CSPI05G28600 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G28600
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Membrane lipoprotein, putative
Location	Chr5 : 26971552 .. 26972508 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAGTGAAAAATTGCAGGCTTTAACATCTCTGTCTTCTTGTCTTCCCCAGCAACTGCACCTTTGTCCCCTTAGATATCATTAAAGCCTGCTTCCATTGTTAGCCCCACTCTCATCTCACAACCCACCAAAAAACAATACTCAATTCCTCTATATAAACCCACCGAAATTTTGAGAGTTTAACTTGAAGCAAACCCATTTAAAAAAATTCGTGTGAGTAATTTCATCAAACATGTGGAGGACAGAAGAAATTAACAGAGAATTAAAGCAAGGAGGAGAGTTTGAAGATAAAGATTCTATAAGGAATGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAACTTGCTTGAAGAAATTAGCTGTTGTTATGTTCTTGGTTGAGCAATGGCGGATCTGGGTTTTCCTTGTTTTAAACCTTATTCTTGTTGCAATTTTCTTCACTTCAAATCCTGCAAATCCTGCAAATTACAGTGAAACCCAAAAACAAGAGACAAGTGGTAAAACAAAGCTGAAGAAGATTGAAAAGAGAGAGTTGGAGGAGGCTAAGAAAGAAGAAGATAAAACAAAGCAGAAGAAGATTGAAAACAGAGAGATCAAAGAGGCTATAAAAGAAGAAGATGAAATCAATGAAGAAGATGAAATTGAAGAAGAAGAAGAAGAAGAAATAGAGTTATCAAAAGAGGAATTGAATGAAAGAGTTGAAGCTTTCATTGTAATGTTCAAGAAGCAACTGATTTCAGATGCAAGAAAAGGAGGAAACAGATTCAGCTATAATCATAATTATGATAAGAATAAGAGGAAGAATAGTCAATAGCCAAAGCCAAAAATCTGTTTGGCCCAACAGATATGAGGATGTTGTTCCCACTGTTTCTCTTTTGTTTCTTCAATCAGTTTCAAGAGCTTCAAAATATGTAATCTCCAAACCATAAATTTTCAAATATACCATCATTTTTGT

mRNA sequence

ATGTGGAGGACAGAAGAAATTAACAGAGAATTAAAGCAAGGAGGAGAGTTTGAAGATAAAGATTCTATAAGGAATGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAACTTGCTTGAAGAAATTAGCTGTTGTTATGTTCTTGGTTGAGCAATGGCGGATCTGGGTTTTCCTTGTTTTAAACCTTATTCTTGTTGCAATTTTCTTCACTTCAAATCCTGCAAATCCTGCAAATTACAGTGAAACCCAAAAACAAGAGACAAGTGGTAAAACAAAGCTGAAGAAGATTGAAAAGAGAGAGTTGGAGGAGGCTAAGAAAGAAGAAGATAAAACAAAGCAGAAGAAGATTGAAAACAGAGAGATCAAAGAGGCTATAAAAGAAGAAGATGAAATCAATGAAGAAGATGAAATTGAAGAAGAAGAAGAAGAAGAAATAGAGTTATCAAAAGAGGAATTGAATGAAAGAGTTGAAGCTTTCATTGTAATGTTCAAGAAGCAACTGATTTCAGATGCAAGAAAAGGAGGAAACAGATTCAGCTATAATCATAATTATGATAAGAATAAGAGGAAGAATAGTCAATAG

Coding sequence (CDS)

ATGTGGAGGACAGAAGAAATTAACAGAGAATTAAAGCAAGGAGGAGAGTTTGAAGATAAAGATTCTATAAGGAATGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAACTTGCTTGAAGAAATTAGCTGTTGTTATGTTCTTGGTTGAGCAATGGCGGATCTGGGTTTTCCTTGTTTTAAACCTTATTCTTGTTGCAATTTTCTTCACTTCAAATCCTGCAAATCCTGCAAATTACAGTGAAACCCAAAAACAAGAGACAAGTGGTAAAACAAAGCTGAAGAAGATTGAAAAGAGAGAGTTGGAGGAGGCTAAGAAAGAAGAAGATAAAACAAAGCAGAAGAAGATTGAAAACAGAGAGATCAAAGAGGCTATAAAAGAAGAAGATGAAATCAATGAAGAAGATGAAATTGAAGAAGAAGAAGAAGAAGAAATAGAGTTATCAAAAGAGGAATTGAATGAAAGAGTTGAAGCTTTCATTGTAATGTTCAAGAAGCAACTGATTTCAGATGCAAGAAAAGGAGGAAACAGATTCAGCTATAATCATAATTATGATAAGAATAAGAGGAAGAATAGTCAATAG

