CSPI05G27510 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G27510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionF-box protein SKIP5
LocationChr5 : 25982810 .. 25986056 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAGTAAACGACAGGAACTGGAAGCTATGATTTGGTCATCTGTATAGTGAGTCGGGAGCTTCGTTGTGGGGCTATGGCCAAGGCCGATATGAGCCGAGTGGTAAAGGACCAGAGCCGGGTTGCCATAGTTTCGATGGAAGAAAACAAGCAAAGAAAGTGGAAAAGAAAAGGCACTTCATCCTCCTCGCCTTCTGTTAACAGCTTGGATGATGGTTGTCTAATGCATATTTTCAGCTTTCTTTCCCCCATACCAGGTACCTCTCTTTCAATTTCTTGTCTGAACGTCTATTCTTTCAGTTTCTAGAATCTCAAATTTAAGGGTTCTGTTGTTTATTTTGCAAATTTTGGTGGTTTGCTCTGCTGCTAAGCAGAAATAAAAATCGAAACGCTTGTCAAAAACCATGAAGGAGTGATTTTGCAATCTTTGGGGTATTTCTGGAAATGGATTGGGGAAAGGATTTCAATTGTAATTTTGGGTTTGGCGTGAATTGGGGATTGTTGTTTCAATGTATAAAGTAACTTACGTACTTGTTTCAGCATATCTATATCAAAAAGAAAAAAAAAAAAAAAAAAAAAACTTCGAAGAAATGAAATGCTTAGCTTCTTTGGGTTGGTTCTGTCGGAGTCTATCACTGAGCCTTATTGGTTTTCATTATGTGTGGTTTAATGGAATTGATTATGAAGTGAGAAGTTCTTTCCTTGGGCTTTGGATATGAATCGATTGGATATAATACATACATTGGTATGTGATACTGAGGAGTCGTTTAAAGAACTAAAAACACACGTGATGCATTTCTTTTGCTTCTTCTCTATTCTAGTGACCAAGTTTTTACTTTTAGCCTACTGAAGTTGTAATTGAGAGGATGCCGCCTGTTTATTTCCGTGGAGTTTCTGCCTTTCCTGTCACTTTTGCCATTGAGTTTGCAGATCGGTATAACACCGCCCTCGTTTGCCACAGATGGCGTTACTTGGCCTGTCATCCTAGGCTGTGGCTGCGAGTAGAACGATCTATTAAAGATTTATCTGAGCCGGGAGTTTTCCCAACAATCGAGGCGGCTGTTGCTGCTGCTAGGTAAATTCTTGCATGTTTATGATTTGTTTCTTAAGAGTGGGAATGAATAGAGTAAGTTGTTTATAGAGCCTAAATGATTCTGTTCTCTATAGGCCTGGTGACACCATACTTATTGCAACAGGTGGAGTTCATTCTGCCTCTAACATTCAAATAACAAAACCACTTTGCCTGGTATATTCCATTTCCCCCTTCTTTTAGTTGCCTGGCTGTGAAATTTTACTCTTAGGTCTTAATGTATGGTTTAAATGTTATCCAATTGGCCTGTCTCTGCAGCACTCATGTCTAGTTTGTGATTAATTCAAGTACCCTTCCAGAGGAAAAGTGTCATGTTATATATGTGGAAGGACCTGTCAATGAATAACTAGGAAAAGCGTTTCTTTTCGGAAAAAAAAATGTGGCTAGTTTCTCTAGAAAGGTCGCTGCATAAAGCTAGAATTTGGGTTTATGTTATTCATCTTTAACGAAACTAAGAAATGATTGGATCGAACAAGATAGCTACAAAATATAATTGGAGTCTTAAAAGAAGGTTGATCTGGGGTAACTAGTTAGCTATTTGGGTTCTGCTATGCGTTTTAAAGTGAATTTCTCTGTGGCTTAGCCCTGCATTTTCAATTCAAATTGAGTACTTGTATGAAGTGGCAATATTATTAAGCTATTTCCCTGTACTTGCTTTTAAATATTGGTGAAACATTCATGGTCCCTTGTGCTCAGCGTTTGGACTTTATGAGCTTTTAACTTTAAGATTTTAGCACCTTTGTATGCTTCAACTTATTCCATAACGTTGTAGGTTTTGATCTTTCTGGGGGCTTAATTTATGATAGAAGTGGTGAAAGACTCATTTCATAAGGAATTTAAGTTTCACTATTTTTCCATTTTATCTTAAACTTACCATTTCAGATTGGTGGAGGTGAGCTTCCTGAGGAGACAACACTTTTCTGTACTCGTGGTTCGGAGAGGTACATAACCTATAGCATATAATGTAATTTGCGATGGTGTCCTATAGGGTTTTTTTTCTCCCTCTTAACATTTCCAAGAGATCATTTATCATCACCCATCTCGTTATTGGTGCCCTCTAATTGAATTTGTTATTTACTTATAGTGACTTCACTTGATTCATACATTCTTTCATCATGGATGTATTGCATTCTCATTCAGCAGCCAGGTCTGGAGAAGGTCTTGCATAAACTTCTTTTTTTATTTGGTTCAAATCCCATTTTGATCAAGAGAACTTTCATATATTTGTTTCATTTTGGTCACAAGGTTCAAAGGAGCCTTCCTACGTTTAGGAATTAACTGTTTTTGGTGATATAACTTTTAAAAATTGTCATTTTGGTCTTTACTAGTGTATTGTCGCTAATATTCACTCACCCAATGGTCATCTCAGGCAACCTATGGGTTTCGATGTATTTCTATGTTAGCATGTACAACATGCTCAAATCGTGTGTGTGTAAGTTAAAAGCAAAGTGGTTATTTTCTTTAAGTACATAAGCTAAAATAAATCGATATTTTGAAAGTTTAAGGGCAGACATTCTAGAGTTCTTGAAAGTTAAGAGGGCCCAAAGGAAGATTTATGATTTTTTAAAGGAAACTTATTATTGACTTCCTATTTCTTCTTAACATGCAGTGCTTTGGAGTTCCTGTCTACCAGTAAACTTTCCAACTTAACAGTCAAGGCAGAACTTGGTTGCTGCTTGCTTCACAGGAAGGGAAGATTGATTGTAGATGGATGTGTCCTCCAATGTGAGTCAAACCCTTTGGATTACCTATCATGCCCCATTGTTTGTACAGCAAGTCCAGATAAGTTATTGCCTTCCTCAGTGAAGGGTGGTTATACACACGGCGTTTCTGTCTCTCACACTCGTATTGAGGGTGGAGCCAAAGCTGTCCTAACGAGTGAGGACCTGACATTGCAGCATGTTCGAGTTATTTACGCTCGAACAGCTCTTTTCTTTTGGTTTGATGTTGAATACAAGTTATAATAATGCTGTTGTAATGTATTAGCAATGTGCATTTGTTACAAATTGTTAATCTTTTAGGTATGTTGTTATATTGGACTTGTATTGCGTCTCTGTTTATGCTTTTATCATAATCCCTTTCAATGTATTATGTCTTCGTTTTTCTTTCCCTGAACTATATTCTTTAGTTAATCTATAAATCTATTCATTAAACTTTC

mRNA sequence

ATGGCCAAGGCCGATATGAGCCGAGTGGTAAAGGACCAGAGCCGGGTTGCCATAGTTTCGATGGAAGAAAACAAGCAAAGAAAGTGGAAAAGAAAAGGCACTTCATCCTCCTCGCCTTCTGTTAACAGCTTGGATGATGGTTGTCTAATGCATATTTTCAGCTTTCTTTCCCCCATACCAGATCGGTATAACACCGCCCTCGTTTGCCACAGATGGCGTTACTTGGCCTGTCATCCTAGGCTGTGGCTGCGAGTAGAACGATCTATTAAAGATTTATCTGAGCCGGGAGTTTTCCCAACAATCGAGGCGGCTGTTGCTGCTGCTAGGCCTGGTGACACCATACTTATTGCAACAGGTGGAGTTCATTCTGCCTCTAACATTCAAATAACAAAACCACTTTGCCTGATTGGTGGAGGTGAGCTTCCTGAGGAGACAACACTTTTCTGTACTCGTGGTTCGGAGAGTGCTTTGGAGTTCCTGTCTACCAGTAAACTTTCCAACTTAACAGTCAAGGCAGAACTTGGTTGCTGCTTGCTTCACAGGAAGGGAAGATTGATTGTAGATGGATGTGTCCTCCAATGTGAGTCAAACCCTTTGGATTACCTATCATGCCCCATTGTTTGTACAGCAAGTCCAGATAAGTTATTGCCTTCCTCAGTGAAGGGTGGTTATACACACGGCGTTTCTGTCTCTCACACTCGTATTGAGGGTGGAGCCAAAGCTGTCCTAACGAGTGAGGACCTGACATTGCAGCATGTTCGAGTTATTTACGCTCGAACAGCTCTTTTCTTTTGGTTTGATGTTGAATACAAGTTATAA

Coding sequence (CDS)

ATGGCCAAGGCCGATATGAGCCGAGTGGTAAAGGACCAGAGCCGGGTTGCCATAGTTTCGATGGAAGAAAACAAGCAAAGAAAGTGGAAAAGAAAAGGCACTTCATCCTCCTCGCCTTCTGTTAACAGCTTGGATGATGGTTGTCTAATGCATATTTTCAGCTTTCTTTCCCCCATACCAGATCGGTATAACACCGCCCTCGTTTGCCACAGATGGCGTTACTTGGCCTGTCATCCTAGGCTGTGGCTGCGAGTAGAACGATCTATTAAAGATTTATCTGAGCCGGGAGTTTTCCCAACAATCGAGGCGGCTGTTGCTGCTGCTAGGCCTGGTGACACCATACTTATTGCAACAGGTGGAGTTCATTCTGCCTCTAACATTCAAATAACAAAACCACTTTGCCTGATTGGTGGAGGTGAGCTTCCTGAGGAGACAACACTTTTCTGTACTCGTGGTTCGGAGAGTGCTTTGGAGTTCCTGTCTACCAGTAAACTTTCCAACTTAACAGTCAAGGCAGAACTTGGTTGCTGCTTGCTTCACAGGAAGGGAAGATTGATTGTAGATGGATGTGTCCTCCAATGTGAGTCAAACCCTTTGGATTACCTATCATGCCCCATTGTTTGTACAGCAAGTCCAGATAAGTTATTGCCTTCCTCAGTGAAGGGTGGTTATACACACGGCGTTTCTGTCTCTCACACTCGTATTGAGGGTGGAGCCAAAGCTGTCCTAACGAGTGAGGACCTGACATTGCAGCATGTTCGAGTTATTTACGCTCGAACAGCTCTTTTCTTTTGGTTTGATGTTGAATACAAGTTATAA
Homology
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BLAST of CSPI05G27510 vs. Swiss-Prot
Match: SKIP5_ARATH (F-box protein SKIP5 OS=Arabidopsis thaliana GN=SKIP5 PE=1 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.1e-94
Identity = 171/255 (67.06%), Postives = 202/255 (79.22%), Query Frame = 1 

Query: 26  QRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 85
           + K K++    S  S+N+LDDGCLMHI SFLSPIPDRYNTALVCHRWRYLACHPRLWLRV
Sbjct: 20  ESKMKKRMKPYSLTSLNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 79

Query: 86  ERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQITKPLCLIGGGELPEET 145
           +R +KDLS+PGVF  IE+AV+AARPGDTILI  GG +  SNIQI KPLCL+GGGE+P+ET
Sbjct: 80  DRFVKDLSQPGVFLNIESAVSAARPGDTILIVAGGNYRVSNIQIKKPLCLVGGGEIPDET 139

