CSPI05G18760 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G18760
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionNADH dehydrogenase (ubiquinone)s
LocationChr5 : 19852039 .. 19857282 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAGGGTAATAAAGTAATTTTCGATGTAGTTGAGGAGAAGCTGAAAACTGGGAAGAGGGGAAGGGAAAGTCGGAAGTGCGCAATTTTGGATCTTTAAACTCGAAGAAGGAGAAAGAAATCAGAGCAAGCAATCTTCAATGGCCAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTTCCAATCAGTTCCGTCACGCCACTCCTGGCCTCGGCATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCTTCTTCTTCTCACCACCACCATTCCAATGCATCCTCCGCCACCCATTAACTTCTACCGGTGATTTCTCCATCTCTTCACTTCCTTTTCCATTCCAATACTTTCTTCCCCGTGCCGTCACGTTGAACTTTTTTCGTGTTTGAATCGAATCATACATATTCATTTTCCCCTTATCTGTGTGTTTTCATTCTAAATTTTGTCACACTGTCATCTGAATGAATGAAGAACAGAACAAACTTGTTCTTTTCCTTCATCTTCCTAGGTCTAGATTGTCCATTATGTCGGGATGCTCTAAAAATTTGTGTATATGTGTGATTATTATTTCTTTAAACTATTGTTTGGACGATTTTCTCTCTTTTACAATCTTTGTATGTGGACTGGAACTTCTTGGACAAAGTCCTAGAGATAAAGGGATTTGGGTATATGTGGAGGCTTAGATATGAAATTGTATTAGGTTAGTAAAATTTCCATTTTTGTCGGTGGAAAGCTCTGAGGCGAAATCTTTGCCTCAAGGGGTCTTAAGCAGCGAGATCCTCTATCACTCTTTCTCTTTGTCTTATTGCTAGATGTTCTAACCATGTTCATGTTGTTCTGCGTGGAGAATATGGGGGTAAAGGAGTTTAAGGTGGGGAATGATTTAATGCATCTATCACATTTATGGACAGGAAAGACTTTGTTTTTCTTTTTGTTAATCTTATTGGGTTTTCTTTTTGAAATTATTTCTGACCTTGGGATGGGCAATAGCTCCATCGTAGGCTTAAAATGTTGTTTTTCTAAGTTGAGTTCTTAGGCTTTTTGGAAGGTGTCAGTGAGGGGTGAGGGTCCCATTTGGTTAGGTGGGAGGTTGTGATGAGATGGTGGAGCTAGGAGGTTAGAGATTGGGAGCTTGAGATTACATAAGGACCATTTGGTAAAATGGTTACAGAAGTTCTTGGTGGAGCTTAATGCTTTGTGGTACAGAAGCTATTTTCATTTTTCAGTAGGTATGTTCCATACACCCTCTAAATGGGTTTCAATTGGTGGGTTTTTTAATAAAGGAAACAGTACTTTCCATTGAATATTGTCATGTAGCATTGCTTGTCTTGAAAAATTCATTTGATTCTTTGAAAAATAGTACTCAAAGATAAGATATTGAAACCTTTAAATAACCACCTAACAAAGATAACAAAATGAGGGAGACAATAAGTGAGATGGAAGCTTTAACAAGACTTGAATAGAGAATTGTATCCCGATGGGAACCGTATGTATTATGAAGTAAACTTTATTGATAGTATCTAGTCAATGACTTTACATGTAGGGAATTCTGCTCTTCTGTATATTGTCTTTCAAAGATGCACAGAAGTCTCTCTCTATTTACTAACTACTATTTTTGCCTCCTCTTTCTTTCTTAGCCTCTCTTTTTATTACCGGAGTACTAACGGAATTAAATAACTTCTTAACTTCCTGACTAACTGTTAACCAACTTCTTAACTTCCTGACGAACTGTTTTGGCTAACAGTCTACTAACTAGCTTTCTTTCTTCTACTATATTGGTATATGATGGGGGGTCTATCATATCCATTGGAGGAGAGGCAACCAAATGCTTGTAATGAGAGTTATGGAAAACAGACTTCAGGTACACAAAACATGGTGATCAACCACTCTTTTACCCTCTTATGAACTCAACGAATGCTGAAAATCCAGTGCTTGATATCCTTCAGATACCGTCTAGAAAGAGAGAAATTGCAACCCAATGGGCTGTTTCCAAGGCCAAGCTTAAACCAAAAAAAAAAAAGAGATTCAACTTGCTGTGGATGCTTTTTGCCATTTTGCACAAAAAAGTATAATTTGGAAATATCTAGCCCCAATTGGCCTGGAATGCCAAATAACTATTTTCCAAACCATCAAAACCAAGGCCTCAGCATATTCAAAGTAAGACTTCCGTCACGACACATGTTGAAGCTTATTCATCGATCCTATTTCTCCTAAATTACTCTAACCAGATTTTGATTTTGAAGGAACTTTTTCAAAGAAACGTGCTAGGAAAAGTCACCTAGCACTTAAAGGTAACACAAAATGAAAGTCACAATGAGAATATCCAAAAATTTCATTGTAGGGTCAACAGGGGAGAAACTTTACACAATTGGAGTCCACAAGCTTCCACTATGGAGCAAAGATCATATGGAATTTGAGAAGGTGGCAGGAGAGAAAAATTTACTTTTGATTTGTGGACATCGAGTCTTTCAACTGATTTTTGAAATAGTTTGCTTAACCTTCCCCATATTGTTCTTCTGAGAACTATGCTTTTGTCACTGGTGTCAAAGAATGAAATTCATCTTCCTCTCTGCTCACACTAACAATTGAACCATCATCAGACACAATAGGAGATGGAAGGAGTACCACAATCAAATTGAATAGATGAATCCATAAAAGAAATGGTTGATTGTCTTAATCTTTGGAGGAGTGAAACAGTTTTTGCAGGCTTGAATGAAGATTGTTACACTTTTATGTGTGAAACCTGAGCACAAATGCAACAAACTTCGATTGAGTTATTATTGATCTCTCATGGTTTGGAGAAATGGTGAGACGTTTGTTTACGTGAGATTTGAGTAATGAAGTGGAAGAGCTGAAATGAACTTTTTATCTTTTTCAGTTTTGGTGCCCAAAAAATAAAATTACGTAGATGTTCCTCTTCTAAGTAATTTTATAAAATGGATTGGTTATCTTTGAGTAAGTGACGAGAGATAGGGTCTTTAACTGAAGTCTGTTGGGCTTATAAATTAATGACCATAAAATTTTCGGAAGAGGGGAGAGGGAATAATTTTTTCTTTGAAACTGAAGAGAAAAAATATTAGTGATAACTAAGTATTAGCAACAACCTTGACCATCTATATTCATTGTTTCTTTTTGTGGTTATGCACTCTTCATGCATCAAAGAAACGGTTGGAGCCTTCTATAATATGAGAAAATCATCTTCACAGACCAATATGCTATATTCAACTAAGAACTCTTCATCTTTCAGTGTTTTTAGCAGTGAGGGAGTGGAGCAATTGGATAGGTCAACAAAGCTTGAGAGAGAAAATTTTTGACCCTTTAGAAACAGATCTCAATGCCTTTGTTTCAATGCGAGGAAGAGCCAAAATCTGCCAATTTGCCTTCTACAACTCGCCCCTATCCTCAGTCTTGCTAAGTTCTAGATCATTTAAAGCCAATAGTATCTGCTTGTGAAATTATTCTGATATGATTTTTCAGCCGCAAAATGTATTTTTCCAGATTTTGGTCCAACTTCAGTCTTTCTGGGTTTTCTTTTCTTGTGGGTGGCGAGTAAAGCCTCTTTGCTGATTTGATATTTTGAAAGTCTTTTTCGAGCCTTCTCTGGTTTTTGGACTACTATGGCATGAAAGCTACGAGGCTACTGGTTTCATCTTCTTGCAAGTCTTTAGATTTGAATGGGCTCCTTGTGAGAGAGATCTTTCATTTTGCTTTATATTTAGATTACTTCGGTCTGTTTCTGTTTACCTTAAATTTTTCTGTTGGTATTCGCTTATTAGCTTGTCATCTCTTTTGTTTGCCTAAGTTTAGCTTTTGTTGTAGTCATTGACTGAATTTTTCTCCATTCTCTAAGTCACATTTATTAATAATAAATAAAGAGGCTTGTCTCCATTTAAAAAAAAAAAATCATCTGAAAAGCTGTTACTTCTAATTCCCTTCCTTTTGATCACCATCTATGTTCATTGTTTCTTTTTGTGGTTATAACATTGGTCGAACGATAGATTGCATCCATCGGCCTTCCTCTAAATCTTTAGTCTTTGATTTTCGCTTTCTGATAGAGACAACACAAGTGGCTGTTCTTCTTTCCCTCTTTCCTAGCCAACACCCATCTCCTTGTTTACACATGTACAACCATCCCTACAAATAAGTTCAAATCTTGTGTTCTCTCTTTCTATTGTTTTTCCACATTGGCTGCCCCTTTCTCCGCCTCAAGCTGCCTTTGTTTTCTCCACTCTTTGGGAAGGTTAAAATTTGTTAGAAAGTCAGAGATTTGTGTAGCGTGTACTTTATGTTGCACTTGCTATGGCTGATTCTTTGTAGCCGACAGGAGGAAGACTTTGACCATATCCTATGGGGGATTGTGAGTTTGCGCAATCTATTTGGAATGATTGACAAGCTTGTTTGTTTTATGTTTGACCTGGAGTAGAGCTTTGTTACTTTATGTTGGAGGAGGTGAAATCTTAGTTCTCCATTTTGAGACAAGGGCAAAGTTTTTGTGGCATGCTAGTTTCTTTGTAGGCATTTGACTCGAGAGAGGAATAACTCAAACTTTAGAGAGGTGGAGAAATCGTGTGAGGAAGTTTGAGAAGCTCTCAATAAAAAAGCTTGGTTTCGTCAAAAAAAAAAAAAAAACCAAAACAAAAGAAGTAGAAGTAAAATAAAATGAAATAAAGAAAGTGGGAGTTGTATATAAAATAACATTTTACACTTACCTTTGATTGTAATTTGTCAATTGGATAGATGTCTAAATATGATAATATAGAACTTTTTCTTGATATGCAAGTGTTATATTCATAAGATGCTTCCTATACGATTTTGCAGATGCATTCCTGCTAGGTGAATCCAAGCTTGGAGTTCTATAGCACTCGTTCTCTTTTACTTTTACTTTCTTTTTTTATGTGCAATAAAAGTAAAACTTTTGCTGGACGAAGCTTGTGAATGTATTTGATGAAGTTGGGATTGAAATTTCCATCACTAACTGAAATGTTTAATTTTACAATCTAGTGGTTCAAGCAATTCCTTTTGCTCATGGCCAGTGATGAGGTTTCCTTTTATTTCCTTTTATTAAATATGATTTTAAGTTTATGTTCCTTGCCGACCCCAGGAAAGCTTATTATATATTAGTACTTCTGTTTATTTGATCTTCTTTTTCACTTTCTGAACCTCATTTGGTCCAGCAT