Homology

[Close]

BLAST of CSPI05G28600 vs. TrEMBL
Match: A0A0A0KVE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633200 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.1e-90
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 1


Query: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60
           MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60

Query: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120
           LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR
Sbjct: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120

Query: 121 EIKEAIKEEDEINEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS 180
           EIKEAIKEEDEI EEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS
Sbjct: 121 EIKEAIKEEDEIKEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS 180

Query: 181 YNHNYDKNKRKNSQ 195
           YNHNYDKNKRKNSQ
Sbjct: 181 YNHNYDKNKRKNSQ 194

[Close]

BLAST of CSPI05G28600 vs. TrEMBL
Match: A0A0D2Q264_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G026600 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-19
Identity = 76/163 (46.63%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 18  EDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLILVAIFFTSNPANP 77
           E K+++  AL +AG A+L+  CLK+ A+++FLV+QWR WVFLVLNL+L+AIFFTS   N 
Sbjct: 3   EKKENVNTALFTAGIAVLLV-CLKR-ALLLFLVQQWRAWVFLVLNLVLLAIFFTSMTPNS 62

Query: 78  ANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKI-ENREIKEAIKEEDEINEED 137
           +  S+ +  +   + K K+    E E   ++   +  K+I ++ E+++ +++E  + EE+
Sbjct: 63  SQISQQEMNKNEEEMKKKRGNFNEAEACTEDHQVSNSKQISKSEEVEDLVEKEVVVEEEE 122

Query: 138 EIEEEEEEE----IELSKEELNERVEAFIVMFKKQLISDARKG 176
           E EEEEEEE    ++LSKEELNERVEAFI MF++QL  DARKG
Sbjct: 123 EEEEEEEEENIEALKLSKEELNERVEAFIAMFRQQLALDARKG 163

[Close]

BLAST of CSPI05G28600 vs. TrEMBL
Match: C6SZR7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-13
Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 6   EINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLIL 65
           E+ RE+    E   +DS+   + +AGT LLM  CLK      FLVEQWR WVFL+LN+IL
Sbjct: 2   EVKREIITKEEEHKEDSMHTIVFTAGTFLLMV-CLKH-----FLVEQWRAWVFLILNVIL 61

Query: 66  VAIFFTS-NPANPANYS---ETQKQETSG-KTKLKKIEKRELEEAKKEEDKTKQKKIENR 125
           +AI F S  PA   ++S   E   +E  G   KL+K   RE EE K   D   ++   + 
Sbjct: 62  LAILFMSMRPAKLEDHSSGSEISVEEVKGDNNKLEKKRSRETEEGK---DCYTKQCCSST 121

Query: 126 EIKEAIKEEDEINEEDEIEEEEEEEIE-LSKEELNERVEAFIVMFKKQLISDARKGGN 178
                +  E+E  E++E EEEEEE++  LSKEELNERVEAFI MF++ LISD ++  N
Sbjct: 122 SSSTYVHVENEKEEDEEEEEEEEEQVPVLSKEELNERVEAFIAMFRQHLISDVKQAEN 170

[Close]

BLAST of CSPI05G28600 vs. TrEMBL
Match: A0A0B2RQV0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_033370 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-13
Identity = 78/178 (43.82%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 6   EINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLIL 65
           E+ RE+    E   +DS+   + +AGT LLM  CLK      FLVEQWR WVFL+LN+IL
Sbjct: 2   EMKREIITKEEEHKEDSMHTIVFTAGTFLLMV-CLKH-----FLVEQWRAWVFLILNVIL 61

Query: 66  VAIFFTS-NPANPANYSE----TQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 125
           +AI F S  PA   ++S     + ++  S   KL+K   RE EE K   D   ++   + 
Sbjct: 62  LAILFMSMRPAKLEDHSSGSEISVEEVKSDNNKLEKKRSRETEEGK---DCYTKQCCSST 121