Query: 146 TLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDGCVLQCESNPLDYLSCP 205
           TL C RGS+SALE LST KL+NLTVKAELGCCLLHR GRL +DGCVLQCE+NPLD+LSCP
Sbjct: 140 TLVCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCP 199

Query: 206 IVCTASPDKL--------LPSSVKGGY-THGVSVSHTRIEGGAKAVLTSEDLTLQHVRVI 265
           IV TA  + +        +  +V G    + V+V  TRIEGGAKAV T  DL LQ VRV+
Sbjct: 200 IVSTAGDEDIENILSHVEVKETVTGKIKANSVTVLQTRIEGGAKAVSTRGDLVLQRVRVM 259

Query: 266 YARTALFFWFDVEYK 272
           Y++  L+FWFDV+Y+
Sbjct: 260 YSKAYLYFWFDVDYE 274

[Close]
BLAST of CSPI05G27510 vs. TrEMBL
Match: A0A0A0KRR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623720 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 7.8e-153
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1 

Query: 1   MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP 60
           MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP
Sbjct: 1   MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP 60

Query: 61  DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG 120
           DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG
Sbjct: 61  DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG 120

Query: 121 VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH 180
           VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH
Sbjct: 121 VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH 180

Query: 181 RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK 240
           RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK
Sbjct: 181 RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK 240

Query: 241 AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 273
           AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL
Sbjct: 241 AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 272

[Close]
BLAST of CSPI05G27510 vs. TrEMBL
Match: M5XEU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010167mg PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.7e-105
Identity = 199/260 (76.54%), Postives = 218/260 (83.85%), Query Frame = 1 

Query: 19  VSMEENKQRKWKRKGTSSSSPS------VNSLDDGCLMHIFSFLSPIPDRYNTALVCHRW 78
           V  E+ KQ KWKR+ +SSSS S      +N+LDDGCLMHIFSFL PIPDRYNTALVCHRW
Sbjct: 3   VEEEKIKQTKWKRRSSSSSSSSKSSSCLINNLDDGCLMHIFSFLPPIPDRYNTALVCHRW 62

Query: 79  RYLACHPRLWLRVERSIKD-LSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQITK 138
            +LACHPRLWLRVERS+KD L EPGVFP IE AVAAARPGDTILIA GG H ASNIQI K
Sbjct: 63  LFLACHPRLWLRVERSVKDRLEEPGVFPDIETAVAAARPGDTILIAAGGRHLASNIQIKK 122

Query: 139 PLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDGCV 198
            LCLIGGGELP+ETTLFC+R S+SALE LST KL+NLTVKAELGCCLLHR GRL ++GCV
Sbjct: 123 RLCLIGGGELPDETTLFCSRASDSALELLSTCKLANLTVKAELGCCLLHRNGRLTIEGCV 182

Query: 199 LQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAKAVLTSEDLTLQ 258
           LQCESNPLD+LSCPIV TAS   + PSSVK     GVSV  TRIEGGAKAVLTS DLTLQ
Sbjct: 183 LQCESNPLDHLSCPIVSTASAQTVFPSSVKCS-KDGVSVFRTRIEGGAKAVLTSGDLTLQ 242

Query: 259 HVRVIYARTALFFWFDVEYK 272
            VRVIYART++FFWFDVE++
Sbjct: 243 RVRVIYARTSIFFWFDVEHQ 261

[Close]
BLAST of CSPI05G27510 vs. TrEMBL
Match: A0A061FS52_THECC (SKP1/ASK-interacting protein 5 isoform 1 OS=Theobroma cacao GN=TCM_045324 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.5e-105
Identity = 197/262 (75.19%), Postives = 217/262 (82.82%), Query Frame = 1 

