CSPI05G18560 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G18560
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ATP-dependent clp protease ATP-binding subunit clpx, putative
Location	Chr5 : 19608263 .. 19611354 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAAGGAAATTCAACACCATAGTGAAAAATCTTGTATTCTTTTCAGAAAAATAAAAAGAAAAAAAGAAAAAAATACATGCATATATAACTTCCTAAATGTTGGGATTAATAAATATTTTATTTTATTTTCGTGAGGCAGGGATTAGTGTATTAATGGAGTGACACTGAAATTAAATCGGACAAAACTTCCTGTTTTAAAATTTGTTAATGCATAATTTTAATTAATGTGAATGATTTTTCATCTTCGGCAGATGGATACTAAAAATATTCTCTTCATATGTGGTGGTGCATTTGTTGGCTTGGAGAAGTGCATCTCTGACAGGTACAAAATTGCTTCGTTATAACCAATGAATTTTTGTTTTTCCCCCTTTTATAGTCCATGCATGGAAATTGAATATCAACTCTCTTTCTGCAGGCAGCATGATTCCTCAATTGGATTCGGGGCTCCAGTTCGTGCTAGCATGAGAACTGGTAAATTGACTGAAGATTCAGTGACATCTTCGATGCTTGAAAATGTGAGACCTTAAACCAAAAGTTAAATTGTTGCACTATGAATTACTTTTGTTATCTTACCTTTGGCATTTTCTGAACTGAGGTTTCATTTACTTTCATTTGTTCCCCTCCATTCAACTACTGAAATGAAGGTCTTTTAACTTTTAGGTAGAAAGTGGCGATCTTATTACTTATGGTCTCATACCTGAATTTGTTGGACGATGTCCAATTCTAGTGAGTTTGTCAGCTTTGGATGAGGATCAACTTGTCCAGGTTTGGCTAGTCTTTTGGGTCATCTTTACTTATTTCTTTGCTCTGTTTTGTTACTTAGCTCTGGAAGATATAACAAATTTCTTCATCCTTATCTCTTTAATAGGTTCTTACAAAACCAAAAAATGCGCTTGGGAAACAGTACAAGAAGATGCTTAGAATGAATGATGTAAGTATTTTAGAATGAATGATGTTGGTACAAAATATTATTAATGAACCAAGCATTTATTACATATATGAAATGTTAAGCCAAGTTACTTCTAAGAAAATAAAAGGTAAAATTACAAAGATGGTTCTTATGGTGGGTAGAAAGTTAGAATTTTAGTCCTTATGGTATGATAAAACCTCGTAAATAGTCCCTAACTTTCTCCAAACCATAGGGACCAAATTATAACTTTCTTTAACCATAGGGACCAAATTTACAATTTCCAAAATAAAAACAAAGAATAGGTTTCTAAGAACTTGTTGTAAACCCATTAGTGTTCTTGTGTGTTTACTCCAAGGCTTTTGCAGGTTGAATTACATTTCACCGAGAATGCTTTAAGAATGATTGCGAGGAAAGCAATGAAAAAGAACACAGGCGCTAGGGGATTGAGATCCATTTTAGAAAATATTCTGACAGAAGCTATGTTTGAGGTATCACATTTACGAGTGCAATGTGTTTGTTTATTCCCCATTGAATTTCTATCTTTCTAATTTCAAAATGATGAGTTCCTGAACATGTGCTTTTTCTTTCTTCAAATATTTATAAAATGTCATTACGCTCAGGTTCCAGAAAGTAACAGCATAAAGGCTGTTCTGGTTGATGAAGAAGCTGTTGGATCAGTGGACGCTTCAGGCTGCGGAGCGAAAATTCTTTGTGATGTTGATGAATTAACGCAGTGTTCAAAATCTGAAATAATGAGAAATCTGAAGGTATTTTCTAATGATCTTCACTTGAACTCTTTGTCGTGTTGATCCTTTGCTTTGGTTATGTAACTGATAAGAAACCCTTGGACATTGGATCTAAGAACCATGTTAAACAACGAGACTAAAAGGAATACAACCCCAACAGTCCCAAAACCAATTTGATTTCAACCCCTAAGATAGGCTAGATACAAATTGCAAGAACAATTTTTTTCTCAACTTTTCTTTTTGTGTTGTCTTCATAATTAACTTGTCTTGCTATGTTAATAGCTTGGATCTTTGGATTGAGGATTAGAATTGCCTTATCATTTGGCATCGAGCATAGGTTGCATCTTTGTGGCCTACTCTAGGATTGATTCTCTCTTTCTTGCAAACTATTAATTCTAGGTTTTAGTTTCATCTTATCATTTCTTGTTTTTTGATCGATCGTTCTTCATATCTTTATTCTTCATATCTTTATCTTACTGTTATTACGTTTTACATATCGAAAAAAAAACAAAGTTGTGAAGAAAAGTAAAAAAGAAAAAGAAAAACTTTAGATGAATACAATTTGTAATCTCATTTTGAGAGTTTTTCCTTAATTTGTAATTCTTGTAATAGAATCATGCGAGTCATTCAATCTAACCTTGATCAAGTTTGATTGTGGAGTGATTCAATTAGGACAAGATTTCCAAATATTGCTTCTAGATCTTTTTTATCTAAGAGGTAATCTAATCTTAACTTTCTCTTAGTTGATCTAAATTGGTATAAAGAGGTGTTAATTTCTTATTTCAAATGTTCTTGCTAGTTGATAGCTTAATAGCTTAGATCTTTAGATTGAAGATTAAGATTGCCTTGTCAAATGAATGAGCTTACCATTTCTAATGTCCTAATCTCATGCAACTCATTTCCTTACCTAGTAATAAAATAGAAATAAAAATAAATAAAAATAAAAAATCCAATGTTTTTTCTTTTATTTAAATGTGTGGCATGACAGATTTTCACTGGTGTGCGGTGGAACTAGGCAGCATCTAAGCTATTTTCACTTATTTTCTTATTTGTCCAGCATGTTCCTAAGCATGTCCATGCTAGAAAGTAATGTTTTGTTAGAAAACATTGTTCTCGTGGTGGTACTGAATGAATGATATACGTTTTGTGAGACTGAGGTGAATGATGCCAGCTTAGATTGTACGAAGGTTTTTTCTTCGTTGAATTCTCCTCATCAAATTCAAATTGTTTTAGTGGGTATGAACATACTATCTTTGCCTTGATATACAGGGAAATGATATGGTTGCCGGCAACGAGGGTCGGTTCTCAAATGGAGTCGAGTTTCCATCTGTAGCTATTAGATTGTAAATGGCTTCTGCAGTTGATGATGTAAATTTATTGAACAAATTAGTATCAACAACAACAATCAATAATAAAATGTAAGCCTTCACTTTT