Query: 126 EIKEAIKEEDEINEEDEIEEEEEEEIE-LSKEELNERVEAFIVMFKKQLISDARKGGN 178
                +  E+E  E++E EEEEEE++  LSKEELNERVEAFI MF++ LISD ++  N
Sbjct: 122 SSSTYVHVENEKEEDEEEEEEEEEQVPVLSKEELNERVEAFIAMFRQHLISDVKQAEN 170

[Close]

BLAST of CSPI05G28600 vs. TrEMBL
Match: I1N602_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G017000 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-13
Identity = 78/178 (43.82%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 6   EINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLIL 65
           E+ RE+    E   +DS+   + +AGT LLM  CLK      FLVEQWR WVFL+LN+IL
Sbjct: 2   EMKREIITKEEEHKEDSMHTIVFTAGTFLLMV-CLKH-----FLVEQWRAWVFLILNVIL 61

Query: 66  VAIFFTS-NPANPANYSE----TQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 125
           +AI F S  PA   ++S     + ++  S   KL+K   RE EE K   D   ++   + 
Sbjct: 62  LAILFMSMRPAKLEDHSSGSEISVEEVKSDNNKLEKKRSRETEEGK---DCYTKQCCSST 121

Query: 126 EIKEAIKEEDEINEEDEIEEEEEEEIE-LSKEELNERVEAFIVMFKKQLISDARKGGN 178
                +  E+E  E++E EEEEEE++  LSKEELNERVEAFI MF++ LISD ++  N
Sbjct: 122 SSSTYVHVENEKEEDEEEEEEEEEQVPVLSKEELNERVEAFIAMFRQHLISDVKQAEN 170

[Close]

BLAST of CSPI05G28600 vs. TAIR10
Match: AT3G28420.1 (AT3G28420.1 Putative membrane lipoprotein)

HSP 1 Score: 54.3 bits (129), Expect = 9.8e-08
Identity = 64/188 (34.04%), Postives = 99/188 (52.66%), Query Frame = 1


Query: 19  DKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLILVAIFFTSNPANPA 78
           +++++  +LL+A   L MA CLK  + V +L+EQWR  VFL+LN++L+A++FTS   N  
Sbjct: 10  EEENMCTSLLTAVVVLSMA-CLKHFSSVSYLIEQWRSLVFLILNVVLLAVYFTSTRPN-L 69

Query: 79  NYSETQKQETSGKTKLKKIEKRELEEAKK----------------------------EED 138
             S   K    G+ ++ + +K ++++ K                             EE 
Sbjct: 70  GRSHDFKTRRGGRLRMMREKKNKIKKKKTRVVVEPACFDQGFLLVEPKEVIKKCVLVEET 129

Query: 139 KTKQKKIENREIKEAIKEEDEINEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLIS 179
           K    K E   +K+ +  + EI  E   EE+E E   LS EELNERVEAFI  F++ L+ 
Sbjct: 130 KRVCPKFE-ETVKDCLFHKKEI--EYNGEEDEFEPGRLSNEELNERVEAFITTFRQHLVL 189

[Close]

BLAST of CSPI05G28600 vs. NCBI nr
Match: gi|778707154|ref|XP_011655979.1| (PREDICTED: uncharacterized protein LOC105435604 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 7.4e-90
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 1


Query: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60
           MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60

Query: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120
           LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR
Sbjct: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120

Query: 121 EIKEAIKEEDEINEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS 180
           EIKEAIKEEDEI EEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS
Sbjct: 121 EIKEAIKEEDEIKEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS 180

Query: 181 YNHNYDKNKRKNSQ 195
           YNHNYDKNKRKNSQ
Sbjct: 181 YNHNYDKNKRKNSQ 194

[Close]

BLAST of CSPI05G28600 vs. NCBI nr
Match: gi|659117638|ref|XP_008458709.1| (PREDICTED: ABC transporter F family member 4 [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 2.5e-69
Identity = 169/194 (87.11%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60
           MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKK AVVMFLVEQWRIWVFL 
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKK-AVVMFLVEQWRIWVFLA 60

Query: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120
           LNLILVAIFFTSNPA   NYSETQKQETSGKTK KK E  EL+EAKKEEDKTKQKK ENR
Sbjct: 61  LNLILVAIFFTSNPA---NYSETQKQETSGKTKQKKTENIELKEAKKEEDKTKQKKTENR 120

Query: 121 EIKEAIKEEDEINEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNRFS 180
           E KEA KEEDEI EE+  EEEEEEEI LSKEELNERVEAFIVMFKKQLISDARKGGNR S
Sbjct: 121 EFKEARKEEDEIEEEE--EEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGGNRLS 180

