CSPI06G12850 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G12850
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 11224604 .. 11225047 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAAGAGGGATAAAGTGAAATTCAAAGATTGTTTCTTCTTCGCAACACCTCTGCACCACACTCAACCTCTAGATTTGCATTACCCATTTCGATGGCCAGCTTCAGATCATGAAGAACACCCAAAATGTTCAGCAACTTCAGGAAGGAACACAACCATCACAGCAACCACAGACCTCAACCATCTCGAACAACGATATCCAAGTCGGTTTCTAATTTATCCAGATGTCAAGCGCACATCAAAATTAAACTTTAGGCATCCCCTCGCTGAAAGAGACCACGAAAGAGGGGGAGCTGATGCGCATCGCGAACGACCAGGTTAGGACCTACCTCAGATCGCTACCAAGATATCTTAGCGACAAAGAGTCATCACGTTTTCAATTTCATTGGCAGATTCATCAATCCACTCCATCTTCTTTTCCAATGGAGCCACAGAGGAGTAA

mRNA sequence

ATGCCGAAGAGGGATAAAGTGAAATTCAAAGATTGTTTCTTCTTCGCAACACCTCTGCACCACACTCAACCTCTAGATTTGCATTACCCATTTCGATGGCCAGCTTCAGATCATGAAGAACACCCAAAATGTTCAGCAACTTCAGGAAGGAACACAACCATCACAGCAACCACAGACCTCAACCATCTCGAACAACGATATCCAAGTCGGTTTCTAATTTATCCAGATGTCAAGCGCACATCAAAATTAAACTTTAGGCATCCCCTCGCTGAAAGAGACCACGAAAGAGGGGGAGCTGATGCGCATCGCGAACGACCAGATTCATCAATCCACTCCATCTTCTTTTCCAATGGAGCCACAGAGGAGTAA

Coding sequence (CDS)

ATGCCGAAGAGGGATAAAGTGAAATTCAAAGATTGTTTCTTCTTCGCAACACCTCTGCACCACACTCAACCTCTAGATTTGCATTACCCATTTCGATGGCCAGCTTCAGATCATGAAGAACACCCAAAATGTTCAGCAACTTCAGGAAGGAACACAACCATCACAGCAACCACAGACCTCAACCATCTCGAACAACGATATCCAAGTCGGTTTCTAATTTATCCAGATGTCAAGCGCACATCAAAATTAAACTTTAGGCATCCCCTCGCTGAAAGAGACCACGAAAGAGGGGGAGCTGATGCGCATCGCGAACGACCAGATTCATCAATCCACTCCATCTTCTTTTCCAATGGAGCCACAGAGGAGTAA
Homology
[Close]
BLAST of CSPI06G12850 vs. TrEMBL
Match: A0A0A0KBX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G157380 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.3e-58
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MPKRDKVKFKDCFFFATPLHHTQPLDLHYPFRWPASDHEEHPKCSATSGRNTTITATTDL 60
           MPKRDKVKFKDCFFFATPLHHTQPLDLHYPFRWPASDHEEHPKCSATSGRNTTITATTDL
Sbjct: 2   MPKRDKVKFKDCFFFATPLHHTQPLDLHYPFRWPASDHEEHPKCSATSGRNTTITATTDL 61

Query: 61  NHLEQRYPSRFLIYPDVKRTSKLNFRHPLAERDHERGGADAHRERP 107
           NHLEQRYPSRFLIYPDVKRTSKLNFRHPLAERDHERGGADAHRERP
Sbjct: 62  NHLEQRYPSRFLIYPDVKRTSKLNFRHPLAERDHERGGADAHRERP 107

[Close]
BLAST of CSPI06G12850 vs. NCBI nr
Match: gi|700191784|gb|KGN46988.1| (hypothetical protein Csa_6G157380 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.0e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MPKRDKVKFKDCFFFATPLHHTQPLDLHYPFRWPASDHEEHPKCSATSGRNTTITATTDL 60
           MPKRDKVKFKDCFFFATPLHHTQPLDLHYPFRWPASDHEEHPKCSATSGRNTTITATTDL
Sbjct: 2   MPKRDKVKFKDCFFFATPLHHTQPLDLHYPFRWPASDHEEHPKCSATSGRNTTITATTDL 61

Query: 61  NHLEQRYPSRFLIYPDVKRTSKLNFRHPLAERDHERGGADAHRERP 107
           NHLEQRYPSRFLIYPDVKRTSKLNFRHPLAERDHERGGADAHRERP
Sbjct: 62  NHLEQRYPSRFLIYPDVKRTSKLNFRHPLAERDHERGGADAHRERP 107

The following BLAST results are available for this feature:
BLAST of CSPI06G12850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G12850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBX2_CUCSA7.3e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G157380 PE=4 SV=1[more]
BLAST of CSPI06G12850 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G12850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191784|gb|KGN46988.1|1.0e-57100.00hypothetical protein Csa_6G157380 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G12850.1CSPI06G12850.1mRNA