mRNA sequence

ATGATTTTTCATCTTCGGCAGATGGATACTAAAAATATTCTCTTCATATGTGGTGGTGCATTTGTTGGCTTGGAGAAGTGCATCTCTGACAGGCAGCATGATTCCTCAATTGGATTCGGGGCTCCAGTTCGTGCTAGCATGAGAACTGGTAAATTGACTGAAGATTCAGTGACATCTTCGATGCTTGAAAATGTTCTTACAAAACCAAAAAATGCGCTTGGGAAACAGTACAAGAAGATGCTTAGAATGAATGATGTTGAATTACATTTCACCGAGAATGCTTTAAGAATGATTGCGAGGAAAGCAATGAAAAAGAACACAGGCGCTAGGGGATTGAGATCCATTTTAGAAAATATTCTGACAGAAGCTATGTTTGAGGTTCCAGAAAGTAACAGCATAAAGGCTGTTCTGGTTGATGAAGAAGCTGTTGGATCAGTGGACGCTTCAGGCTGCGGAGCGAAAATTCTTTGTGATGTTGATGAATTAACGCAGTGTTCAAAATCTGAAATAATGAGAAATCTGAAGGGAAATGATATGGTTGCCGGCAACGAGGGTCGGTTCTCAAATGGAGTCGAGTTTCCATCTGTAGCTATTAGATTGTAA