mRNA sequence

ATGGCCAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTTCCAATCAGTTCCGTCACGCCACTCCTGGCCTCGGCATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCTTCTTCTTCTCACCACCACCATTCCAATGCATCCTCCGCCACCCATTAA

Coding sequence (CDS)

ATGGCCAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTTCCAATCAGTTCCGTCACGCCACTCCTGGCCTCGGCATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCTTCTTCTTCTCACCACCACCATTCCAATGCATCCTCCGCCACCCATTAA
Homology
[Close]
BLAST of CSPI05G18760 vs. Swiss-Prot
Match: NDB3B_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B OS=Arabidopsis thaliana GN=At1g14450 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.5e-24
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S 
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGLGIGVAAFCVYLVGEQIYNKALAPSKSS 62

Query: 64 HHHSNASSATH 75
          HHH   ++ +H
Sbjct: 63 HHHQEQTAPSH 73

[Close]
BLAST of CSPI05G18760 vs. Swiss-Prot
Match: NDB3A_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A OS=Arabidopsis thaliana GN=At2g02510 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.6e-21
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS  
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGIGIGVGAFCVYLVGEQIYSKLMAPSSQS 62

Query: 64 HH 66
           H
Sbjct: 63 SH 64

[Close]
BLAST of CSPI05G18760 vs. TrEMBL
Match: A0A0A0KR92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528700 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60
          MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60