Query: 181 YNHNYDKNKRKNSQ 195
           YN++   NK+KNSQ
Sbjct: 181 YNNS--NNKKKNSQ 186

[Close]

BLAST of CSPI05G28600 vs. NCBI nr
Match: gi|823167683|ref|XP_012483741.1| (PREDICTED: ABC transporter F family member 4 [Gossypium raimondii])

HSP 1 Score: 102.4 bits (254), Expect = 8.9e-19
Identity = 76/163 (46.63%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 18  EDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLILVAIFFTSNPANP 77
           E K+++  AL +AG A+L+  CLK+ A+++FLV+QWR WVFLVLNL+L+AIFFTS   N 
Sbjct: 3   EKKENVNTALFTAGIAVLLV-CLKR-ALLLFLVQQWRAWVFLVLNLVLLAIFFTSMTPNS 62

Query: 78  ANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKI-ENREIKEAIKEEDEINEED 137
           +  S+ +  +   + K K+    E E   ++   +  K+I ++ E+++ +++E  + EE+
Sbjct: 63  SQISQQEMNKNEEEMKKKRGNFNEAEACTEDHQVSNSKQISKSEEVEDLVEKEVVVEEEE 122

Query: 138 EIEEEEEEE----IELSKEELNERVEAFIVMFKKQLISDARKG 176
           E EEEEEEE    ++LSKEELNERVEAFI MF++QL  DARKG
Sbjct: 123 EEEEEEEEENIEALKLSKEELNERVEAFIAMFRQQLALDARKG 163

[Close]

BLAST of CSPI05G28600 vs. NCBI nr
Match: gi|351725735|ref|NP_001236335.1| (uncharacterized protein LOC100306529 [Glycine max])

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13
Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 6   EINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLIL 65
           E+ RE+    E   +DS+   + +AGT LLM  CLK      FLVEQWR WVFL+LN+IL
Sbjct: 2   EVKREIITKEEEHKEDSMHTIVFTAGTFLLMV-CLKH-----FLVEQWRAWVFLILNVIL 61

Query: 66  VAIFFTS-NPANPANYS---ETQKQETSG-KTKLKKIEKRELEEAKKEEDKTKQKKIENR 125
           +AI F S  PA   ++S   E   +E  G   KL+K   RE EE K   D   ++   + 
Sbjct: 62  LAILFMSMRPAKLEDHSSGSEISVEEVKGDNNKLEKKRSRETEEGK---DCYTKQCCSST 121

Query: 126 EIKEAIKEEDEINEEDEIEEEEEEEIE-LSKEELNERVEAFIVMFKKQLISDARKGGN 178
                +  E+E  E++E EEEEEE++  LSKEELNERVEAFI MF++ LISD ++  N
Sbjct: 122 SSSTYVHVENEKEEDEEEEEEEEEQVPVLSKEELNERVEAFIAMFRQHLISDVKQAEN 170

[Close]

BLAST of CSPI05G28600 vs. NCBI nr
Match: gi|734407054|gb|KHN34177.1| (hypothetical protein glysoja_033370 [Glycine soja])

HSP 1 Score: 83.6 bits (205), Expect = 4.3e-13
Identity = 78/178 (43.82%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 6   EINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLVLNLIL 65
           E+ RE+    E   +DS+   + +AGT LLM  CLK      FLVEQWR WVFL+LN+IL
Sbjct: 2   EMKREIITKEEEHKEDSMHTIVFTAGTFLLMV-CLKH-----FLVEQWRAWVFLILNVIL 61

Query: 66  VAIFFTS-NPANPANYSE----TQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 125
           +AI F S  PA   ++S     + ++  S   KL+K   RE EE K   D   ++   + 
Sbjct: 62  LAILFMSMRPAKLEDHSSGSEISVEEVKSDNNKLEKKRSRETEEGK---DCYTKQCCSST 121

Query: 126 EIKEAIKEEDEINEEDEIEEEEEEEIE-LSKEELNERVEAFIVMFKKQLISDARKGGN 178
                +  E+E  E++E EEEEEE++  LSKEELNERVEAFI MF++ LISD ++  N
Sbjct: 122 SSSTYVHVENEKEEDEEEEEEEEEQVPVLSKEELNERVEAFIAMFRQHLISDVKQAEN 170

The following BLAST results are available for this feature:

