CSPI05G10730 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G10730
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTIR-NBS-LRR-AAA+ATPase class resistance protein
LocationChr5 : 9270296 .. 9270726 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAATTACGTCAAAACTCGTGAATCTATCACTTCATACTATTAAAGAAAAATCGAATAAGGTTGAAATGCATGACTTAATACAACAAATGGATCTGACAATTGCTCTTTCAAACACTTTCAAATCTGATGAAGAAAAAAGATTGTTGGTTGAAGAGGATGGTATGGATGTCCTAAATGGCAACAACGTAACAACTATCTGCACACAAACTTTGAATATGTATATTAATTATAAGAACAACTTTATTATTTTTGAATGACTTGAAATGTTTGTCTGTTTTTTTTTTATATATATAATTTGTAGGAAGCAAGAGTAGTTAAAGCCACAAAACTAAATTTTCCTCAACCAATGGAGCTGGAAATTGATTCAAAAGCTATTGAAAGAGTGAAGAACCTGGTAGTGCTCAAAGTTCGGAATGGCCACTTCTTCTAA

mRNA sequence

GGAATTACGTCAAAACTCGTGAATCTATCACTTCATACTATTAAAGAAAAATCGAATAAGGTTGAAATGCATGACTTAATACAACAAATGGATCTGACAATTGCTCTTTCAAACACTTTCAAATCTGATGAAGAAAAAAGATTGTTGGTTGAAGAGGATGGTATGGATGTCCTAAATGGCAACAACGAAGCAAGAGTAGTTAAAGCCACAAAACTAAATTTTCCTCAACCAATGGAGCTGGAAATTGATTCAAAAGCTATTGAAAGAGTGAAGAACCTGGTAGTGCTCAAAGTTCGGAATGGCCACTTCTTCTAA

Coding sequence (CDS)

GGAATTACGTCAAAACTCGTGAATCTATCACTTCATACTATTAAAGAAAAATCGAATAAGGTTGAAATGCATGACTTAATACAACAAATGGATCTGACAATTGCTCTTTCAAACACTTTCAAATCTGATGAAGAAAAAAGATTGTTGGTTGAAGAGGATGGTATGGATGTCCTAAATGGCAACAACGAAGCAAGAGTAGTTAAAGCCACAAAACTAAATTTTCCTCAACCAATGGAGCTGGAAATTGATTCAAAAGCTATTGAAAGAGTGAAGAACCTGGTAGTGCTCAAAGTTCGGAATGGCCACTTCTTCTAA
Homology
[Close]
BLAST of CSPI05G10730 vs. TrEMBL
Match: A0A0A0KP48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G207930 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.3e-33
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 30  MDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNNEARVVKATKLNFPQPMELEIDSKAIER 89
           MD+TIALSNTFKSDEEKRLLVEEDGMDVLNGNNEARVVKATKLNFPQPMELEIDSKAIER
Sbjct: 1   MDMTIALSNTFKSDEEKRLLVEEDGMDVLNGNNEARVVKATKLNFPQPMELEIDSKAIER 60

Query: 90  VKNLVVLKVRNGHFF 105
           VKNLVVLKVRNGHFF
Sbjct: 61  VKNLVVLKVRNGHFF 75

[Close]
BLAST of CSPI05G10730 vs. TrEMBL
Match: A0A0A0LJ96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G059700 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-24
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 3   TSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNN 62
           T+KL+NLSL TI+   N+++MHDLIQQM  +I LS TF S + KRLL+++D MDVLNGN 
Sbjct: 475 TTKLMNLSLLTIE--FNRIKMHDLIQQMGRSIHLSETFTSHKRKRLLIKDDAMDVLNGNK 534

Query: 63  EARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           EAR VK  KL+FP+P +L+IDS+A E+VKNLVVL VRN
Sbjct: 535 EARAVKVIKLDFPRPTQLDIDSRAFEKVKNLVVLDVRN 570

[Close]
BLAST of CSPI05G10730 vs. TrEMBL
Match: D9I8I5_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-23
Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 1 

Query: 1   GITSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNG 60
           GIT KL+NLSL TI  + N+VEMH++IQQM  TI LS T KS + KRLL+++D MDVLNG
Sbjct: 436 GIT-KLMNLSLLTIG-RFNRVEMHNIIQQMGRTIHLSETSKSHKRKRLLIKDDAMDVLNG 495

Query: 61  NNEARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           N EAR VK  KLNFP+P +L+IDS+A ++VKNLVVL+V N
Sbjct: 496 NKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNLVVLEVGN 533

[Close]
BLAST of CSPI05G10730 vs. TrEMBL
Match: A0A0A0LGB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021540 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-23
Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 1 

Query: 1   GITSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNG 60
           GIT KL+NLSL TI  + N+VEMH++IQQM  TI LS T KS + KRLL+++D MDVLNG
Sbjct: 436 GIT-KLMNLSLLTIG-RFNRVEMHNIIQQMGRTIHLSETSKSHKRKRLLIKDDAMDVLNG 495

Query: 61  NNEARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           N EAR VK  KLNFP+P +L+IDS+A ++VKNLVVL+V N
Sbjct: 496 NKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNLVVLEVGN 533

[Close]
BLAST of CSPI05G10730 vs. TrEMBL
Match: E7CHD4_CUCSA (Putative NBS-LRR protein OS=Cucumis sativus PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-23
Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 1 

Query: 1   GITSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNG 60
           GIT KL+NLSL TI  + N+VEMH++IQQM  TI LS T KS + KRLL+++D MDVLNG
Sbjct: 254 GIT-KLMNLSLLTIG-RFNRVEMHNIIQQMGRTIHLSETSKSHKRKRLLIKDDAMDVLNG 313

Query: 61  NNEARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           N EAR VK  KLNFP+P +L+IDS+A ++VKNLVVL+V N
Sbjct: 314 NKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNLVVLEVGN 351

[Close]
BLAST of CSPI05G10730 vs. NCBI nr
Match: gi|700195487|gb|KGN50664.1| (hypothetical protein Csa_5G207930 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 7.6e-33
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 30  MDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNNEARVVKATKLNFPQPMELEIDSKAIER 89
           MD+TIALSNTFKSDEEKRLLVEEDGMDVLNGNNEARVVKATKLNFPQPMELEIDSKAIER
Sbjct: 1   MDMTIALSNTFKSDEEKRLLVEEDGMDVLNGNNEARVVKATKLNFPQPMELEIDSKAIER 60

Query: 90  VKNLVVLKVRNGHFF 105
           VKNLVVLKVRNGHFF
Sbjct: 61  VKNLVVLKVRNGHFF 75

[Close]
BLAST of CSPI05G10730 vs. NCBI nr
Match: gi|659070463|ref|XP_008455228.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 3   TSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNN 62
           T+KL+NLSL TI E SN++EMHDLIQQM  TI LS T KS + KRLL+++D MDVLNGN 
Sbjct: 531 TTKLMNLSLLTIDEHSNRIEMHDLIQQMGRTIHLSETSKSHKRKRLLIKDDVMDVLNGNK 590

Query: 63  EARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           EAR VK  KLNFP+P ELEIDS+A E+VK LVVL +RN
Sbjct: 591 EARAVKVIKLNFPKPTELEIDSRAFEKVKKLVVLDIRN 628

[Close]
BLAST of CSPI05G10730 vs. NCBI nr
Match: gi|659070467|ref|XP_008455243.1| (PREDICTED: TMV resistance protein N-like isoform X3 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 3   TSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNN 62
           T+KL+NLSL TI E SN++EMHDLIQQM  TI LS T KS + KRLL+++D MDVLNGN 
Sbjct: 476 TTKLMNLSLLTIDEHSNRIEMHDLIQQMGRTIHLSETSKSHKRKRLLIKDDVMDVLNGNK 535

Query: 63  EARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           EAR VK  KLNFP+P ELEIDS+A E+VK LVVL +RN
Sbjct: 536 EARAVKVIKLNFPKPTELEIDSRAFEKVKKLVVLDIRN 573

[Close]
BLAST of CSPI05G10730 vs. NCBI nr
Match: gi|659070469|ref|XP_008455251.1| (PREDICTED: TMV resistance protein N-like isoform X4 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 3   TSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNN 62
           T+KL+NLSL TI E SN++EMHDLIQQM  TI LS T KS + KRLL+++D MDVLNGN 
Sbjct: 269 TTKLMNLSLLTIDEHSNRIEMHDLIQQMGRTIHLSETSKSHKRKRLLIKDDVMDVLNGNK 328

Query: 63  EARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           EAR VK  KLNFP+P ELEIDS+A E+VK LVVL +RN
Sbjct: 329 EARAVKVIKLNFPKPTELEIDSRAFEKVKKLVVLDIRN 366

[Close]
BLAST of CSPI05G10730 vs. NCBI nr
Match: gi|659070465|ref|XP_008455236.1| (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 3   TSKLVNLSLHTIKEKSNKVEMHDLIQQMDLTIALSNTFKSDEEKRLLVEEDGMDVLNGNN 62
           T+KL+NLSL TI E SN++EMHDLIQQM  TI LS T KS + KRLL+++D MDVLNGN 
Sbjct: 521 TTKLMNLSLLTIDEHSNRIEMHDLIQQMGRTIHLSETSKSHKRKRLLIKDDVMDVLNGNK 580

Query: 63  EARVVKATKLNFPQPMELEIDSKAIERVKNLVVLKVRN 101
           EAR VK  KLNFP+P ELEIDS+A E+VK LVVL +RN
Sbjct: 581 EARAVKVIKLNFPKPTELEIDSRAFEKVKKLVVLDIRN 618

The following BLAST results are available for this feature:
BLAST of CSPI05G10730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G10730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP48_CUCSA5.3e-3398.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G207930 PE=4 SV=1[more]
A0A0A0LJ96_CUCSA3.4e-2463.27Uncharacterized protein OS=Cucumis sativus GN=Csa_2G059700 PE=4 SV=1[more]
D9I8I5_CUCSA1.7e-2364.00Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1[more]
A0A0A0LGB6_CUCSA1.7e-2364.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021540 PE=4 SV=1[more]
E7CHD4_CUCSA1.7e-2364.00Putative NBS-LRR protein OS=Cucumis sativus PE=3 SV=1[more]
BLAST of CSPI05G10730 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G10730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195487|gb|KGN50664.1|7.6e-3398.67hypothetical protein Csa_5G207930 [Cucumis sativus][more]
gi|659070463|ref|XP_008455228.1|2.8e-2768.37PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
gi|659070467|ref|XP_008455243.1|2.8e-2768.37PREDICTED: TMV resistance protein N-like isoform X3 [Cucumis melo][more]
gi|659070469|ref|XP_008455251.1|2.8e-2768.37PREDICTED: TMV resistance protein N-like isoform X4 [Cucumis melo][more]
gi|659070465|ref|XP_008455236.1|2.8e-2768.37PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0043531 ADP binding
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G10730.1CSPI05G10730.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G10730Csa5G207930Cucumber (Chinese Long) v2cpicuB240
CSPI05G10730CsaV3_5G010200Cucumber (Chinese Long) v3cpicucB285
CSPI05G10730CsGy5G008060Cucumber (Gy14) v2cgybcpiB226
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G10730Watermelon (97103) v2cpiwmbB367
CSPI05G10730Watermelon (97103) v2cpiwmbB387
CSPI05G10730Watermelon (97103) v2cpiwmbB412
CSPI05G10730Wax gourdcpiwgoB437
CSPI05G10730Wax gourdcpiwgoB497
CSPI05G10730Wax gourdcpiwgoB517
CSPI05G10730Wild cucumber (PI 183967)cpicpiB120
CSPI05G10730Wild cucumber (PI 183967)cpicpiB184
CSPI05G10730Cucumber (Gy14) v1cgycpiB204
CSPI05G10730Cucumber (Gy14) v1cgycpiB280
CSPI05G10730Cucumber (Gy14) v1cgycpiB545
CSPI05G10730Cucurbita maxima (Rimu)cmacpiB229
CSPI05G10730Cucurbita maxima (Rimu)cmacpiB556
CSPI05G10730Cucurbita maxima (Rimu)cmacpiB621
CSPI05G10730Cucurbita maxima (Rimu)cmacpiB756
CSPI05G10730Cucurbita maxima (Rimu)cmacpiB757
CSPI05G10730Cucurbita moschata (Rifu)cmocpiB746
CSPI05G10730Cucurbita moschata (Rifu)cmocpiB747
CSPI05G10730Cucurbita moschata (Rifu)cmocpiB546
CSPI05G10730Cucurbita moschata (Rifu)cmocpiB614
CSPI05G10730Cucumber (Chinese Long) v2cpicuB230
CSPI05G10730Cucumber (Chinese Long) v2cpicuB258
CSPI05G10730Melon (DHL92) v3.5.1cpimeB361
CSPI05G10730Melon (DHL92) v3.5.1cpimeB394
CSPI05G10730Watermelon (Charleston Gray)cpiwcgB361
CSPI05G10730Watermelon (Charleston Gray)cpiwcgB400
CSPI05G10730Watermelon (Charleston Gray)cpiwcgB420
CSPI05G10730Watermelon (97103) v1cpiwmB374
CSPI05G10730Watermelon (97103) v1cpiwmB393
CSPI05G10730Watermelon (97103) v1cpiwmB395
CSPI05G10730Watermelon (97103) v1cpiwmB442
CSPI05G10730Cucurbita pepo (Zucchini)cpecpiB437
CSPI05G10730Cucurbita pepo (Zucchini)cpecpiB438
CSPI05G10730Cucurbita pepo (Zucchini)cpecpiB737
CSPI05G10730Bottle gourd (USVL1VR-Ls)cpilsiB335
CSPI05G10730Bottle gourd (USVL1VR-Ls)cpilsiB363
CSPI05G10730Bottle gourd (USVL1VR-Ls)cpilsiB366
CSPI05G10730Melon (DHL92) v3.6.1cpimedB352
CSPI05G10730Melon (DHL92) v3.6.1cpimedB374
CSPI05G10730Melon (DHL92) v3.6.1cpimedB390
CSPI05G10730Cucumber (Gy14) v2cgybcpiB135
CSPI05G10730Silver-seed gourdcarcpiB0102
CSPI05G10730Silver-seed gourdcarcpiB0368
CSPI05G10730Silver-seed gourdcarcpiB0706
CSPI05G10730Silver-seed gourdcarcpiB1038
CSPI05G10730Cucumber (Chinese Long) v3cpicucB273
CSPI05G10730Cucumber (Chinese Long) v3cpicucB308