Coding sequence (CDS)

ATGATTTTTCATCTTCGGCAGATGGATACTAAAAATATTCTCTTCATATGTGGTGGTGCATTTGTTGGCTTGGAGAAGTGCATCTCTGACAGGCAGCATGATTCCTCAATTGGATTCGGGGCTCCAGTTCGTGCTAGCATGAGAACTGGTAAATTGACTGAAGATTCAGTGACATCTTCGATGCTTGAAAATGTTCTTACAAAACCAAAAAATGCGCTTGGGAAACAGTACAAGAAGATGCTTAGAATGAATGATGTTGAATTACATTTCACCGAGAATGCTTTAAGAATGATTGCGAGGAAAGCAATGAAAAAGAACACAGGCGCTAGGGGATTGAGATCCATTTTAGAAAATATTCTGACAGAAGCTATGTTTGAGGTTCCAGAAAGTAACAGCATAAAGGCTGTTCTGGTTGATGAAGAAGCTGTTGGATCAGTGGACGCTTCAGGCTGCGGAGCGAAAATTCTTTGTGATGTTGATGAATTAACGCAGTGTTCAAAATCTGAAATAATGAGAAATCTGAAGGGAAATGATATGGTTGCCGGCAACGAGGGTCGGTTCTCAAATGGAGTCGAGTTTCCATCTGTAGCTATTAGATTGTAA

Homology

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BLAST of CSPI05G18560 vs. Swiss-Prot
Match: CLPX2_ARATH (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.9e-73
Identity = 142/190 (74.74%), Postives = 165/190 (86.84%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTK+ILFICGGAF+ LEK +S+RQHD+SIGFGA VR +M T  L+  +VTSS+LE+++
Sbjct: 389 QMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQ 448

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DL+ YGLIPEFVGR PILVSLSAL+EDQLVQVLT+PK+ALGKQYKK+ RMN+V+L FT
Sbjct: 449 SEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFT 508

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE-----SNSIKAVLVDEEAVGSV 186
           E A R+IARKAM KNTGARGLRSILE+ILTEAMFEVP+     S SIKAVLVDEEAVGSV
Sbjct: 509 EGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSV 568

Query: 187 DASGCGAKIL 192
            + GCGAKIL
Sbjct: 569 GSPGCGAKIL 578

[Close]

BLAST of CSPI05G18560 vs. Swiss-Prot
Match: CLPX1_ARATH (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.6e-67
Identity = 139/229 (60.70%), Postives = 173/229 (75.55%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           Q+DTK+ILFICGGAFV +EK IS+R+HDSSIGFGAPVRA+MR G +T  +V S+++E VE
Sbjct: 348 QIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVE 407

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DLI YGLIPEFVGR P+LVSLSAL E+QL+QVLT+PKNALGKQYKKM +MN V+LHFT
Sbjct: 408 SSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFT 467

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----SNSIKAVLVDEEAVGSVD 186
           E+ALR+IARKA+ KNTGARGLR++LE+IL ++M+E+P+    S+ I+AV+VDEEAV    
Sbjct: 468 ESALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEG 527

Query: 187 ASGCGAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSV 232
             G GAKIL     L +   SE            G++G      E PSV
Sbjct: 528 RRGSGAKILRGKGALAR-YLSETNSKDSPQTTKEGSDGETEVEAEIPSV 575

[Close]

BLAST of CSPI05G18560 vs. Swiss-Prot
Match: CLPX3_ARATH (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.4e-65
Identity = 128/189 (67.72%), Postives = 155/189 (82.01%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           Q+DTK+ILFICGGAFV LEK I DR+ DSSIGFGAPVRA+M T  +T  ++TSS+LE+VE
Sbjct: 433 QIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVE 492

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DL  YGLIPEFVGR PILVSLSAL EDQL++VL +PKNALGKQYKK+  MN+V+LHFT
Sbjct: 493 SADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFT 552

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNS----IKAVLVDEEAVGSVD 186
           E AL +I+++AM KNTGARGLR++LE+ILTEAMFE+P+       I AV+VDEE+  S  
Sbjct: 553 EKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEA 612

Query: 187 ASGCGAKIL 192
           + GC AKIL
Sbjct: 613 SRGCTAKIL 621

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BLAST of CSPI05G18560 vs. Swiss-Prot
Match: CLPX_CHESB (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Chelativorans sp. (strain BNC1) GN=clpX PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.6e-46
Identity = 97/172 (56.40%), Postives = 123/172 (71.51%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           Q+DT +ILFICGGAF GLEK ISDR   +SIGFGA V +        ED     +L  VE
Sbjct: 238 QVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSP-------EDRRAGELLRQVE 297

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
             DL+ +GLIPEFVGR PIL +L  LDE+ LVQ+LT+PKNAL KQY+++  M +VEL F 
Sbjct: 298 PEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNALVKQYQRLFEMENVELTFH 357

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAV 179
           ENALR IARKA+++ TGARGLRSI+E IL + MFE+P    ++ V++ E+ V
Sbjct: 358 ENALRAIARKAIERKTGARGLRSIMEAILLDTMFELPALEGVQEVVISEDVV 402

[Close]

BLAST of CSPI05G18560 vs. Swiss-Prot
Match: CLPX_SINMW (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.0e-46
Identity = 94/172 (54.65%), Postives = 123/172 (71.51%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           Q+DT NILFICGGAF GL+K IS R   +SIGFGA VRA        ED     +L  +E
Sbjct: 239 QVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAP-------EDRRVGEVLRELE 298

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
             DL+ +GLIPEF+GR P+L +L  LDED L+Q+L++PKNAL KQY+++  M DVEL+F 
Sbjct: 299 PEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFH 358

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAV 179
           E+ALR IAR+A+ + TGARGLRSI+E IL + MFE+P    ++ V++ EE V
Sbjct: 359 EDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTLEGVREVVISEEVV 403

[Close]

BLAST of CSPI05G18560 vs. TrEMBL
Match: A0A0A0KR77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527380 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.0e-120
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 1


Query: 8   MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVES 67
           MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTED VTSSMLENVES
Sbjct: 1   MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVES 60

Query: 68  GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE 127
           GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE
Sbjct: 61  GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE 120

Query: 128 NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGCG 187
           NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGCG
Sbjct: 121 NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGCG 180

Query: 188 AKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSVAIRL 236
           AKILCDVDELTQCSKSEIMRNLK NDMVAGNEGR SNGVEFPSVAIRL
Sbjct: 181 AKILCDVDELTQCSKSEIMRNLKVNDMVAGNEGRLSNGVEFPSVAIRL 228

[Close]

BLAST of CSPI05G18560 vs. TrEMBL
Match: A0A067L0Y3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24892 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.0e-77
Identity = 160/218 (73.39%), Postives = 183/218 (83.94%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTK+ILFICGGAFV LEK IS+R+ D+SIGFGAPVRA+MRTG +T+ +VTSS+LE+VE
Sbjct: 368 QMDTKDILFICGGAFVNLEKTISERRQDASIGFGAPVRANMRTGGMTDAAVTSSLLESVE 427

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           SGDLI YGLIPEFVGR PILVSLSAL+EDQLVQVL +PKNALGKQYKKM  MN+V+LHFT
Sbjct: 428 SGDLIAYGLIPEFVGRFPILVSLSALNEDQLVQVLMEPKNALGKQYKKMFNMNNVKLHFT 487

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----SNSIKAVLVDEEAVGSVD 186
           EN+LR+IA+KAM KNTGARGLR+ILENILTEAM+EVPE    +N I AVLVDEEAVGSVD
Sbjct: 488 ENSLRLIAKKAMAKNTGARGLRAILENILTEAMYEVPENKTGTNYITAVLVDEEAVGSVD 547

