CSPI06G01840 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTGAACACCATCTCACAGAAGAAAAGAAACATGATGATGAAGCTGCCAACAAGGAAGAAAGCTCCAAAGATGATCCTAGCCATGTAGTTTGGATCACATATGATGGACTTCTTATTTCTTGGCTATTGGAGATAATCTCAGAAGATGTTTTCAATATGATAGAAGGAACAAATACGACATTCCCGGTTTGAAAATCATTAGAAAATCAAATGCTTACAATGACAAAAGAAAGTGAAATCCATGTAAGTGAAACTCTTCTCACATTGAAGAAGGGATTCTCAACTCTTGATGAACATTTAAAAAAAATTAAACATCTCTGTGATAAACTAGCTGCCATGAAGAAACCACATGATGATGTTATTAAAGTGTTTCGTCTTGCTAGAGGCTTAGGATCTCGATACCAAGGTTTTCGAACAACAATGTTATCAAAACCAGCAAATCCCTCTTTCAACCAATCTGTTGTGGTTGTTAAAGCACATGATGAAATGTTGTCTAGTGAACTTGAAGAAGAAAATTTTGTGCAAATCAATCATGCTCAAGCTTTTTACGACCAAAAAGGTCGTAATAGAGGACGTGGGAGACAATTCCTCTTCTCGTGGAAGAGGTTTTCCTTAAAAGCAAATTTCAAGGAAATACAAGCTTCTAGCAAGCATCAAAATCAACCTTGA ATGGGTATTGAACACCATCTCACAGAAGAAAAGAAACATGATGATGAAGCTGCCAACAAGGAAGAAAGCTCCAAAGATGATCCTAGCCATGTAGTTTGGATCACATATGATGGACTTCTTATTTCTTGGCTATTGGAGATAATCTCAGAAGATGTTTTCAATATGATAGAAGGAACAAATACGACATTCCCGAAGGGATTCTCAACTCTTGATGAACATTTAAAAAAAATTAAACATCTCTGTGATAAACTAGCTGCCATGAAGAAACCACATGATGATGTTATTAAAGTGTTTCGTCTTGCTAGAGGCTTAGGATCTCGATACCAAGGTTTTCGAACAACAATGTTATCAAAACCAGCAAATCCCTCTTTCAACCAATCTGTTGTGGTTGTTAAAGCACATGATGAAATGTTGTCTAGTGAACTTGAAGAAGAAAATTTTGTGCAAATCAATCATGCTCAAGCTTTTTACGACCAAAAAGGTCGTAATAGAGGACGTGGGAGACAATTCCTCTTCTCGTGGAAGAGGTTTTCCTTAAAAGCAAATTTCAAGGAAATACAAGCTTCTAGCAAGCATCAAAATCAACCTTGA ATGGGTATTGAACACCATCTCACAGAAGAAAAGAAACATGATGATGAAGCTGCCAACAAGGAAGAAAGCTCCAAAGATGATCCTAGCCATGTAGTTTGGATCACATATGATGGACTTCTTATTTCTTGGCTATTGGAGATAATCTCAGAAGATGTTTTCAATATGATAGAAGGAACAAATACGACATTCCCGAAGGGATTCTCAACTCTTGATGAACATTTAAAAAAAATTAAACATCTCTGTGATAAACTAGCTGCCATGAAGAAACCACATGATGATGTTATTAAAGTGTTTCGTCTTGCTAGAGGCTTAGGATCTCGATACCAAGGTTTTCGAACAACAATGTTATCAAAACCAGCAAATCCCTCTTTCAACCAATCTGTTGTGGTTGTTAAAGCACATGATGAAATGTTGTCTAGTGAACTTGAAGAAGAAAATTTTGTGCAAATCAATCATGCTCAAGCTTTTTACGACCAAAAAGGTCGTAATAGAGGACGTGGGAGACAATTCCTCTTCTCGTGGAAGAGGTTTTCCTTAAAAGCAAATTTCAAGGAAATACAAGCTTCTAGCAAGCATCAAAATCAACCTTGA
BLAST of CSPI06G01840 vs. TrEMBL
Match: A0A0A0K7S3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G012300 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 5.7e-105 Identity = 192/196 (97.96%), Postives = 194/196 (98.98%), Query Frame = 1
BLAST of CSPI06G01840 vs. TrEMBL
Match: A5BC00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007944 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32 Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 1
BLAST of CSPI06G01840 vs. TrEMBL
Match: A5AU03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013750 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.1e-21 Identity = 58/152 (38.16%), Postives = 86/152 (56.58%), Query Frame = 1
BLAST of CSPI06G01840 vs. TrEMBL
Match: A5BKK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021483 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.6e-20 Identity = 55/141 (39.01%), Postives = 85/141 (60.28%), Query Frame = 1
BLAST of CSPI06G01840 vs. TrEMBL
Match: A5AKF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032723 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18 Identity = 58/161 (36.02%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of CSPI06G01840 vs. NCBI nr
Match: gi|700190601|gb|KGN45805.1| (hypothetical protein Csa_6G012300 [Cucumis sativus]) HSP 1 Score: 388.3 bits (996), Expect = 8.2e-105 Identity = 192/196 (97.96%), Postives = 194/196 (98.98%), Query Frame = 1
BLAST of CSPI06G01840 vs. NCBI nr
Match: gi|147798514|emb|CAN74381.1| (hypothetical protein VITISV_007944 [Vitis vinifera]) HSP 1 Score: 146.7 bits (369), Expect = 4.1e-32 Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 1
BLAST of CSPI06G01840 vs. NCBI nr
Match: gi|568828157|ref|XP_006468411.1| (PREDICTED: uncharacterized protein LOC102612615 isoform X1 [Citrus sinensis]) HSP 1 Score: 142.5 bits (358), Expect = 7.8e-31 Identity = 77/198 (38.89%), Postives = 113/198 (57.07%), Query Frame = 1
BLAST of CSPI06G01840 vs. NCBI nr
Match: gi|568828159|ref|XP_006468412.1| (PREDICTED: uncharacterized protein LOC102612615 isoform X2 [Citrus sinensis]) HSP 1 Score: 142.5 bits (358), Expect = 7.8e-31 Identity = 77/198 (38.89%), Postives = 113/198 (57.07%), Query Frame = 1
BLAST of CSPI06G01840 vs. NCBI nr
Match: gi|848919940|ref|XP_012856951.1| (PREDICTED: uncharacterized protein LOC105976216 [Erythranthe guttata]) HSP 1 Score: 119.4 bits (298), Expect = 7.1e-24 Identity = 73/200 (36.50%), Postives = 105/200 (52.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |