CSPI06G09040 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G09040
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Glucan endo-1,3-beta-glucosidase-like protein
Location	Chr6 : 7611001 .. 7612878 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAACATTATCCCATGTGCTAGCTCGTCGACAGATGCGTCTAAAAACGCACTATTTTGTGGCCATTATACTTTCTGTACTTAGATAGATCTCTGTCTTCCTCTCTTTTTCTCTGCCATGGTTGCTCTGTTGACTAAAACACTTCTCGTTCTGCTGTTACTGTCAACAATTCACCAAAACACAGGTAACAACCAATACCCATTTGAAATTGCAGCTAAATAATTGCTTACTTCCAATTAATGAACTTTTCTCTTCACAACCAATGGATGGGGGGCATCAGAGAAGTTTGTTTCCCATTTTTTCCAATCCAAATTATTTATTTATGTGAATATGGCCACCAAGCGTTTGTTAAAATGTCTAGGTGGGGAATTTGAGCAATGGTGTGTAGCAGATGAGCAGACCCCAGATGATGAATTACAAATGGCTTTGGATTGGGCATGTGGAAGAGGAGGTGCTAACTGCAGCAGCATCCAACCAAACCAGCCTTGCTTTAACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAATAACTACTTTCAGAGTTTCAAGCACCAAGGTGGATCCTGTTTCTTCAAAGGAGCTGCCATCATTACAGAGCTTGATCCTAGTAAGCTACATTTTACTGTCTACCATATCTAATTTATGATTCTCTTCCTTTCTTGCAAAAGTTACCCAGCTGCTGTTTATTTTGGATTATACTATCTAGAAAATGCTCCAAAGGGATTTGCCATCATTGCATGCATTTGTCTTTTTCTTACATTATTGAGACAATACTTTGAACCCATGTGCATGCCATGAAGCAGCATGTTGTGTGATACTTATTTACTCAAGGGAAAAGAGGTTAAAGATCATTATAAAAAGATTCAAAGGTTAATAAGATTGGATGTCTGTCGAGCAATGGAGAGAATCATCCCATTTCCTTCATTTTTTTTATCAACAATGTTGATTCTCAACTAAAATAATAAGAAAGTAAGCTTTATGGCAAAAGAACCACTTTGATCCTTTATCACCTCGAGTGCCTCAAAAATTGTTCAGCTGAACCTTTATTAGTTTAATGTATTGTTATTATTTAGTTAGCAAGTCGCAAAAATACACAGAAAATAAACATGAAATTCTGAAAATCTGAAAATCTTATCCTCATTTCCATTTATTTCAAGATGAATTCTTCCCTAGACTCATCCTCATTTATAATTGAAATGAAAATTAGTTGTTTCTAAACAGTAGATGGAAAAAACTAAAAAGTAGTTAATGGAGACAATCCATCTTTTTATTCACCTCTCCAAATCATAAGATGATCCTCTAAAATTATTTTTGGTTGGTATCGTACAAGTATGTTCTCACTGTGACAAATAGAAAAGAAATCTATGTAAACTTAAGATTATTTATTTATTTAGATCTTGTTTGATAATCATTTAGTTTTTTTTTTAAAAAAAATCATGATATCTCATGAGTAAACATTTAACAAATTTGGAAGAACAAAGGGAAGTTGTTAAAAAGGAAATATTTTGGTGCAGGTCATGGGTCTTGCCAGTATGAGTTTATTCCATAGTGAGAATGAGAATGAGAAGAGATCAGGGAATAAAATCAGAGGAAAGAGATTGGTTTGAAAGTAAGGACTAAGGAGATTAAATCCCATGGAAGATTGTTATCTAAGTTCTTTACCTTGTTTCATTGTACTTTGAACCATAGCACAATAAGACTTTTGTCTTTGCCTAAGCCACCATTTATTTCTTTTAATTTTTTTACTTCATTATATTCTTTTCTTTGTGTTTATGTTTGCCTTTTCTGGTAGATTCTTGTAAGATATAATTGATTTTCTTACTGATGATTCTCTGGTGCTCAACGTTCTTGGTATTTGGTTGTTTTGTTTT

mRNA sequence

ATGGTTGCTCTGTTGACTAAAACACTTCTCGTTCTGCTGTTACTGTCAACAATTCACCAAAACACAGGTGGGGAATTTGAGCAATGGTGTGTAGCAGATGAGCAGACCCCAGATGATGAATTACAAATGGCTTTGGATTGGGCATGTGGAAGAGGAGGTGCTAACTGCAGCAGCATCCAACCAAACCAGCCTTGCTTTAACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAATAACTACTTTCAGAGTTTCAAGCACCAAGGTGGATCCTGTTTCTTCAAAGGAGCTGCCATCATTACAGAGCTTGATCCTAGTCATGGGTCTTGCCAGTATGAGTTTATTCCATAG