Query: 187 ASGCGAKILCDVDELTQCSKSEI-MRNLKGNDMVAGNE 220
           A GCGAKIL   D    C+  E+ + N K N  VA  E
Sbjct: 548 APGCGAKILYG-DGAFGCNFHEMKLTNSKDNSRVAEGE 584

[Close]

BLAST of CSPI05G18560 vs. TrEMBL
Match: V4T010_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003616mg PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.4e-75
Identity = 151/222 (68.02%), Postives = 184/222 (82.88%), Query Frame = 1


Query: 8   MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVES 67
           +DTK+ILFICGGAFVGLEK IS+R+ DSSIGFGAPVRA+MRTG LT+  VTSS+LE+V+S
Sbjct: 367 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 426

Query: 68  GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE 127
           GDL+ YGLIPEF+GR PILVSLSAL+EDQLVQVL +PKNALG+QYKKM  MN+V+LHFT+
Sbjct: 427 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 486

Query: 128 NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----SNSIKAVLVDEEAVGSVDA 187
           +ALR+IA+KAM KNTGARGLR++LENILTEAMFE+PE    ++S+ AVLVD+EAVGSVDA
Sbjct: 487 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDA 546

Query: 188 SGCGAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNG 226
            GCGAKIL    EL       ++   K  D +   +G+F+ G
Sbjct: 547 PGCGAKILHGDGEL-----ERVLHETKSKDFM--GKGKFAQG 581

[Close]

BLAST of CSPI05G18560 vs. TrEMBL
Match: A0A067DGE8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g038067mg PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.1e-74
Identity = 146/194 (75.26%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 8   MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVES 67
           +DTK+ILFICGGAFVGLEK IS+R+ DSSIGFGAPVRA+MRTG LT+  VTSS+LE+V+S
Sbjct: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349

Query: 68  GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE 127
           GDL+ YGLIPEF+GR PILVSLSAL+EDQLVQVL +PKNALG+QYKKM  MN+V+LHFT+
Sbjct: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409

Query: 128 NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----SNSIKAVLVDEEAVGSVDA 187
           +ALR+IA+KAM KNTGARGLR++LENILTEAMFE+PE    ++S+ AVLVD+EAVGSVDA
Sbjct: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDA 469

Query: 188 SGCGAKILCDVDEL 198
            GCGAKIL    EL
Sbjct: 470 PGCGAKILHGDGEL 483

[Close]

BLAST of CSPI05G18560 vs. TrEMBL
Match: M5XPB3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007724mg PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73
Identity = 149/197 (75.63%), Postives = 170/197 (86.29%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDT+NILFICGGAFVGLEK IS+R  DSSIGFGAPVRA+MRT +LT+    S++LE+VE
Sbjct: 118 QMDTRNILFICGGAFVGLEKAISERLQDSSIGFGAPVRANMRTSELTDAISASALLESVE 177

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           +GDLI YGLIPEFVGR PILVSLS+L+EDQLVQVLT+PKNALGKQYKKM  MN+V+LHFT
Sbjct: 178 TGDLIAYGLIPEFVGRFPILVSLSSLNEDQLVQVLTEPKNALGKQYKKMFNMNNVKLHFT 237

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEV----PESNSIKAVLVDEEAVGSVD 186
           +NALR+IA+KAM KNTGARGLR+ILENILT+AMFEV    PE+N + AVLVDEEAVGSVD
Sbjct: 238 DNALRLIAKKAMAKNTGARGLRAILENILTDAMFEVPNIKPETNGVCAVLVDEEAVGSVD 297

Query: 187 ASGCGAKILCDVDELTQ 200
           A G GAKIL     L Q
Sbjct: 298 APGLGAKILSGDGALEQ 314

[Close]

BLAST of CSPI05G18560 vs. TAIR10
Match: AT5G49840.1 (AT5G49840.1 ATP-dependent Clp protease)

