNPTLEDLQSTAEQPAGHGFGNMGM 66

Query: 61  VELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLC 120
           VELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIPSDVESKLLPIWPLTPLPFLC
Sbjct: 67  VELLRRFSYGDGQYDSEAGPSNIGGEEEDHQQDDNYMNIPSDVESKLLPIWPLTPLPFLC 126

Query: 121 SCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
           SCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Sbjct: 127 SCCQVLREFLHTNGVNSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFD 179

[Close]
BLAST of CSPI06G19120 vs. NCBI nr
Match: gi|659089473|ref|XP_008445527.1| (PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 1 

Query: 1   MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGM 60
           MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGM
Sbjct: 7   MAADPMAAALFDEVEDQDYPYESSINANILNFGNDQNPTLEDLQSTAEQPAGHGFGNMGM 66

Query: 61  VELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPIWPLTPLPFLC 120
           VELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIPSDVESKLLPIWPLTPLPFLC
Sbjct: 67  VELLRRFSYGDGQYDSEAGPSNIGGEEEDHQQDDNYMNIPSDVESKLLPIWPLTPLPFLC 126

Query: 121 SCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE 174
           SCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Sbjct: 127 SCCQVLREFLHTNGVNSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFD 179

[Close]
BLAST of CSPI06G19120 vs. NCBI nr
Match: gi|743814847|ref|XP_011019796.1| (PREDICTED: uncharacterized protein LOC105122402 [Populus euphratica])

HSP 1 Score: 99.4 bits (246), Expect = 6.7e-18
Identity = 72/204 (35.29%), Postives = 102/204 (50.00%), Query Frame = 1 

Query: 3   ADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS-------MAEQPAGCGF 62
           ADP +   + +      PY+S I+   LNF ND NP+L  L S       + E  +G   
Sbjct: 2   ADPRSVVPYHD------PYDSPIDYEHLNFMNDANPSLAGLSSDNEPTPAIPESFSGSAN 61

Query: 63  GNMGMVE--------LLRQFSYGNGQYDS-EAGPS--NIGGEEEDP-------------H 122
            N  +++        +   F Y N +  S EAGPS  N G     P              
Sbjct: 62  ANANILDPNNPYEDPMAWNFYYENLRVQSHEAGPSHQNQGQSSSGPLPYTPFPNASFPDG 121

Query: 123 QDDNYTNIPSDV--ESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMI 174
           Q  N +    ++  + + + IWP  P+PF C+CCQVLRE +HT+G ++ KLEIHGR+G+I
Sbjct: 122 QTSNASGRSEEIFLDERNIAIWPPEPVPFQCTCCQVLREIIHTDGNYTTKLEIHGRMGII 181

The following BLAST results are available for this feature:
BLAST of CSPI06G19120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G19120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIL1_CUCSA1.5e-9399.40Uncharacterized protein OS=Cucumis sativus GN=Csa_6G362980 PE=4 SV=1[more]
A5AXA9_VITVI2.3e-1734.66Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002228 PE=4 SV=1[more]
A0A061G426_THECC8.2e-1542.86Uncharacterized protein OS=Theobroma cacao GN=TCM_015956 PE=4 SV=1[more]
B9RQU6_RICCO9.1e-1436.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0706580 PE=4 SV=1[more]
A0A067KQE7_JATCU1.0e-1232.40Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07620 PE=4 SV=1[more]
BLAST of CSPI06G19120 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G19120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192387|gb|KGN47591.1|2.2e-9399.40hypothetical protein Csa_6G362980 [Cucumis sativus][more]
gi|778722257|ref|XP_011658444.1|4.9e-9398.81PREDICTED: protein RKD2-like [Cucumis sativus][more]
gi|659089471|ref|XP_008445526.1|4.3e-8993.64PREDICTED: protein RKD2-like isoform X1 [Cucumis melo][more]
gi|659089473|ref|XP_008445527.1|4.3e-8993.64PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo][more]
gi|743814847|ref|XP_011019796.1|6.7e-1835.29PREDICTED: uncharacterized protein LOC105122402 [Populus euphratica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0042393 histone binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G19120.1CSPI06G19120.1mRNA