Coding sequence (CDS)

ATGGTTGCTCTGTTGACTAAAACACTTCTCGTTCTGCTGTTACTGTCAACAATTCACCAAAACACAGGTGGGGAATTTGAGCAATGGTGTGTAGCAGATGAGCAGACCCCAGATGATGAATTACAAATGGCTTTGGATTGGGCATGTGGAAGAGGAGGTGCTAACTGCAGCAGCATCCAACCAAACCAGCCTTGCTTTAACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAATAACTACTTTCAGAGTTTCAAGCACCAAGGTGGATCCTGTTTCTTCAAAGGAGCTGCCATCATTACAGAGCTTGATCCTAGTCATGGGTCTTGCCAGTATGAGTTTATTCCATAG

Homology

[Close]

BLAST of CSPI06G09040 vs. Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.8e-25
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 1


Query: 17  TIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHAS 76
           TI    GG  ++WC+A  Q    ELQ ALDWACG G  +CS++QP+QPCF P+TV  HAS
Sbjct: 379 TIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHAS 438

Query: 77  FAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           +AFN Y+Q        C F GA++  + DPS+G+C Y   P
Sbjct: 439 YAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CSPI06G09040 vs. Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.5e-24
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 1


Query: 29  WCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFNNYFQSFKH 88
           +CVA     DD+L   L+WACG+G ANC++IQP QPC+ PN VK HASFAFN+Y+Q  K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 89  QGGSCFFKGAAIITELDPSHGSCQY 114
            GG+C F G AI T  DPS+ +C Y
Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of CSPI06G09040 vs. Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-23
Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 27  EQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFNNYFQSF 86
           + +C+A +      LQ ALDWACG G +NCS IQP + C+ PN VK HASFAFN+Y+Q  
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 87  KHQGGSCFFKGAAIITELDPSHGSC 112
               GSC FKG A+IT  DPSHGSC
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSC 463

[Close]

BLAST of CSPI06G09040 vs. Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-21
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1


Query: 21  NTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFN 80
           N+ G    WC+A  +  + +L+ ALDWACG G  +C++IQP+QPCF P+T+  HASF FN
Sbjct: 361 NSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFN 420

Query: 81  NYFQSFKHQGGSCFFKGAAIITELDPSHGSCQY 114
           +YFQ  +    +C F GA +    DPS+  C Y
Sbjct: 421 SYFQQNRATDVACSFGGAGVKVNKDPSYDKCIY 453

[Close]

BLAST of CSPI06G09040 vs. Swiss-Prot
Match: PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 4.1e-19
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1


Query: 2   VALLTKTLLVLLLLSTIHQNTGGEF---EQWCVADEQTPDDELQMALDWACGRGGANCSS 61
           +++L  T  +L++++T     GG+    E WCVA     D  LQ A++WACG+GGA+C  
Sbjct: 13  LSILAATAAMLMVITTAQ--IGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGP 72

Query: 62  IQPNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQY 114
           IQ   PC +P  V+  ASF FNNY+     +  +C F   A +T L+PS G+C+Y
Sbjct: 73  IQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125

[Close]

BLAST of CSPI06G09040 vs. TrEMBL
Match: A0A0A0KDX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G110840 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 8.5e-64
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ
Sbjct: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 117

[Close]

BLAST of CSPI06G09040 vs. TrEMBL
Match: B9IAQ9_POPTR (Glycosyl hydrolase family protein OS=Populus trichocarpa GN=POPTR_0014s16250g PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-46
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           M  L  +T+L LL+LS   + + GE EQWC+ADEQTPDDELQ+ALDWACG+GGA+CS IQ
Sbjct: 1   MPILWKRTMLALLILSIAPRKSDGELEQWCIADEQTPDDELQIALDWACGKGGADCSKIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
            NQPC+ PNTV+DHAS+AFNNYFQ FKH+GGSC+FKGAAIITELDPSH SCQYEF P
Sbjct: 61  VNQPCYLPNTVRDHASYAFNNYFQKFKHKGGSCYFKGAAIITELDPSHSSCQYEFHP 117

[Close]

BLAST of CSPI06G09040 vs. TrEMBL
Match: A0A061DL58_THECC (Glycosyl hydrolase 1 OS=Theobroma cacao GN=TCM_002325 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.1e-46
Identity = 86/117 (73.50%), Postives = 102/117 (87.18%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           M  LL +  L+LLLLS I Q + GEFEQWC+ADEQTPDDELQ ALDWACG+GGA+CS IQ
Sbjct: 1   MSLLLIRITLLLLLLSMIPQKSVGEFEQWCIADEQTPDDELQAALDWACGKGGADCSKIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
            NQPC+ PNT+++HAS+AFN+YFQ FKH+GGSC+FKGAA+ITELDPS+ SCQYEFIP
Sbjct: 61  VNQPCYFPNTMRNHASYAFNDYFQKFKHKGGSCYFKGAAMITELDPSYNSCQYEFIP 117

[Close]

BLAST of CSPI06G09040 vs. TrEMBL
Match: M5XAQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025080mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 9.8e-44
Identity = 83/117 (70.94%), Postives = 95/117 (81.20%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           M  +L   +L LL LS     +G EFEQWCVADEQTPDDELQ A+DWACG GGA+CS IQ
Sbjct: 1   MSTVLIWLILALLCLSLAPPKSGAEFEQWCVADEQTPDDELQAAMDWACGGGGADCSKIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
            NQPC+ PNT+KDHAS+AFN+YFQ FKH+GGSC+FK AA+ITELDPSH SC YEFIP
Sbjct: 61  VNQPCYFPNTLKDHASYAFNSYFQKFKHKGGSCYFKAAALITELDPSHASCHYEFIP 117

[Close]

BLAST of CSPI06G09040 vs. TrEMBL
Match: A0A067K4D2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18472 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-43
Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 2   VALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQP 61
           + LL  TL+ LL++S     + GE EQWC+ADEQTPD+ELQMALDWACGRGGA+CS IQ 
Sbjct: 3   IFLLRLTLVALLVMSIAPLKSDGELEQWCIADEQTPDEELQMALDWACGRGGADCSMIQV 62

Query: 62  NQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           N+PC+ PNTV+ HASFAFN+YFQ FKH GGSC+F+GAAI TELDPSH SC YEFIP
Sbjct: 63  NKPCYFPNTVRAHASFAFNSYFQKFKHNGGSCYFRGAAISTELDPSHDSCHYEFIP 118

[Close]

BLAST of CSPI06G09040 vs. TAIR10
Match: AT5G35740.1 (AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 174.5 bits (441), Expect = 3.9e-44
Identity = 79/119 (66.39%), Postives = 101/119 (84.87%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLS-TIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSI 60
           M   L + LL LL+++ T+ + +  E EQWC+ADEQTPDDELQ ALDWACG+GGA+CS +
Sbjct: 1   MSTFLIRILLPLLIIAMTLPRRSEAESEQWCIADEQTPDDELQAALDWACGKGGADCSKM 60

Query: 61  QP-NQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           Q  NQPCF PNT++DHASFAFN+Y+Q++K++GGSC+FKGAA+ITELDPSHGSCQYE+ P
Sbjct: 61  QQENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119

[Close]

BLAST of CSPI06G09040 vs. TAIR10
Match: AT2G04910.1 (AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 8.5e-31
Identity = 56/83 (67.47%), Postives = 64/83 (77.11%), Query Frame = 1


Query: 25  EFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFNNYFQ 84
           EF QWCVAD Q PD+ +Q A+DWAC  GGA+CS+IQPNQPCF PNTVKDHAS  FNNY+Q
Sbjct: 11  EFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNYYQ 70

Query: 85  SFKHQGGSCFFKGAAIITELDPS 108
            +K  GGSC F   A IT+ DPS
Sbjct: 71  RYKRNGGSCNFNSTAFITQTDPS 93

[Close]

BLAST of CSPI06G09040 vs. TAIR10
Match: AT4G29360.1 (AT4G29360.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 115.5 bits (288), Expect = 2.2e-26
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 1


Query: 17  TIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHAS 76
           TI    GG  ++WC+A  Q    ELQ ALDWACG G  +CS++QP+QPCF P+TV  HAS
Sbjct: 379 TIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHAS 438

Query: 77  FAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           +AFN Y+Q        C F GA++  + DPS+G+C Y   P
Sbjct: 439 YAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CSPI06G09040 vs. TAIR10
Match: AT3G13560.1 (AT3G13560.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 111.7 bits (278), Expect = 3.1e-25
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 1