HSP 1 Score: 274.6 bits (701), Expect = 5.6e-74
Identity = 142/190 (74.74%), Postives = 165/190 (86.84%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTK+ILFICGGAF+ LEK +S+RQHD+SIGFGA VR +M T  L+  +VTSS+LE+++
Sbjct: 389 QMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQ 448

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DL+ YGLIPEFVGR PILVSLSAL+EDQLVQVLT+PK+ALGKQYKK+ RMN+V+L FT
Sbjct: 449 SEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFT 508

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE-----SNSIKAVLVDEEAVGSV 186
           E A R+IARKAM KNTGARGLRSILE+ILTEAMFEVP+     S SIKAVLVDEEAVGSV
Sbjct: 509 EGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSV 568

Query: 187 DASGCGAKIL 192
            + GCGAKIL
Sbjct: 569 GSPGCGAKIL 578

[Close]

BLAST of CSPI05G18560 vs. TAIR10
Match: AT5G53350.1 (AT5G53350.1 CLP protease regulatory subunit X)

HSP 1 Score: 257.3 bits (656), Expect = 9.2e-69
Identity = 139/229 (60.70%), Postives = 173/229 (75.55%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           Q+DTK+ILFICGGAFV +EK IS+R+HDSSIGFGAPVRA+MR G +T  +V S+++E VE
Sbjct: 348 QIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVE 407

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DLI YGLIPEFVGR P+LVSLSAL E+QL+QVLT+PKNALGKQYKKM +MN V+LHFT
Sbjct: 408 SSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFT 467

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----SNSIKAVLVDEEAVGSVD 186
           E+ALR+IARKA+ KNTGARGLR++LE+IL ++M+E+P+    S+ I+AV+VDEEAV    
Sbjct: 468 ESALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEG 527

Query: 187 ASGCGAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSV 232
             G GAKIL     L +   SE            G++G      E PSV
Sbjct: 528 RRGSGAKILRGKGALAR-YLSETNSKDSPQTTKEGSDGETEVEAEIPSV 575

[Close]

BLAST of CSPI05G18560 vs. TAIR10
Match: AT1G33360.1 (AT1G33360.1 ATP-dependent Clp protease)

HSP 1 Score: 249.6 bits (636), Expect = 1.9e-66
Identity = 128/189 (67.72%), Postives = 155/189 (82.01%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           Q+DTK+ILFICGGAFV LEK I DR+ DSSIGFGAPVRA+M T  +T  ++TSS+LE+VE
Sbjct: 433 QIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVE 492

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DL  YGLIPEFVGR PILVSLSAL EDQL++VL +PKNALGKQYKK+  MN+V+LHFT
Sbjct: 493 SADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFT 552

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNS----IKAVLVDEEAVGSVD 186
           E AL +I+++AM KNTGARGLR++LE+ILTEAMFE+P+       I AV+VDEE+  S  
Sbjct: 553 EKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEA 612

Query: 187 ASGCGAKIL 192
           + GC AKIL
Sbjct: 613 SRGCTAKIL 621

[Close]

BLAST of CSPI05G18560 vs. NCBI nr
Match: gi|449450117|ref|XP_004142810.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 7.5e-121
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTED VTSSMLENVE
Sbjct: 391 QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVE 450

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT
Sbjct: 451 SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 510

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC 186
           ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC
Sbjct: 511 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC 570

Query: 187 GAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSVAIRL 236
           GAKILCDVDELTQCSKSEIMRNLK NDMVAGNEGR SNGVEFPSVAIRL
Sbjct: 571 GAKILCDVDELTQCSKSEIMRNLKVNDMVAGNEGRLSNGVEFPSVAIRL 619

[Close]

BLAST of CSPI05G18560 vs. NCBI nr
Match: gi|778703780|ref|XP_011655426.1| (PREDICTED: mitochondrial clpX-like chaperone MCX1 isoform X3 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 7.5e-121
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTED VTSSMLENVE
Sbjct: 310 QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVE 369

