CSPI06G02860 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCCATGGCCATTCTCTCCAACTTCTTAAACTCTTCATCTCCGCTGCAATCTGTTACCACGGCCACCACCATAGAATCCTTAGAATCATCTATTCATGACGTCGTGAAACTCTATGAAAGGCGTCGAAAATGGCGAGCTCTCTTCTTCTCCCCCATTCCAAATAACTTTGACGCATTTTCGTCATGGAGAGTCCATTTAATCACTTTCCTTGAATCCACACCTGCTCATATCATCACCATTTTCCTCCTCGTAATGGACCTTATCATCACCGTCCTCGAACTTTCGTCTTCGTTAATATCTTGTGGCTCACACGGGAAAGATGAAGAAAAAGCTTCGTACTTTCATTGGGTGAGCATTTCCATCTTGAGCTTTCTCTCTGCAAAGACGGCAGCTCTGATGCTGGGGTTGGGTCGTTCGTTTTTTAGACGACCAGGTTGCATCGTGGATGGCGTGGTGGCCATTGTGGCGTTGGTTTTGGAGGTGGTGGCGGAGAGGAAAGGGGGCGGAGTGATAATGGTGGCGAGTTTGTGGAGGCTTGTAAGGGTGGTGGAGAGTGCTTTTGAGATAAGTGATGATACCATTGAAGTGAAGATTGAAGGAATAGTTTGGGAGTTAGAGAAGATGAAAGAAGAAATAAGAAGAGAGAAAGAAAAGGATACGATAGAGATGCTTTAAGGGAAGAGTTGAATC ATGGCCATTCTCTCCAACTTCTTAAACTCTTCATCTCCGCTGCAATCTGTTACCACGGCCACCACCATAGAATCCTTAGAATCATCTATTCATGACGTCGTGAAACTCTATGAAAGGCGTCGAAAATGGCGAGCTCTCTTCTTCTCCCCCATTCCAAATAACTTTGACGCATTTTCGTCATGGAGAGTCCATTTAATCACTTTCCTTGAATCCACACCTGCTCATATCATCACCATTTTCCTCCTCGTAATGGACCTTATCATCACCGTCCTCGAACTTTCGTCTTCGTTAATATCTTGTGGCTCACACGGGAAAGATGAAGAAAAAGCTTCGTACTTTCATTGGGTGAGCATTTCCATCTTGAGCTTTCTCTCTGCAAAGACGGCAGCTCTGATGCTGGGGTTGGGTCGTTCGTTTTTTAGACGACCAGGTTGCATCGTGGATGGCGTGGTGGCCATTGTGGCGTTGGTTTTGGAGGTGGTGGCGGAGAGGAAAGGGGGCGGAGTGATAATGGTGGCGAGTTTGTGGAGGCTTGTAAGGGTGGTGGAGAGTGCTTTTGAGATAAGTGATGATACCATTGAAGTGAAGATTGAAGGAATAGTTTGGGAGTTAGAGAAGATGAAAGAAGAAATAAGAAGAGAGAAAGAAAAGGATACGATAGAGATGCTTTAA ATGGCCATTCTCTCCAACTTCTTAAACTCTTCATCTCCGCTGCAATCTGTTACCACGGCCACCACCATAGAATCCTTAGAATCATCTATTCATGACGTCGTGAAACTCTATGAAAGGCGTCGAAAATGGCGAGCTCTCTTCTTCTCCCCCATTCCAAATAACTTTGACGCATTTTCGTCATGGAGAGTCCATTTAATCACTTTCCTTGAATCCACACCTGCTCATATCATCACCATTTTCCTCCTCGTAATGGACCTTATCATCACCGTCCTCGAACTTTCGTCTTCGTTAATATCTTGTGGCTCACACGGGAAAGATGAAGAAAAAGCTTCGTACTTTCATTGGGTGAGCATTTCCATCTTGAGCTTTCTCTCTGCAAAGACGGCAGCTCTGATGCTGGGGTTGGGTCGTTCGTTTTTTAGACGACCAGGTTGCATCGTGGATGGCGTGGTGGCCATTGTGGCGTTGGTTTTGGAGGTGGTGGCGGAGAGGAAAGGGGGCGGAGTGATAATGGTGGCGAGTTTGTGGAGGCTTGTAAGGGTGGTGGAGAGTGCTTTTGAGATAAGTGATGATACCATTGAAGTGAAGATTGAAGGAATAGTTTGGGAGTTAGAGAAGATGAAAGAAGAAATAAGAAGAGAGAAAGAAAAGGATACGATAGAGATGCTTTAA
BLAST of CSPI06G02860 vs. TrEMBL
Match: A0A0A0KDR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022330 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 4.5e-114 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 1
BLAST of CSPI06G02860 vs. TrEMBL
Match: A0A067L074_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05777 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 8.1e-47 Identity = 110/209 (52.63%), Postives = 149/209 (71.29%), Query Frame = 1
BLAST of CSPI06G02860 vs. TrEMBL
Match: A0A166AIK2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_010060 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.8e-45 Identity = 103/197 (52.28%), Postives = 141/197 (71.57%), Query Frame = 1
BLAST of CSPI06G02860 vs. TrEMBL
Match: K7LGH7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G276700 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.3e-44 Identity = 106/222 (47.75%), Postives = 150/222 (67.57%), Query Frame = 1
BLAST of CSPI06G02860 vs. TrEMBL
Match: A0A0B2RB95_GLYSO (Voltage-gated hydrogen channel 1 OS=Glycine soja GN=glysoja_005243 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.2e-44 Identity = 104/208 (50.00%), Postives = 143/208 (68.75%), Query Frame = 1
BLAST of CSPI06G02860 vs. TAIR10
Match: AT1G10800.1 (AT1G10800.1 unknown protein) HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21 Identity = 45/83 (54.22%), Postives = 71/83 (85.54%), Query Frame = 1
BLAST of CSPI06G02860 vs. NCBI nr
Match: gi|700190717|gb|KGN45921.1| (hypothetical protein Csa_6G022330 [Cucumis sativus]) HSP 1 Score: 418.7 bits (1075), Expect = 6.4e-114 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 1
BLAST of CSPI06G02860 vs. NCBI nr
Match: gi|659128695|ref|XP_008464327.1| (PREDICTED: voltage-gated hydrogen channel 1 [Cucumis melo]) HSP 1 Score: 389.8 bits (1000), Expect = 3.2e-105 Identity = 206/224 (91.96%), Postives = 215/224 (95.98%), Query Frame = 1
BLAST of CSPI06G02860 vs. NCBI nr
Match: gi|778709943|ref|XP_011656484.1| (PREDICTED: voltage-gated hydrogen channel 1 [Cucumis sativus]) HSP 1 Score: 262.3 bits (669), Expect = 7.7e-67 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of CSPI06G02860 vs. NCBI nr
Match: gi|802599797|ref|XP_012072600.1| (PREDICTED: uncharacterized protein LOC105634359 [Jatropha curcas]) HSP 1 Score: 195.7 bits (496), Expect = 8.8e-47 Identity = 115/218 (52.75%), Postives = 153/218 (70.18%), Query Frame = 1
BLAST of CSPI06G02860 vs. NCBI nr
Match: gi|643730407|gb|KDP37895.1| (hypothetical protein JCGZ_05777 [Jatropha curcas]) HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46 Identity = 110/209 (52.63%), Postives = 149/209 (71.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|