Query: 18  IVSMEENKQRKWKRKG-----TSSSSPS---VNSLDDGCLMHIFSFLSPIPDRYNTALVC 77
           +   E  K RK KR       +SSSS S   +NSLDDGCLMHIFSFLSPIPDRYNTALVC
Sbjct: 3   VEEQEGRKSRKMKRSNKNERISSSSSSSFAPINSLDDGCLMHIFSFLSPIPDRYNTALVC 62

Query: 78  HRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQI 137
           HRW YLACHP+LWLRV+RS+KD SEPGVFP IE AV+AARPGDTILIA GG H ASNIQI
Sbjct: 63  HRWHYLACHPQLWLRVDRSLKDFSEPGVFPNIEEAVSAARPGDTILIAAGGSHLASNIQI 122

Query: 138 TKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDG 197
            KPLCLIGGGELP+ETTL C RGS+SALEFLST KL+NLTVKAELGCCLLHR GRLI+D 
Sbjct: 123 RKPLCLIGGGELPDETTLLCLRGSDSALEFLSTCKLTNLTVKAELGCCLLHRSGRLIIDE 182

Query: 198 CVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAKAVLTSEDLT 257
           C+LQCESNPLDYLSCPIV TA   ++ PS++K   +  VSVSHTRIEGGAKAVLTS DL 
Sbjct: 183 CILQCESNPLDYLSCPIVSTAG-SEVFPSNLKSHRSDCVSVSHTRIEGGAKAVLTSGDLA 242

Query: 258 LQHVRVIYARTALFFWFDVEYK 272
           LQ VRVIYART+L+FWFDV+ K
Sbjct: 243 LQRVRVIYARTSLYFWFDVDCK 263

[Close]
BLAST of CSPI05G27510 vs. TrEMBL
Match: A0A067L7M8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24514 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.6e-105
Identity = 190/253 (75.10%), Postives = 216/253 (85.38%), Query Frame = 1 

Query: 21  MEENKQRKWKRKGTSSSSPS--VNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRYLACH 80
           MEE  +RKWK+K  +SSS S  +N+LDDGCLMHIFSFLSPIPDRYNTALVCHRW YLACH
Sbjct: 1   MEEEVKRKWKQKKPASSSNSSLINTLDDGCLMHIFSFLSPIPDRYNTALVCHRWHYLACH 60

Query: 81  PRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQITKPLCLIGG 140
           PRLWLRV+R++KDLSEPGV+P+IE AV+AARPGDTILI+ GG H ASNIQI KPLCLIGG
Sbjct: 61  PRLWLRVDRAVKDLSEPGVYPSIEMAVSAARPGDTILISAGGNHVASNIQINKPLCLIGG 120

Query: 141 GELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDGCVLQCESNP 200
           GELP++TTL C+RGS+SALEFLST KL+NLTVK ELGCCLLHR GRL +DGC+LQCESNP
Sbjct: 121 GELPDQTTLLCSRGSDSALEFLSTCKLANLTVKTELGCCLLHRSGRLTIDGCILQCESNP 180

Query: 201 LDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAKAVLTSEDLTLQHVRVIYA 260
           LDYLSCPIV TA  +++  SSVK     GV VS TRIEGGAKAVLT  DL L  VRVIY+
Sbjct: 181 LDYLSCPIVSTAGENEIFSSSVKTD-GDGVHVSQTRIEGGAKAVLTKGDLALHRVRVIYS 240

Query: 261 RTALFFWFDVEYK 272
           R  ++FWFDVE+K
Sbjct: 241 RAYVYFWFDVEHK 252

[Close]
BLAST of CSPI05G27510 vs. TrEMBL
Match: D7TXB8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0139g00260 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 7.9e-105
Identity = 197/257 (76.65%), Postives = 221/257 (85.99%), Query Frame = 1 

Query: 21  MEENKQRKWK-RKGTSSSSPSVNS-----LDDGCLMHIFSFLSPIPDRYNTALVCHRWRY 80
           MEE  +RKWK RK ++SS P+ NS     LDDGCLMHIFSFLSPIPDRYNTALVCHRW Y
Sbjct: 1   MEE--KRKWKHRKSSTSSIPNSNSSSIHNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHY 60