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT
Sbjct: 370 SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 429

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC 186
           ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC
Sbjct: 430 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC 489

Query: 187 GAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSVAIRL 236
           GAKILCDVDELTQCSKSEIMRNLK NDMVAGNEGR SNGVEFPSVAIRL
Sbjct: 490 GAKILCDVDELTQCSKSEIMRNLKVNDMVAGNEGRLSNGVEFPSVAIRL 538

[Close]

BLAST of CSPI05G18560 vs. NCBI nr
Match: gi|700196222|gb|KGN51399.1| (hypothetical protein Csa_5G527380 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 2.8e-120
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 1


Query: 8   MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVES 67
           MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTED VTSSMLENVES
Sbjct: 1   MDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVES 60

Query: 68  GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE 127
           GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE
Sbjct: 61  GDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTE 120

Query: 128 NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGCG 187
           NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGCG
Sbjct: 121 NALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGCG 180

Query: 188 AKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSVAIRL 236
           AKILCDVDELTQCSKSEIMRNLK NDMVAGNEGR SNGVEFPSVAIRL
Sbjct: 181 AKILCDVDELTQCSKSEIMRNLKVNDMVAGNEGRLSNGVEFPSVAIRL 228

[Close]

BLAST of CSPI05G18560 vs. NCBI nr
Match: gi|659121297|ref|XP_008460588.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X3 [Cucumis melo])

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-114
Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRT +LTED VTSSMLENVE
Sbjct: 363 QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTARLTEDLVTSSMLENVE 422

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DL+TYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKM RMNDVELHFT
Sbjct: 423 SSDLVTYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMFRMNDVELHFT 482

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC 186
           ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVD E+VGSVDA GC
Sbjct: 483 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDGESVGSVDAPGC 542

Query: 187 GAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSVAI 234
           GAKILCDVDELT+CSKSEI+RNLKGNDMVA +EGRFSNGVEFPSVA+
Sbjct: 543 GAKILCDVDELTKCSKSEIIRNLKGNDMVADDEGRFSNGVEFPSVAM 589

[Close]

BLAST of CSPI05G18560 vs. NCBI nr
Match: gi|659121295|ref|XP_008460587.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-114
Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 1


Query: 7   QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDSVTSSMLENVE 66
           QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRT +LTED VTSSMLENVE
Sbjct: 385 QMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTARLTEDLVTSSMLENVE 444

Query: 67  SGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFT 126
           S DL+TYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKM RMNDVELHFT
Sbjct: 445 SSDLVTYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKMFRMNDVELHFT 504

Query: 127 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDEEAVGSVDASGC 186
           ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVD E+VGSVDA GC
Sbjct: 505 ENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPESNSIKAVLVDGESVGSVDAPGC 564

Query: 187 GAKILCDVDELTQCSKSEIMRNLKGNDMVAGNEGRFSNGVEFPSVAI 234
           GAKILCDVDELT+CSKSEI+RNLKGNDMVA +EGRFSNGVEFPSVA+
Sbjct: 565 GAKILCDVDELTKCSKSEIIRNLKGNDMVADDEGRFSNGVEFPSVAM 611

The following BLAST results are available for this feature:

BLAST of CSPI05G18560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLPX2_ARATH	9.9e-73	74.74	CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
CLPX1_ARATH	1.6e-67	60.70	CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
CLPX3_ARATH	3.4e-65	67.72	CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
CLPX_CHESB	4.6e-46	56.40	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Chelativorans sp. (strain...	[more]
CLPX_SINMW	6.0e-46	54.65	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Sinorhizobium medicae (st...	[more]

BLAST of CSPI05G18560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR77_CUCSA	2.0e-120	98.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527380 PE=4 SV=1	[more]
A0A067L0Y3_JATCU	6.0e-77	73.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24892 PE=4 SV=1	[more]
V4T010_9ROSI	7.4e-75	68.02	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003616mg PE=4 SV=1	[more]
A0A067DGE8_CITSI	8.1e-74	75.26	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g038067mg PE=4 S...	[more]
M5XPB3_PRUPE	1.1e-73	75.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007724mg PE=4 SV=1	[more]