Query: 61 SSHHHHSNASSATH 75
          SSHHHHSNASSATH
Sbjct: 61 SSHHHHSNASSATH 74

[Close]
BLAST of CSPI05G18760 vs. TrEMBL
Match: A0A0B0NDD3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_04523 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.2e-28
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLGSTGEFF+RRDEWRKHPMLSNQ RHATPGLGIALVAFGIYLVGEQVYNRI +PSSSH
Sbjct: 3  KPLGSTGEFFKRRDEWRKHPMLSNQLRHATPGLGIALVAFGIYLVGEQVYNRIYAPSSSH 62

Query: 64 HHHSNASSATH 75
          HH   +SS +H
Sbjct: 63 HHQQQSSSHSH 73

[Close]
BLAST of CSPI05G18760 vs. TrEMBL
Match: A0A0D2QHQ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G167700 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.2e-28
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLGSTGEFF+RRDEWRKHPMLSNQ RHATPGLGIALVAFGIYLVGEQVYNRI +PSSSH
Sbjct: 3  KPLGSTGEFFKRRDEWRKHPMLSNQLRHATPGLGIALVAFGIYLVGEQVYNRIYAPSSSH 62

Query: 64 HHHSNASSATH 75
          HH   +SS +H
Sbjct: 63 HHQQQSSSHSH 73

[Close]
BLAST of CSPI05G18760 vs. TrEMBL
Match: B9S045_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1297890 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.5e-26
Identity = 56/66 (84.85%), Postives = 64/66 (96.97%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG+TGEFF+RRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVY+++ +PSSSH
Sbjct: 3  KPLGTTGEFFKRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYDKLYAPSSSH 62

Query: 64 HHHSNA 70
          HH S++
Sbjct: 63 HHSSSS 68

[Close]
BLAST of CSPI05G18760 vs. TrEMBL
Match: A0A061G8N9_THECC (NADH dehydrogenase (Ubiquinone)s OS=Theobroma cacao GN=TCM_027149 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.5e-25
Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG TGEFFRRRDEWRKHPML NQ RHATPGLGIALVAFGIYLVGEQVYNR+ +PSSSH
Sbjct: 3  KPLGPTGEFFRRRDEWRKHPMLGNQLRHATPGLGIALVAFGIYLVGEQVYNRVYAPSSSH 62

Query: 64 H 65
          H
Sbjct: 63 H 63

[Close]
BLAST of CSPI05G18760 vs. TAIR10
Match: AT1G14450.1 (AT1G14450.1 NADH dehydrogenase (ubiquinone)s)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-25
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S 
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGLGIGVAAFCVYLVGEQIYNKALAPSKSS 62

Query: 64 HHHSNASSATH 75
          HHH   ++ +H
Sbjct: 63 HHHQEQTAPSH 73

[Close]
BLAST of CSPI05G18760 vs. TAIR10
Match: AT2G02510.1 (AT2G02510.1 NADH dehydrogenase (ubiquinone)s)

HSP 1 Score: 101.7 bits (252), Expect = 2.1e-22
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPMLSNQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS  
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGIGIGVGAFCVYLVGEQIYSKLMAPSSQS 62

Query: 64 HH 66
           H
Sbjct: 63 SH 64

[Close]
BLAST of CSPI05G18760 vs. NCBI nr
Match: gi|778703796|ref|XP_011655428.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60
          MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60

Query: 61 SSHHHHSNASSATH 75
          SSHHHHSNASSATH
Sbjct: 61 SSHHHHSNASSATH 74

[Close]
BLAST of CSPI05G18760 vs. NCBI nr
Match: gi|659121279|ref|XP_008460580.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-34
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60
          MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60

Query: 61 SSHHHHSNASSATH 75
          SSHHHHS+ASSATH
Sbjct: 61 SSHHHHSDASSATH 74

[Close]
BLAST of CSPI05G18760 vs. NCBI nr
Match: gi|823224383|ref|XP_012444958.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-27
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLGSTGEFF+RRDEWRKHPMLSNQ RHATPGLGIALVAFGIYLVGEQVYNRI +PSSSH
Sbjct: 3  KPLGSTGEFFKRRDEWRKHPMLSNQLRHATPGLGIALVAFGIYLVGEQVYNRIYAPSSSH 62

