CSPI05G12830 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G12830
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaC09g20880D protein
LocationChr5 : 12222365 .. 12224289 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATTTTCTGTCATATTTTTCCATTCTCTTTCTCTCACTCACATTTCTTCTTTGTTAAGTTGTTGTTGTTGTCTAGTAGAGAGGAAATAAAATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGTAACAACTCTCTTTAAATACCTCTCTTTCATTTATTATTTCTTTCTTTGAAATATTACTTAATGGGGTTGGTATACAACATACGTGGTAGACAGTTTTAACTGTTTGCAACAATCTTAGATCGTTATAGAATGATCTCATTGAATATATATATATATATATATAGAAATGAGTTTTCTTTTTTCCTTTTTCTTCTTGTCCACTCATGACGTGATAAGAGATATGTTTTAATTCACCTGTTAGTTGATGTATATGTGTGCATGGATTGCTGTTTATGTTTAAAACATTGATCTGGTTTTAGAACTTTTAACAACTTGCATTTATTTATTTTCTATTCATAAAATACTTCGTATTGTAATTGTGAACTTCTCTAACTCATCTAATTAGATTTTTTTTTTTTTTTGAAAAGGTAATTAGATGTTAATTTTGTTTGTTAAGAAGTTGCATGCAACATAATTGGATTATTTAGTCTTCTTGGTAATCAATTTCATTTAACTTATTTCTTCTCAATTTCAATTCAAAACAACAAAAACAAATTTTTAAAAACTACATTATTAAACTTTCAGAATTAGATTAGTTTTTCAAAATATTTGTAAAAATTTAATAACAAAAGCAAGAAATTTGGAGATGGAGTAAGTGTATATGGGTTTAATCTTCAAAATTGAAAACCCTAAAAATAAAATCGTGCGGTTATTTTTTCTTTCCAATTTAGGAATTCAAATACGTAAAACTATACAAAAGAAATAAAAGAAAAATTAAAGCTTAGTGAATTATATAACTACATGATTGAATGTTTAGAAATCAAATTTATAAAACCCTAGTTGTTAAGGCTCACTTGGATAACAGATTCATTTTTAGTTTTCTTTAAAACTTTTGTTTGTCTAATCACTATTAGAATAATATGATGTTCACCTTTCTTAAAAGTAAGATTTGAATTCCTATTCAAATTCCAAAAGTAAAACAATGTTTAAGAAACGGAAAGAAACAGTTTTAAAATGTTGATTTTTTTTTGTTAATTTATCAAAAATTCAAATGCTTTAGAATTTCAGTCCCAAACAAAATTCAAATATTATTGGCTCAGTCTTTGTCCCAATCTGCTTACGTTTTTTCTTTCTTTTATTGGGAAATGATTGTGATACGTTTGAAATTGAGGACAGGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGATCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAGTTGGATAAATTTGAGTCATAGCTTCACAGTCGTCACACACAAAGTTAAAGCAGCACACAAGTTTATATGGTTCAAAGTATGGGGGCGTGGAAGATTGTTGAGATGCAAATATTTTTTGTTCAATATAATGTTTAGTTTTAAATATATAATTAAGTGTTGAGATATATTGGTGTGAATTAGAAGAAATATGTTGTTTAAAATCCTGTTTTTATATATTAAATTATATAAATTTTGTATTTTGGTAAAGTTAAAGTTATGGCCCCTTGTGGACTCCAATTGTGTTAAAGTAATGTATGGGGTATGGTATGAAAGAAAAAGTAAATTTGGTTAGAGGGAAGTGTTGAATGGGA

mRNA sequence

ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGATCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAGTTGGATAAATTTGAGTCATAG

Coding sequence (CDS)

ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGATCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAGTTGGATAAATTTGAGTCATAG
Homology
[Close]
BLAST of CSPI05G12830 vs. TrEMBL
Match: A0A0A0KPE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G258200 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.3e-60
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 116
           VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115

[Close]
BLAST of CSPI05G12830 vs. TrEMBL
Match: A0A061EG67_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_011218 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-17
Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 11  MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVK---- 70
           +EFWP++HP+EP DED PV CPMP S+S+ D G  +  +   ES RKR+EV+ ++K    
Sbjct: 50  IEFWPVEHPMEPQDEDRPVKCPMPASSSIND-GIGNEERLAAESSRKRSEVTEKLKKGTP 109