Query: 81  LACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQITKPLC 140
           LACHPRLWLRV+RS+KD SEPGVFP+IE AV+AARPGDTILIA GG H ASNIQI KPLC
Sbjct: 61  LACHPRLWLRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASNIQIKKPLC 120

Query: 141 LIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDGCVLQC 200
           LIGGGELP++TTL C+RGS+SALEFLST K++NLTVKAELGCCLLHR GRL +DGC+LQC
Sbjct: 121 LIGGGELPDDTTLLCSRGSDSALEFLSTCKVANLTVKAELGCCLLHRSGRLTIDGCILQC 180

Query: 201 ESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHG--VSVSHTRIEGGAKAVLTSEDLTLQH 260
           ESNPLDYLSCPIV TA+  ++L SSVK   +HG  VSVS TRIEGGAKAV+TS  L LQ 
Sbjct: 181 ESNPLDYLSCPIVSTAAGPEILTSSVK---SHGDSVSVSRTRIEGGAKAVVTSGSLALQR 240

Query: 261 VRVIYARTALFFWFDVE 270
           VRVIYART++FFWFDV+
Sbjct: 241 VRVIYARTSIFFWFDVD 252

[Close]
BLAST of CSPI05G27510 vs. TAIR10
Match: AT3G54480.1 (AT3G54480.1 SKP1/ASK-interacting protein 5)

HSP 1 Score: 347.8 bits (891), Expect = 6.0e-96
Identity = 171/255 (67.06%), Postives = 202/255 (79.22%), Query Frame = 1 

Query: 26  QRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 85
           + K K++    S  S+N+LDDGCLMHI SFLSPIPDRYNTALVCHRWRYLACHPRLWLRV
Sbjct: 20  ESKMKKRMKPYSLTSLNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 79

Query: 86  ERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQITKPLCLIGGGELPEET 145
           +R +KDLS+PGVF  IE+AV+AARPGDTILI  GG +  SNIQI KPLCL+GGGE+P+ET
Sbjct: 80  DRFVKDLSQPGVFLNIESAVSAARPGDTILIVAGGNYRVSNIQIKKPLCLVGGGEIPDET 139

Query: 146 TLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDGCVLQCESNPLDYLSCP 205
           TL C RGS+SALE LST KL+NLTVKAELGCCLLHR GRL +DGCVLQCE+NPLD+LSCP
Sbjct: 140 TLVCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCP 199

Query: 206 IVCTASPDKL--------LPSSVKGGY-THGVSVSHTRIEGGAKAVLTSEDLTLQHVRVI 265
           IV TA  + +        +  +V G    + V+V  TRIEGGAKAV T  DL LQ VRV+
Sbjct: 200 IVSTAGDEDIENILSHVEVKETVTGKIKANSVTVLQTRIEGGAKAVSTRGDLVLQRVRVM 259

Query: 266 YARTALFFWFDVEYK 272
           Y++  L+FWFDV+Y+
Sbjct: 260 YSKAYLYFWFDVDYE 274

[Close]
BLAST of CSPI05G27510 vs. NCBI nr
Match: gi|449449332|ref|XP_004142419.1| (PREDICTED: F-box protein SKIP5 isoform X1 [Cucumis sativus])

HSP 1 Score: 547.7 bits (1410), Expect = 1.1e-152
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1 

Query: 1   MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP 60
           MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP
Sbjct: 1   MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP 60

Query: 61  DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG 120
           DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG
Sbjct: 61  DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG 120

Query: 121 VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH 180
           VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH
Sbjct: 121 VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH 180

Query: 181 RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK 240
           RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK
Sbjct: 181 RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK 240

Query: 241 AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 273
           AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL
Sbjct: 241 AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 272

[Close]
BLAST of CSPI05G27510 vs. NCBI nr
Match: gi|659092178|ref|XP_008446937.1| (PREDICTED: F-box protein SKIP5 isoform X1 [Cucumis melo])