BLAST of CSPI05G28600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G28600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVE3_CUCSA	5.1e-90	99.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633200 PE=4 SV=1	[more]
A0A0D2Q264_GOSRA	6.2e-19	46.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G026600 PE=4 SV=1	[more]
C6SZR7_SOYBN	1.0e-13	44.94	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A0B2RQV0_GLYSO	3.0e-13	43.82	Uncharacterized protein OS=Glycine soja GN=glysoja_033370 PE=4 SV=1	[more]
I1N602_SOYBN	3.0e-13	43.82	Uncharacterized protein OS=Glycine max GN=GLYMA_19G017000 PE=4 SV=1	[more]

BLAST of CSPI05G28600 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G28420.1	9.8e-08	34.04	Putative membrane lipoprotein	[more]

BLAST of CSPI05G28600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778707154\|ref\|XP_011655979.1\|	7.4e-90	99.48	PREDICTED: uncharacterized protein LOC105435604 [Cucumis sativus]	[more]
gi\|659117638\|ref\|XP_008458709.1\|	2.5e-69	87.11	PREDICTED: ABC transporter F family member 4 [Cucumis melo]	[more]
gi\|823167683\|ref\|XP_012483741.1\|	8.9e-19	46.63	PREDICTED: ABC transporter F family member 4 [Gossypium raimondii]	[more]
gi\|351725735\|ref\|NP_001236335.1\|	1.5e-13	44.94	uncharacterized protein LOC100306529 [Glycine max]	[more]
gi\|734407054\|gb\|KHN34177.1\|	4.3e-13	43.82	hypothetical protein glysoja_033370 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G28600.1	CSPI05G28600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 95..159 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G28600	Cla010361	Watermelon (97103) v1	cpiwmB370
CSPI05G28600	Csa5G633200	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G28600	MELO3C021487	Melon (DHL92) v3.5.1	cpimeB349
CSPI05G28600	ClCG09G018550	Watermelon (Charleston Gray)	cpiwcgB356
CSPI05G28600	MELO3C021487.2	Melon (DHL92) v3.6.1	cpimedB339
CSPI05G28600	CsaV3_5G037680	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G28600	Bhi06G000384	Wax gourd	cpiwgoB473
CSPI05G28600	Cucsa.158670	Cucumber (Gy14) v1	cgycpiB236
CSPI05G28600	CmaCh04G027390	Cucurbita maxima (Rimu)	cmacpiB730
CSPI05G28600	CmaCh15G002990	Cucurbita maxima (Rimu)	cmacpiB304
CSPI05G28600	Cp4.1LG01g23030	Cucurbita pepo (Zucchini)	cpecpiB414
CSPI05G28600	Cp4.1LG13g08650	Cucurbita pepo (Zucchini)	cpecpiB177
CSPI05G28600	Carg02272	Silver-seed gourd	carcpiB0297
CSPI05G28600	Carg04410	Silver-seed gourd	carcpiB0722

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G28600	Bottle gourd (USVL1VR-Ls)	cpilsiB352
CSPI05G28600	Melon (DHL92) v3.6.1	cpimedB377
CSPI05G28600	Cucumber (Gy14) v2	cgybcpiB035
CSPI05G28600	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G28600	Cucumber (Chinese Long) v3	cpicucB259
CSPI05G28600	Watermelon (97103) v2	cpiwmbB357
CSPI05G28600	Watermelon (97103) v2	cpiwmbB429
CSPI05G28600	Wax gourd	cpiwgoB505
CSPI05G28600	Wild cucumber (PI 183967)	cpicpiB036
CSPI05G28600	Cucumber (Gy14) v1	cgycpiB110
CSPI05G28600	Cucurbita moschata (Rifu)	cmocpiB216
CSPI05G28600	Cucurbita moschata (Rifu)	cmocpiB296
CSPI05G28600	Cucurbita moschata (Rifu)	cmocpiB722
CSPI05G28600	Cucumber (Chinese Long) v2	cpicuB219
CSPI05G28600	Melon (DHL92) v3.5.1	cpimeB382
CSPI05G28600	Watermelon (Charleston Gray)	cpiwcgB384
CSPI05G28600	Watermelon (Charleston Gray)	cpiwcgB360
CSPI05G28600	Watermelon (97103) v1	cpiwmB432
CSPI05G28600	Bottle gourd (USVL1VR-Ls)	cpilsiB355