CSPI06G14200 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G14200
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 12502763 .. 12504166 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATAGCGTGGAAGAGGTTCGATGTAAGGATTATCATATACCACACATTGTTTCATTTTGTAAGAAAATTTATACCCACACCAACCAACAGGCCCTTTTGGGAATGTCCTTTTCAGCTTTTTGGTAGATTCCAAACCAAAGCTATAGTACAATCATATTCATTTTGTTTATTGAAGTCAATAGATCATTCTTTTAACGATTTACATGTTCTATTCCATGAGATTTTTTGCTTTTAATTTATGGAATCTTGAAGATGATTTATTTGATAGAGGAGCCATAATCAACTTTACCATTTGATCACAGTAGCGGATCAAATTATTGTAGAAAATGACAGGCCCAATTGAAGGCCTTACATGCCATTTTCATCAATCTAATCTTATCTATAGACAAATCTATTACTTATTCATTAATTTCTCTTTTAAATTATGATTTTAGCAAGGATTATACTGATCTCAAGTTCTCAATCATCAAAATATTTGGACAATCATAAAAGTTGTTCTCAGCTATTATTTTGTCTATTAAAGCTTAGCTGGATTGCACCAATTGGGCAAATTTCCCCTACAAATCACTTTAGAGTAAAGAGGGGGGAAAAGAAAGGAGAGAAGACAGCAACACAAAAAAGGTTGATAGAATGGCTCAAAATCCTCCTGTTTTGATATTTATTGATACTTATTAACAAAGCTTTGTACAGGTTGGCGAAAGGAACTCTTACTATAATTATAGATTCAATGAGGAAGACATAGCAGGGAAAGAAGCTCAACTATGGAGTCCTCATCAAAGATTTGTTTCTGTATTCCTCGCCACAAAAATGGCCACAAAGCTGATGGAGGATCGGAGAAATCTTCCAAATCTAAGCCTTCTCGTCGCAAATCCCATCGAGACTCAAAAGAAGGTAAGCATTCCTCTAGCAGTGATAGCAGTGGAAATGGAAACGCAGGTGAAGAATGTGCAGCCAGTGCCACTGCCGTGGCTGCTGTTGCGGTCACAGCCGTGACCATGGATGCACTTGACGATGATGGTGGCAGTACCCATGTCCACGGTGGTGAGGGAGGCAGCGGGGCTGGTGGAGACTAGGAAATTGGAGGATTGGAGTTCTTATTTATTCTTTGCCTTTTCTGATTGCATCTGTTTGGTGATTCCCTTCTGATGGTTCTTTGCTGAATTCTGGTTGATGTGTGGGAATTTTATCTTTGCTTGAATTACATTATATGATTATGAGCATTTGGGTTTGAATTTCTTCTACGCTATAATATATATATACATATAGGAAACTTTGTACATCTTGTAATGGTGGCTGTTCTCAACTCTGCTTTGAACTTTTTTTTAGCTCATTGCTTCGCAAGGAATTCAAGGGCACATTTAAGTTGATTTTAC

mRNA sequence

ATGGAGTCCTCATCAAAGATTTGTTTCTGTATTCCTCGCCACAAAAATGGCCACAAAGCTGATGGAGGATCGGAGAAATCTTCCAAATCTAAGCCTTCTCGTCGCAAATCCCATCGAGACTCAAAAGAAGGTAAGCATTCCTCTAGCAGTGATAGCAGTGGAAATGGAAACGCAGGTGAAGAATGTGCAGCCAGTGCCACTGCCGTGGCTGCTGTTGCGGTCACAGCCGTGACCATGGATGCACTTGACGATGATGGTGGCAGTACCCATGTCCACGGTGGTGAGGGAGGCAGCGGGGCTGGTGGAGACTAG

Coding sequence (CDS)