Query: 29  WCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFNNYFQSFKH 88
           +CVA     DD+L   L+WACG+G ANC++IQP QPC+ PN VK HASFAFN+Y+Q  K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 89  QGGSCFFKGAAIITELDPSHGSCQY 114
            GG+C F G AI T  DPS+ +C Y
Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of CSPI06G09040 vs. TAIR10
Match: AT1G11820.2 (AT1G11820.2 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 110.2 bits (274), Expect = 9.1e-25
Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 27  EQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFNNYFQSF 86
           + +C+A +      LQ ALDWACG G +NCS IQP + C+ PN VK HASFAFN+Y+Q  
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 87  KHQGGSCFFKGAAIITELDPSHGSC 112
               GSC FKG A+IT  DPSHGSC
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSC 463

[Close]

BLAST of CSPI06G09040 vs. NCBI nr
Match: gi|449444496|ref|XP_004140010.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-63
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ
Sbjct: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 117

[Close]

BLAST of CSPI06G09040 vs. NCBI nr
Match: gi|659128386|ref|XP_008464180.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-62
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           MVALLTKTLL+LLLLSTIHQNTGGEFEQWCVADEQ PDDELQMALDWACG+GGANCSSIQ
Sbjct: 1   MVALLTKTLLILLLLSTIHQNTGGEFEQWCVADEQIPDDELQMALDWACGKGGANCSSIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 117

[Close]

BLAST of CSPI06G09040 vs. NCBI nr
Match: gi|659128388|ref|XP_008464181.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X2 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 6.3e-52
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 1


Query: 23  GGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQPNQPCFNPNTVKDHASFAFNNY 82
           GGEFEQWCVADEQ PDDELQMALDWACG+GGANCSSIQPNQPCFNPNTVKDHASFAFNNY
Sbjct: 19  GGEFEQWCVADEQIPDDELQMALDWACGKGGANCSSIQPNQPCFNPNTVKDHASFAFNNY 78

Query: 83  FQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
           FQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Sbjct: 79  FQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 113

[Close]

BLAST of CSPI06G09040 vs. NCBI nr
Match: gi|743910855|ref|XP_011048952.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Populus euphratica])

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-46
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           M  L  +T+L LL+LS   + + GE EQWC+ADEQTPDDELQ ALDWACG+GGA+CS IQ
Sbjct: 61  MPILWKRTMLALLILSITPRKSDGELEQWCIADEQTPDDELQRALDWACGKGGADCSKIQ 120

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
            NQPC+ PNTV+DHAS+AFNNYFQ FKH+GGSC+FKGAAIITELDPSHGSCQYEF P
Sbjct: 121 VNQPCYLPNTVRDHASYAFNNYFQKFKHKGGSCYFKGAAIITELDPSHGSCQYEFHP 177

[Close]

BLAST of CSPI06G09040 vs. NCBI nr
Match: gi|224131794|ref|XP_002321180.1| (glycosyl hydrolase family protein [Populus trichocarpa])

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60
           M  L  +T+L LL+LS   + + GE EQWC+ADEQTPDDELQ+ALDWACG+GGA+CS IQ
Sbjct: 1   MPILWKRTMLALLILSIAPRKSDGELEQWCIADEQTPDDELQIALDWACGKGGADCSKIQ 60

Query: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP 118
            NQPC+ PNTV+DHAS+AFNNYFQ FKH+GGSC+FKGAAIITELDPSH SCQYEF P
Sbjct: 61  VNQPCYLPNTVRDHASYAFNNYFQKFKHKGGSCYFKGAAIITELDPSHSSCQYEFHP 117

The following BLAST results are available for this feature:

BLAST of CSPI06G09040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
E1312_ARATH	3.8e-25	48.51	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV...	[more]
E134_ARATH	5.5e-24	56.47	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=...	[more]
E131_ARATH	1.6e-23	56.47	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=...	[more]
E1313_ARATH	1.2e-21	45.16	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV...	[more]
PDCB5_ARATH	4.1e-19	40.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV...	[more]

BLAST of CSPI06G09040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDX6_CUCSA	8.5e-64	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G110840 PE=4 SV=1	[more]
B9IAQ9_POPTR	2.1e-46	73.50	Glycosyl hydrolase family protein OS=Populus trichocarpa GN=POPTR_0014s16250g PE...	[more]
A0A061DL58_THECC	6.1e-46	73.50	Glycosyl hydrolase 1 OS=Theobroma cacao GN=TCM_002325 PE=4 SV=1	[more]
M5XAQ0_PRUPE	9.8e-44	70.94	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025080mg PE=4 SV=1	[more]
A0A067K4D2_JATCU	1.7e-43	70.69	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18472 PE=4 SV=1	[more]

