CSPI05G29960 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTGTAATGGTTTGTTGTATATCTGCAAGTTTATTTTTGACTCTCTATGTGAAGGCATATTAAATCCGATGACAAATGAATTTGTGGAAATTCCTCCACCCGATATAGAATTAGATGTTCACTGCGTTGGTTTTGGTTTCAGCCCTGAACAAAACAATACAAACTATTCAGAACTGAACCAGAAATCCTTCCCAATTGGAAAAAGTGCCATTACAGAATGGATATTTTTACCTTTGATAATGGCCATAAGCAATGGAGGCATTTTAAGCGTCTACCTTTTGTAGTCATCCATCATGGTCAGTACTTGAATGGAATCATCTACTGGATCGGAAAGAAATTAGAAAAAGAGGGGGAGGTTGTGATATATGCTCTCCATGTCGACACTGAACAGATGGAATGCATTGCAACCTTAAAAATTGGAGCTTTCTTGAAGAATGGTTCCATTAAGATATACGAGGACAGGGTTTACGCAGTTATTAACTTGTTGGACAAACGAGTATCTCCACCATGTTATAAGATTGAATTGTGGAGGATGCAAAAGAAAGATTCATGGATTAAAGAATTTAGTGCTGATGAAGAATTTTTTGGCTTTGTTGAAGTTTTTGAAGATGGAGAGTTGTTGTTTGCGATCAAAGATGACTTACTTCGTTTGGATAAGAGTAGAAAGAAGATCAAGATCAAAACATTGAATCCAAGTGAGAGTACAACTAAAGCTACAGGGCGTTATACTATAAAATCTATTAATTTCGAGTCTCTTTCAACCATTTTGGTTTGA ATGGATATTTTTACCTTTGATAATGGCCATAAGCAATGGAGGCATTTTAAGCGTCTACCTTTTGTAGTCATCCATCATGGTCAGTACTTGAATGGAATCATCTACTGGATCGGAAAGAAATTAGAAAAAGAGGGGGAGGTTGTGATATATGCTCTCCATGTCGACACTGAACAGATGGAATGCATTGCAACCTTAAAAATTGGAGCTTTCTTGAAGAATGGTTCCATTAAGATATACGAGGACAGGGTTTACGCAGTTATTAACTTGTTGGACAAACGAGTATCTCCACCATGTTATAAGATTGAATTGTGGAGGATGCAAAAGAAAGATTCATGGATTAAAGAATTTAGTGCTGATGAAGAATTTTTTGGCTTTGTTGAAGTTTTTGAAGATGGAGAGTTGTTGTTTGCGATCAAAGATGACTTACTTCGTTTGGATAAGAGTAGAAAGAAGATCAAGATCAAAACATTGAATCCAAGTGAGAGTACAACTAAAGCTACAGGGCGTTATACTATAAAATCTATTAATTTCGAGTCTCTTTCAACCATTTTGGTTTGA ATGGATATTTTTACCTTTGATAATGGCCATAAGCAATGGAGGCATTTTAAGCGTCTACCTTTTGTAGTCATCCATCATGGTCAGTACTTGAATGGAATCATCTACTGGATCGGAAAGAAATTAGAAAAAGAGGGGGAGGTTGTGATATATGCTCTCCATGTCGACACTGAACAGATGGAATGCATTGCAACCTTAAAAATTGGAGCTTTCTTGAAGAATGGTTCCATTAAGATATACGAGGACAGGGTTTACGCAGTTATTAACTTGTTGGACAAACGAGTATCTCCACCATGTTATAAGATTGAATTGTGGAGGATGCAAAAGAAAGATTCATGGATTAAAGAATTTAGTGCTGATGAAGAATTTTTTGGCTTTGTTGAAGTTTTTGAAGATGGAGAGTTGTTGTTTGCGATCAAAGATGACTTACTTCGTTTGGATAAGAGTAGAAAGAAGATCAAGATCAAAACATTGAATCCAAGTGAGAGTACAACTAAAGCTACAGGGCGTTATACTATAAAATCTATTAATTTCGAGTCTCTTTCAACCATTTTGGTTTGA
BLAST of CSPI05G29960 vs. TrEMBL
Match: A0A0A0KUJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26 Identity = 77/183 (42.08%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of CSPI05G29960 vs. TrEMBL
Match: A0A0A0KSN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643960 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.5e-19 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 1
BLAST of CSPI05G29960 vs. TrEMBL
Match: A0A0A0KSJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.7e-18 Identity = 74/201 (36.82%), Postives = 100/201 (49.75%), Query Frame = 1
BLAST of CSPI05G29960 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.5e-18 Identity = 73/204 (35.78%), Postives = 110/204 (53.92%), Query Frame = 1
BLAST of CSPI05G29960 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.1e-16 Identity = 71/200 (35.50%), Postives = 104/200 (52.00%), Query Frame = 1
BLAST of CSPI05G29960 vs. NCBI nr
Match: gi|659119533|ref|XP_008459707.1| (PREDICTED: putative F-box protein At1g55070 [Cucumis melo]) HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77 Identity = 146/184 (79.35%), Postives = 159/184 (86.41%), Query Frame = 1
BLAST of CSPI05G29960 vs. NCBI nr
Match: gi|449447691|ref|XP_004141601.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 3.2e-26 Identity = 77/183 (42.08%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of CSPI05G29960 vs. NCBI nr
Match: gi|659119531|ref|XP_008459706.1| (PREDICTED: uncharacterized protein LOC103498748 [Cucumis melo]) HSP 1 Score: 124.4 bits (311), Expect = 2.1e-25 Identity = 73/183 (39.89%), Postives = 108/183 (59.02%), Query Frame = 1
BLAST of CSPI05G29960 vs. NCBI nr
Match: gi|659117583|ref|XP_008458678.1| (PREDICTED: uncharacterized protein LOC103498006 [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20 Identity = 70/195 (35.90%), Postives = 105/195 (53.85%), Query Frame = 1
BLAST of CSPI05G29960 vs. NCBI nr
Match: gi|659120418|ref|XP_008460183.1| (PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]) HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19 Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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