ATGGAGTCCTCATCAAAGATTTGTTTCTGTATTCCTCGCCACAAAAATGGCCACAAAGCTGATGGAGGATCGGAGAAATCTTCCAAATCTAAGCCTTCTCGTCGCAAATCCCATCGAGACTCAAAAGAAGGTAAGCATTCCTCTAGCAGTGATAGCAGTGGAAATGGAAACGCAGGTGAAGAATGTGCAGCCAGTGCCACTGCCGTGGCTGCTGTTGCGGTCACAGCCGTGACCATGGATGCACTTGACGATGATGGTGGCAGTACCCATGTCCACGGTGGTGAGGGAGGCAGCGGGGCTGGTGGAGACTAG
Homology
[Close]
BLAST of CSPI06G14200 vs. TrEMBL
Match: A0A0A0KFD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G188150 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.3e-44
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MESSSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGE 60
           MESSSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGE
Sbjct: 1   MESSSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGE 60

Query: 61  ECAASATAVAAVAVTAVTMDALDDDGGSTHVHGGEGGSGAGGD 104
           ECAASATAVAAVAVTAVTMDALDDDGGSTHVHGGEGGSGAGGD
Sbjct: 61  ECAASATAVAAVAVTAVTMDALDDDGGSTHVHGGEGGSGAGGD 103

[Close]
BLAST of CSPI06G14200 vs. NCBI nr
Match: gi|700191918|gb|KGN47122.1| (hypothetical protein Csa_6G188150 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-44
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MESSSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGE 60
           MESSSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGE
Sbjct: 1   MESSSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGE 60

Query: 61  ECAASATAVAAVAVTAVTMDALDDDGGSTHVHGGEGGSGAGGD 104
           ECAASATAVAAVAVTAVTMDALDDDGGSTHVHGGEGGSGAGGD
Sbjct: 61  ECAASATAVAAVAVTAVTMDALDDDGGSTHVHGGEGGSGAGGD 103

The following BLAST results are available for this feature:
BLAST of CSPI06G14200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G14200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFD0_CUCSA1.3e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G188150 PE=4 SV=1[more]
BLAST of CSPI06G14200 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G14200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191918|gb|KGN47122.1|1.9e-44100.00hypothetical protein Csa_6G188150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G14200.1CSPI06G14200.1mRNA
CSPI06G14200.2CSPI06G14200.2mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G14200CsaV3_6G016580Cucumber (Chinese Long) v3cpicucB364
CSPI06G14200CsaV3_7G010030Cucumber (Chinese Long) v3cpicucB377
CSPI06G14200Carg03338Silver-seed gourdcarcpiB0373
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G14200Silver-seed gourdcarcpiB0104
CSPI06G14200Silver-seed gourdcarcpiB0189
CSPI06G14200Silver-seed gourdcarcpiB0416
CSPI06G14200Silver-seed gourdcarcpiB0953
CSPI06G14200Silver-seed gourdcarcpiB1039
CSPI06G14200Watermelon (97103) v2cpiwmbB451
CSPI06G14200Wax gourdcpiwgoB610
CSPI06G14200Cucumber (Gy14) v1cgycpiB205
CSPI06G14200Cucurbita maxima (Rimu)cmacpiB230
CSPI06G14200Cucurbita maxima (Rimu)cmacpiB559
CSPI06G14200Cucurbita maxima (Rimu)cmacpiB622
CSPI06G14200Cucurbita maxima (Rimu)cmacpiB858
CSPI06G14200Cucurbita moschata (Rifu)cmocpiB217
CSPI06G14200Cucurbita moschata (Rifu)cmocpiB548
CSPI06G14200Cucurbita moschata (Rifu)cmocpiB615
CSPI06G14200Cucurbita moschata (Rifu)cmocpiB841
CSPI06G14200Cucumber (Chinese Long) v2cpicuB314
CSPI06G14200Melon (DHL92) v3.5.1cpimeB434
CSPI06G14200Watermelon (Charleston Gray)cpiwcgB458
CSPI06G14200Watermelon (97103) v1cpiwmB530
CSPI06G14200Cucurbita pepo (Zucchini)cpecpiB292
CSPI06G14200Cucurbita pepo (Zucchini)cpecpiB630
CSPI06G14200Cucurbita pepo (Zucchini)cpecpiB755
CSPI06G14200Cucurbita pepo (Zucchini)cpecpiB882
CSPI06G14200Bottle gourd (USVL1VR-Ls)cpilsiB416
CSPI06G14200Melon (DHL92) v3.6.1cpimedB432
CSPI06G14200Cucumber (Gy14) v2cgybcpiB041
CSPI06G14200Cucumber (Gy14) v2cgybcpiB288