BLAST of CSPI05G18560 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49840.1	5.6e-74	74.74	ATP-dependent Clp protease	[more]
AT5G53350.1	9.2e-69	60.70	CLP protease regulatory subunit X	[more]
AT1G33360.1	1.9e-66	67.72	ATP-dependent Clp protease	[more]

BLAST of CSPI05G18560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450117\|ref\|XP_004142810.1\|	7.5e-121	98.69	PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondri...	[more]
gi\|778703780\|ref\|XP_011655426.1\|	7.5e-121	98.69	PREDICTED: mitochondrial clpX-like chaperone MCX1 isoform X3 [Cucumis sativus]	[more]
gi\|700196222\|gb\|KGN51399.1\|	2.8e-120	98.68	hypothetical protein Csa_5G527380 [Cucumis sativus]	[more]
gi\|659121297\|ref\|XP_008460588.1\|	1.0e-114	93.83	PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondri...	[more]
gi\|659121295\|ref\|XP_008460587.1\|	1.0e-114	93.83	PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondri...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003959	ATPase_AAA_core
IPR019489	Clp_ATPase_C
IPR027417	P-loop_NTPase
IPR019489	Clp_ATPase_C
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G18560.2	CSPI05G18560.2	mRNA
CSPI05G18560.1	CSPI05G18560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019489	Clp ATPase, C-terminal	PFAM	PF10431	ClpB_D2-small	coord: 59..134 score: 1.7
IPR019489	Clp ATPase, C-terminal	SMART	SM01086	ClpB_D2_small_2	coord: 57..147 score: 8.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..128 score: 3.4
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 58..144 score: 4.5
None	No IPR available	PANTHER	PTHR11262	HSL AND CLP PROTEASE	coord: 7..156 score: 2.8
None	No IPR available	PANTHER	PTHR11262:SF9	ATP-DEPENDENT CLP PROTEASE	coord: 7..156 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G18560	Cla001882	Watermelon (97103) v1	cpiwmB447
CSPI05G18560	Csa5G527380	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G18560	MELO3C022924	Melon (DHL92) v3.5.1	cpimeB374
CSPI05G18560	ClCG11G000110	Watermelon (Charleston Gray)	cpiwcgB376
CSPI05G18560	Lsi11G001000	Bottle gourd (USVL1VR-Ls)	cpilsiB339
CSPI05G18560	MELO3C022924.2	Melon (DHL92) v3.6.1	cpimedB366
CSPI05G18560	CsaV3_5G027440	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G18560	Cla97C11G206470	Watermelon (97103) v2	cpiwmbB380
CSPI05G18560	BhiUN159G30	Wax gourd	cpiwgoB495
CSPI05G18560	Cucsa.011600	Cucumber (Gy14) v1	cgycpiB296
CSPI05G18560	CmaCh04G018960	Cucurbita maxima (Rimu)	cmacpiB766
CSPI05G18560	CmoCh04G019980	Cucurbita moschata (Rifu)	cmocpiB764
CSPI05G18560	Cp4.1LG01g17130	Cucurbita pepo (Zucchini)	cpecpiB458
CSPI05G18560	CsGy5G018200	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G18560	Carg26174	Silver-seed gourd	carcpiB0312

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G18560	Wild cucumber (PI 183967)	cpicpiB032
CSPI05G18560	Cucumber (Gy14) v1	cgycpiB317
CSPI05G18560	Cucumber (Chinese Long) v2	cpicuB217
CSPI05G18560	Watermelon (Charleston Gray)	cpiwcgB396
CSPI05G18560	Watermelon (Charleston Gray)	cpiwcgB418
CSPI05G18560	Bottle gourd (USVL1VR-Ls)	cpilsiB388
CSPI05G18560	Cucumber (Gy14) v2	cgybcpiB033