BLAST of CSPI06G09040 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35740.1	3.9e-44	66.39	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	8.5e-31	67.47	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G29360.1	2.2e-26	48.51	O-Glycosyl hydrolases family 17 protein	[more]
AT3G13560.1	3.1e-25	56.47	O-Glycosyl hydrolases family 17 protein	[more]
AT1G11820.2	9.1e-25	56.47	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of CSPI06G09040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444496\|ref\|XP_004140010.1\|	1.2e-63	100.00	PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Cucumis sativus]	[more]
gi\|659128386\|ref\|XP_008464180.1\|	1.8e-62	97.44	PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo]	[more]
gi\|659128388\|ref\|XP_008464181.1\|	6.3e-52	97.89	PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X2 [Cucumis melo]	[more]
gi\|743910855\|ref\|XP_011048952.1\|	1.0e-46	74.36	PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Populus euphratica]	[more]
gi\|224131794\|ref\|XP_002321180.1\|	3.0e-46	73.50	glycosyl hydrolase family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G09040.1	CSPI06G09040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 28..99 score: 3.9
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 28..113 score: 1.2
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 1..117 score: 2.3
None	No IPR available	PANTHER	PTHR32227:SF60	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN	coord: 1..117 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G09040	Cla001408	Watermelon (97103) v1	cpiwmB547
CSPI06G09040	Csa6G110840	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G09040	MELO3C025984	Melon (DHL92) v3.5.1	cpimeB419
CSPI06G09040	ClCG02G009390	Watermelon (Charleston Gray)	cpiwcgB473
CSPI06G09040	Lsi10G000560	Bottle gourd (USVL1VR-Ls)	cpilsiB418
CSPI06G09040	MELO3C025984.2	Melon (DHL92) v3.6.1	cpimedB414
CSPI06G09040	CsaV3_6G009430	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G09040	Cla97C02G035740	Watermelon (97103) v2	cpiwmbB466
CSPI06G09040	Bhi10G001033	Wax gourd	cpiwgoB613
CSPI06G09040	Cucsa.120380	Cucumber (Gy14) v1	cgycpiB156
CSPI06G09040	CmaCh02G002190	Cucurbita maxima (Rimu)	cmacpiB623
CSPI06G09040	CmoCh02G002250	Cucurbita moschata (Rifu)	cmocpiB616
CSPI06G09040	Cp4.1LG05g13890	Cucurbita pepo (Zucchini)	cpecpiB757
CSPI06G09040	CsGy6G009190	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G09040	Carg05146	Silver-seed gourd	carcpiB0843

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G09040	Silver-seed gourd	carcpiB0234
CSPI06G09040	Silver-seed gourd	carcpiB0381
CSPI06G09040	Cucumber (Chinese Long) v3	cpicucB375
CSPI06G09040	Watermelon (97103) v2	cpiwmbB456
CSPI06G09040	Wax gourd	cpiwgoB566
CSPI06G09040	Wild cucumber (PI 183967)	cpicpiB141
CSPI06G09040	Wild cucumber (PI 183967)	cpicpiB189
CSPI06G09040	Cucurbita maxima (Rimu)	cmacpiB527
CSPI06G09040	Cucurbita maxima (Rimu)	cmacpiB561
CSPI06G09040	Cucurbita moschata (Rifu)	cmocpiB520
CSPI06G09040	Cucurbita moschata (Rifu)	cmocpiB551
CSPI06G09040	Cucumber (Chinese Long) v2	cpicuB296
CSPI06G09040	Melon (DHL92) v3.5.1	cpimeB457
CSPI06G09040	Melon (DHL92) v3.5.1	cpimeB499
CSPI06G09040	Watermelon (Charleston Gray)	cpiwcgB448
CSPI06G09040	Watermelon (Charleston Gray)	cpiwcgB465
CSPI06G09040	Watermelon (97103) v1	cpiwmB466
CSPI06G09040	Watermelon (97103) v1	cpiwmB535
CSPI06G09040	Cucurbita pepo (Zucchini)	cpecpiB251
CSPI06G09040	Cucurbita pepo (Zucchini)	cpecpiB294
CSPI06G09040	Bottle gourd (USVL1VR-Ls)	cpilsiB432
CSPI06G09040	Melon (DHL92) v3.6.1	cpimedB450
CSPI06G09040	Cucumber (Gy14) v2	cgybcpiB151