HSP 1 Score: 544.3 bits (1401), Expect = 1.2e-151
Identity = 270/272 (99.26%), Postives = 271/272 (99.63%), Query Frame = 1 

Query: 1   MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP 60
           MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP
Sbjct: 1   MAKADMSRVVKDQSRVAIVSMEENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIP 60

Query: 61  DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGG 120
           DRYNTALVCHRWRYLACHPRLWLRVER+IKDLSEPGVFPTIEAAVAAARPGDTILIATGG
Sbjct: 61  DRYNTALVCHRWRYLACHPRLWLRVERTIKDLSEPGVFPTIEAAVAAARPGDTILIATGG 120

Query: 121 VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH 180
           VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH
Sbjct: 121 VHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLH 180

Query: 181 RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK 240
           RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK
Sbjct: 181 RKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAK 240

Query: 241 AVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 273
           AVLTSEDLTLQHVRVIYARTAL FWFDVEYKL
Sbjct: 241 AVLTSEDLTLQHVRVIYARTALLFWFDVEYKL 272

[Close]
BLAST of CSPI05G27510 vs. NCBI nr
Match: gi|778706759|ref|XP_011655907.1| (PREDICTED: F-box protein SKIP5 isoform X2 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 8.1e-119
Identity = 213/219 (97.26%), Postives = 214/219 (97.72%), Query Frame = 1 

Query: 54  SFLSPIPDRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDT 113
           +F     DRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDT
Sbjct: 15  TFAIEFADRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDT 74

Query: 114 ILIATGGVHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAE 173
           ILIATGGVHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAE
Sbjct: 75  ILIATGGVHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAE 134

Query: 174 LGCCLLHRKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHT 233
           LGCCLLHRKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHT
Sbjct: 135 LGCCLLHRKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHT 194

Query: 234 RIEGGAKAVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 273
           RIEGGAKAVLTSEDLTLQHVRVIYARTALFFWFDVEYKL
Sbjct: 195 RIEGGAKAVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 233

[Close]
BLAST of CSPI05G27510 vs. NCBI nr
Match: gi|659092180|ref|XP_008446939.1| (PREDICTED: F-box protein SKIP5 isoform X2 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 8.9e-118
Identity = 211/219 (96.35%), Postives = 213/219 (97.26%), Query Frame = 1 

Query: 54  SFLSPIPDRYNTALVCHRWRYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDT 113
           +F     DRYNTALVCHRWRYLACHPRLWLRVER+IKDLSEPGVFPTIEAAVAAARPGDT
Sbjct: 15  TFAIEFADRYNTALVCHRWRYLACHPRLWLRVERTIKDLSEPGVFPTIEAAVAAARPGDT 74

Query: 114 ILIATGGVHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAE 173
           ILIATGGVHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAE
Sbjct: 75  ILIATGGVHSASNIQITKPLCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAE 134

Query: 174 LGCCLLHRKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHT 233
           LGCCLLHRKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHT
Sbjct: 135 LGCCLLHRKGRLIVDGCVLQCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHT 194

Query: 234 RIEGGAKAVLTSEDLTLQHVRVIYARTALFFWFDVEYKL 273
           RIEGGAKAVLTSEDLTLQHVRVIYARTAL FWFDVEYKL
Sbjct: 195 RIEGGAKAVLTSEDLTLQHVRVIYARTALLFWFDVEYKL 233

[Close]
BLAST of CSPI05G27510 vs. NCBI nr
Match: gi|1009118882|ref|XP_015876085.1| (PREDICTED: F-box protein SKIP5 [Ziziphus jujuba])

HSP 1 Score: 391.7 bits (1005), Expect = 1.0e-105
Identity = 199/259 (76.83%), Postives = 221/259 (85.33%), Query Frame = 1 