Query: 64 HHHSNASSATH 75
          HH   +SS +H
Sbjct: 63 HHQQQSSSHSH 73

[Close]
BLAST of CSPI05G18760 vs. NCBI nr
Match: gi|255556661|ref|XP_002519364.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 124.8 bits (312), Expect = 6.4e-26
Identity = 56/66 (84.85%), Postives = 64/66 (96.97%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG+TGEFF+RRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVY+++ +PSSSH
Sbjct: 3  KPLGTTGEFFKRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYDKLYAPSSSH 62

Query: 64 HHHSNA 70
          HH S++
Sbjct: 63 HHSSSS 68

[Close]
BLAST of CSPI05G18760 vs. NCBI nr
Match: gi|590615218|ref|XP_007023161.1| (NADH dehydrogenase (ubiquinone)s [Theobroma cacao])

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-25
Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 1 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63
          KPLG TGEFFRRRDEWRKHPML NQ RHATPGLGIALVAFGIYLVGEQVYNR+ +PSSSH
Sbjct: 3  KPLGPTGEFFRRRDEWRKHPMLGNQLRHATPGLGIALVAFGIYLVGEQVYNRVYAPSSSH 62

Query: 64 H 65
          H
Sbjct: 63 H 63

The following BLAST results are available for this feature:
BLAST of CSPI05G18760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDB3B_ARATH3.5e-2469.01NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B OS=Arabidopsis tha... [more]
NDB3A_ARATH3.6e-2170.97NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A OS=Arabidopsis tha... [more]
BLAST of CSPI05G18760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR92_CUCSA1.4e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528700 PE=4 SV=1[more]
A0A0B0NDD3_GOSAR8.2e-2885.92Uncharacterized protein OS=Gossypium arboreum GN=F383_04523 PE=4 SV=1[more]
A0A0D2QHQ5_GOSRA8.2e-2885.92Uncharacterized protein OS=Gossypium raimondii GN=B456_009G167700 PE=4 SV=1[more]
B9S045_RICCO4.5e-2684.85Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1297890 PE=4 SV=1[more]
A0A061G8N9_THECC6.5e-2590.16NADH dehydrogenase (Ubiquinone)s OS=Theobroma cacao GN=TCM_027149 PE=4 SV=1[more]
BLAST of CSPI05G18760 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14450.12.0e-2569.01 NADH dehydrogenase (ubiquinone)s[more]
AT2G02510.12.1e-2270.97 NADH dehydrogenase (ubiquinone)s[more]
BLAST of CSPI05G18760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703796|ref|XP_011655428.1|2.0e-35100.00PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|659121279|ref|XP_008460580.1|1.7e-3497.30PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|823224383|ref|XP_012444958.1|1.2e-2785.92PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|255556661|ref|XP_002519364.1|6.4e-2684.85PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|590615218|ref|XP_007023161.1|9.3e-2590.16NADH dehydrogenase (ubiquinone)s [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012576NDUFB3
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0005747mitochondrial respiratory chain complex I
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G18760.1CSPI05G18760.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3PFAMPF08122NDUF_B12coord: 15..66
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G18760Cla001879Watermelon (97103) v1cpiwmB447
CSPI05G18760MELO3C022919Melon (DHL92) v3.5.1cpimeB374
CSPI05G18760Lsi11G001030Bottle gourd (USVL1VR-Ls)cpilsiB339
CSPI05G18760CsaV3_5G027560Cucumber (Chinese Long) v3cpicucB284
CSPI05G18760BhiUN159G40Wax gourdcpiwgoB495
CSPI05G18760Cucsa.011660Cucumber (Gy14) v1cgycpiB296
CSPI05G18760CmaCh04G018930Cucurbita maxima (Rimu)cmacpiB766
CSPI05G18760Carg26172Silver-seed gourdcarcpiB0312
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G18760Cucurbita moschata (Rifu)cmocpiB764
CSPI05G18760Cucumber (Chinese Long) v2cpicuB239
CSPI05G18760Watermelon (Charleston Gray)cpiwcgB376
CSPI05G18760Cucurbita pepo (Zucchini)cpecpiB458
CSPI05G18760Melon (DHL92) v3.6.1cpimedB366
CSPI05G18760Cucumber (Gy14) v2cgybcpiB225
CSPI05G18760Cucumber (Chinese Long) v3cpicucB294
CSPI05G18760Watermelon (97103) v2cpiwmbB380