Query: 71  --VQAEARPVRKRHHRTLSRPDQL---MVGMSPRPITP--NFTIFQMLQQLDKFES 116
              +   R VRKRHH TL+R D +   +V M P P  P  N TIFQMLQ+ DKF S
Sbjct: 110 VGTEPAVRAVRKRHH-TLTRDDHVIKPLVRMPPLPPLPTQNLTIFQMLQEFDKFNS 163

[Close]
BLAST of CSPI05G12830 vs. TrEMBL
Match: A0A061E9H9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_011218 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-17
Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 11  MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVK---- 70
           +EFWP++HP+EP DED PV CPMP S+S+ D G  +  +   ES RKR+EV+ ++K    
Sbjct: 83  IEFWPVEHPMEPQDEDRPVKCPMPASSSIND-GIGNEERLAAESSRKRSEVTEKLKKGTP 142

Query: 71  --VQAEARPVRKRHHRTLSRPDQL---MVGMSPRPITP--NFTIFQMLQQLDKFES 116
              +   R VRKRHH TL+R D +   +V M P P  P  N TIFQMLQ+ DKF S
Sbjct: 143 VGTEPAVRAVRKRHH-TLTRDDHVIKPLVRMPPLPPLPTQNLTIFQMLQEFDKFNS 196

[Close]
BLAST of CSPI05G12830 vs. TrEMBL
Match: M5XJ48_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024210mg PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-16
Identity = 59/126 (46.83%), Postives = 71/126 (56.35%), Query Frame = 1 

Query: 12  EFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVS--------- 71
           +FWP++HPLEP DED PV CPMP+S+ + D G          + RKRTEVS         
Sbjct: 49  QFWPVEHPLEPPDEDRPVKCPMPDSSVINDGGRQEKRSSESSAMRKRTEVSSAAAATYSK 108

Query: 72  --REVKVQAEARP------VRKRHHRTLSRPDQL---MVGMSPRPITP--NFTIFQMLQQ 116
              +  V A A P      VRKRHH TL+R D +   +  M P P  P  + TIFQMLQQ
Sbjct: 109 PRTDQMVVAVAEPPPAVRAVRKRHHNTLTRGDHMISPLRRMPPIPSLPTQSITIFQMLQQ 168

[Close]
BLAST of CSPI05G12830 vs. TrEMBL
Match: V4UAZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016789mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 1 

Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLL-DEGTMHNGKRTPESWRKRT 60
           + V   E+ ++EFWP++HPLEP DED PV CPMP+++S++ ++  M + +R  +S+RKRT
Sbjct: 69  VNVMEHELLELEFWPVEHPLEPQDEDRPVKCPMPSASSVINNDSRMEDQERIADSFRKRT 128

Query: 61  EV-----SRE---VKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITP-----NFTIFQM 116
           EV     +RE   V ++   R VRKRHH +L+  D     +  +P  P       T+ +M
Sbjct: 129 EVPPDFSNREGIDVNIEPPIRAVRKRHHHSLTSDDHNAQSLMRKPPHPPLQSQKITVLEM 188

[Close]
BLAST of CSPI05G12830 vs. TAIR10
Match: AT2G01913.1 (AT2G01913.1 unknown protein)

HSP 1 Score: 54.3 bits (129), Expect = 5.8e-08
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 1 

Query: 11  MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVKV--- 70
           +EF P++HP+EP++ED PV CP+P S+SL+ +      +++   W K    S E  V   
Sbjct: 29  VEFCPVEHPIEPEEEDRPVKCPVPISSSLIHKPK----EKSKPGWVKHRASSYETPVYPP 88

Query: 71  -QAEARPVRKRHHR----------TLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 116
            +   R VRKRH+           T S  D             N T +++LQQ+ +FES
Sbjct: 89  PRHHVRNVRKRHNSFDVEGNNNFFTRSHDDDETTSR-----RSNVTFYRVLQQVQEFES 138

[Close]
BLAST of CSPI05G12830 vs. NCBI nr
Match: gi|449445308|ref|XP_004140415.1| (PREDICTED: uncharacterized protein LOC101204044 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.2e-60
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 116
           VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115

[Close]
BLAST of CSPI05G12830 vs. NCBI nr
Match: gi|659114032|ref|XP_008456876.1| (PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 1 

Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 116
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]
BLAST of CSPI05G12830 vs. NCBI nr
Match: gi|694451486|ref|XP_009350905.1| (PREDICTED: uncharacterized protein LOC103942441 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-17
Identity = 55/126 (43.65%), Postives = 69/126 (54.76%), Query Frame = 1 

Query: 12  EFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSR-------- 71
           EFWP++HPLEP DED PV CPMP+S+ + + G          S RKRTE S         
Sbjct: 55  EFWPVEHPLEPPDEDRPVKCPMPDSSVINEGGRKEKRFSETSSMRKRTEASSAAAAAYSN 114

Query: 72  ---------EVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNF-----TIFQMLQQ 116
                     V+    ARPVRKRHH TL+R D ++  +   P  P+F     T+FQMLQQ
Sbjct: 115 QGLTDQTVVAVETPPPARPVRKRHHHTLTRGDHMISPLRRMPPLPSFPTQSITVFQMLQQ 174

[Close]
BLAST of CSPI05G12830 vs. NCBI nr
Match: gi|590697445|ref|XP_007045441.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 95.5 bits (236), Expect = 6.5e-17
Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 11  MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVK---- 70
           +EFWP++HP+EP DED PV CPMP S+S+ D G  +  +   ES RKR+EV+ ++K    
Sbjct: 83  IEFWPVEHPMEPQDEDRPVKCPMPASSSIND-GIGNEERLAAESSRKRSEVTEKLKKGTP 142

Query: 71  --VQAEARPVRKRHHRTLSRPDQL---MVGMSPRPITP--NFTIFQMLQQLDKFES 116
              +   R VRKRHH TL+R D +   +V M P P  P  N TIFQMLQ+ DKF S
Sbjct: 143 VGTEPAVRAVRKRHH-TLTRDDHVIKPLVRMPPLPPLPTQNLTIFQMLQEFDKFNS 196

[Close]
BLAST of CSPI05G12830 vs. NCBI nr
Match: gi|590697449|ref|XP_007045442.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 95.5 bits (236), Expect = 6.5e-17
Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 11  MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVK---- 70
           +EFWP++HP+EP DED PV CPMP S+S+ D G  +  +   ES RKR+EV+ ++K    
Sbjct: 50  IEFWPVEHPMEPQDEDRPVKCPMPASSSIND-GIGNEERLAAESSRKRSEVTEKLKKGTP 109

Query: 71  --VQAEARPVRKRHHRTLSRPDQL---MVGMSPRPITP--NFTIFQMLQQLDKFES 116
              +   R VRKRHH TL+R D +   +V M P P  P  N TIFQMLQ+ DKF S
Sbjct: 110 VGTEPAVRAVRKRHH-TLTRDDHVIKPLVRMPPLPPLPTQNLTIFQMLQEFDKFNS 163

The following BLAST results are available for this feature:
BLAST of CSPI05G12830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G12830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPE8_CUCSA4.3e-6099.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G258200 PE=4 SV=1[more]
A0A061EG67_THECC4.5e-1749.14Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_011218 PE=4 SV=1[more]
A0A061E9H9_THECC4.5e-1749.14Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_011218 PE=4 SV=1[more]
M5XJ48_PRUPE1.3e-1646.83Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024210mg PE=4 SV=1[more]
V4UAZ0_9ROSI1.7e-1641.09Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016789mg PE=4 SV=1[more]
BLAST of CSPI05G12830 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01913.15.8e-0832.77 unknown protein[more]
BLAST of CSPI05G12830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445308|ref|XP_004140415.1|6.2e-6099.13PREDICTED: uncharacterized protein LOC101204044 [Cucumis sativus][more]
gi|659114032|ref|XP_008456876.1|2.9e-5793.91PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo][more]
gi|694451486|ref|XP_009350905.1|3.8e-1743.65PREDICTED: uncharacterized protein LOC103942441 isoform X2 [Pyrus x bretschneide... [more]
gi|590697445|ref|XP_007045441.1|6.5e-1749.14Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|590697449|ref|XP_007045442.1|6.5e-1749.14Uncharacterized protein isoform 2 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G12830.1CSPI05G12830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34196FAMILY NOT NAMEDcoord: 11..115
score: 3.6
NoneNo IPR availablePANTHERPTHR34196:SF1SUBFAMILY NOT NAMEDcoord: 11..115
score: 3.6