Query: 18  IVSMEENKQRKWKRKGTSSSSP-----SVNSLDDGCLMHIFSFLSPIPDRYNTALVCHRW 77
           +V  E NK+R+    G+SSSS       VNSLDDGCLMHIFSFLSPIPDRYNTALVCHRW
Sbjct: 3   VVEEENNKRRRKWMSGSSSSSSYHSSVPVNSLDDGCLMHIFSFLSPIPDRYNTALVCHRW 62

Query: 78  RYLACHPRLWLRVERSIKDLSEPGVFPTIEAAVAAARPGDTILIATGGVHSASNIQITKP 137
           R+LACHPRLWLRV+RS+KDLSEPGVFP IEAAVAAARPGDTILIA GG H ASNI+I KP
Sbjct: 63  RFLACHPRLWLRVDRSVKDLSEPGVFPDIEAAVAAARPGDTILIAAGGRHRASNIRINKP 122

Query: 138 LCLIGGGELPEETTLFCTRGSESALEFLSTSKLSNLTVKAELGCCLLHRKGRLIVDGCVL 197
           LCL+GGGELP+ET L C+RGS+SA EFLST KL+NLTVKAELGCCLLHR GRL +D CVL
Sbjct: 123 LCLVGGGELPDETMLLCSRGSDSAFEFLSTCKLANLTVKAELGCCLLHRSGRLTIDSCVL 182

Query: 198 QCESNPLDYLSCPIVCTASPDKLLPSSVKGGYTHGVSVSHTRIEGGAKAVLTSEDLTLQH 257
           QCESNPLD+LSCPIV TAS  ++  SSVK  ++ GVSVS TRIEGGAKAVLTS DL LQ 
Sbjct: 183 QCESNPLDHLSCPIVSTASA-QVFSSSVK-CHSDGVSVSRTRIEGGAKAVLTSGDLALQR 242

Query: 258 VRVIYARTALFFWFDVEYK 272
           VRVIYART+LFFWFDVE++
Sbjct: 243 VRVIYARTSLFFWFDVEHQ 259

The following BLAST results are available for this feature:
BLAST of CSPI05G27510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKIP5_ARATH1.1e-9467.06F-box protein SKIP5 OS=Arabidopsis thaliana GN=SKIP5 PE=1 SV=1[more]
BLAST of CSPI05G27510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRR7_CUCSA7.8e-153100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623720 PE=4 SV=1[more]
M5XEU9_PRUPE2.7e-10576.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010167mg PE=4 SV=1[more]
A0A061FS52_THECC3.5e-10575.19SKP1/ASK-interacting protein 5 isoform 1 OS=Theobroma cacao GN=TCM_045324 PE=4 S... [more]
A0A067L7M8_JATCU4.6e-10575.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24514 PE=4 SV=1[more]
D7TXB8_VITVI7.9e-10576.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0139g00260 PE=4 SV=... [more]
BLAST of CSPI05G27510 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54480.16.0e-9667.06 SKP1/ASK-interacting protein 5[more]
BLAST of CSPI05G27510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449332|ref|XP_004142419.1|1.1e-152100.00PREDICTED: F-box protein SKIP5 isoform X1 [Cucumis sativus][more]
gi|659092178|ref|XP_008446937.1|1.2e-15199.26PREDICTED: F-box protein SKIP5 isoform X1 [Cucumis melo][more]
gi|778706759|ref|XP_011655907.1|8.1e-11997.26PREDICTED: F-box protein SKIP5 isoform X2 [Cucumis sativus][more]
gi|659092180|ref|XP_008446939.1|8.9e-11896.35PREDICTED: F-box protein SKIP5 isoform X2 [Cucumis melo][more]
gi|1009118882|ref|XP_015876085.1|1.0e-10576.83PREDICTED: F-box protein SKIP5 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR001810F-box_dom
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR001810F-box_dom
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005515protein binding
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G27510.1CSPI05G27510.1mRNA
CSPI05G27510.3CSPI05G27510.3mRNA
CSPI05G27510.2CSPI05G27510.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 21..56
score: 7.7
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 56..192
score: 4.3
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 58..152
score: 4.
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 21..43
score: 5.