CSPI05G09470 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G09470
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RNA-binding protein 34
Location	Chr5 : 7947529 .. 7950393 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCCAATAGGTTTTAGTAGGAAACTTAGGAACCCTCCAAGTTCGAATTTCAGGCGTTTATGAATCCACCATTGTGAAGATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGGTGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGGTAGTTCATTTAATCTATTGCCTCAGCTGTTATATATCTCAGTAGCTTCACATTTCCTTTTGAACTCTTAGATTGAATGACATTGATGAGTTATGATTAATTGCTTATGAAAATTTCTCTGAGGGACTATGCTTCTGATTGTTTTAGTCTGCTAGTGTTAGACATTGATCTGGAAATGATTTGCCTTTGATGATTTACTGTCAATGCTTGAGGAAGGAGAAATTGCATTTCGAATATGAATTGCTGCTTTCTTAGGGGAATGGCTTGAGTTTGATTAAGCGTTAAAACTCTTTCTCGTGTTAGTTCCCTTGTAGATATTGTATGCACAATAGTGTCTATGGATCTGATACTCTAATAGTGTTTATTATATTGATCTGAGGAATTTTTAATGGTATTGCCCTAGTCCAAGCTGTGTCATCTAGATTGGTAGATGCTTTAGCGCTGCCCTTCTCCTTTTGATTGATTAGAATGTGAAAGTGGACTTTTCTTTTTGCTGATATTTATTAGTGCTCTTCAATATTCTACAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGGTATGATAATCTGATTAATGTGTAATTTCATTCCTCTTAGTAGGGAAGATCAAACAACTTTTGAATGGTTCATGATTGGGTGATTTGTGCCAGATCTTAGTCTTACTGAATGTGAGTTGGTGCAACTGTTGGCACTCAAATTGCTTGCAAGTGTGCAACTTCCGTTTTAAAGTTAATTGAGGTTAGAAATGAGATTTAAAAGGCATTATGACACTAGGATTTCCAAAGTTTAGCCAAATATTGTGTCATATATATAACATTACTAAAGAATATTCACTTGAACATACAATTAGCTTTCTTATTCTAAAAAACATATAGTATGTCATTTGAATTGATTTCTGTGTAATTAGCATGTCAGAGTCAGACTGTCAAGTTCTAATTGAGAGCTTGGGACTTGTACTTCGCTTTGTCCTGAACTGATAGTGGCCAGATCTCCTCCCCCTTTTTGCCTAGTGTACATCTACTGGCTAATATCTACGATTGAATTAACTGAGCAATTATAAGGACGGAGACCGGCTCTTAAGTCAGCTGTCTTAGTAACCCATCGGCAATCTCTTTTGTAACCTCCTATAGTTGTTATAGGCTTTCTGGGGTTTTCCTTGACTTTGTTTATCAGTGAAATGTTTATTTATCATAAAATCAATTTTGAATTTCCGGAGGCCAGATTCCTTTGGTTTTATTGCTACCTTACCACTGTTTCCCTTTCACAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGTGAGAATATGAACAATTTGATCTCTTGTCGTCATTATACTTTCTTACTTAATTCCACCACCTTATTACAAATTATTCTTATATAGGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACTCGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGTAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGAGGTACAATGAATGCCTTCTCTTTGTTTCTTGTTGGCAGCAAAATTGAACTGTTGAGAATTTTCTTTTGCACTGTATGCTAATTGTAATCTGATGTTTTGAATTTCACTTATAGAAAGGTTAATATAAATTTAATCTGGCTAGGAGAAAAATTATTTTT

mRNA sequence

ATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGGTGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACTCGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGTAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGA

Coding sequence (CDS)

ATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGGTGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACTCGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGTAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGA

Homology

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BLAST of CSPI05G09470 vs. Swiss-Prot
Match: ROA1_DROME (Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster GN=Hrb98DE PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.7e-15
Identity = 52/191 (27.23%), Postives = 93/191 (48.69%), Query Frame = 1


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFK-----TEAAAK 250
           K+++GG+ Y +T++++ + FE  G I ++  MK P + + RG   +++       EA   
Sbjct: 32  KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91

Query: 251 RALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF 310
           R    DG         V+P +   +      SP       ++++G L  D  E  ++  F
Sbjct: 92  RPHKIDGR-------VVEPKRAVPRQDID--SPNAGATVKKLFVGALKDDHDEQSIRDYF 151

Query: 311 VNC-KIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKG 370
            +   I  I   +DKETG+ RG+A V+F D   +   +   Q  ++G+ V ++ A+PK+ 
Sbjct: 152 QHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQN 211

Query: 371 TENGGGGAVAG 376
            + GGGG   G
Sbjct: 212 DQQGGGGGRGG 213

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BLAST of CSPI05G09470 vs. Swiss-Prot
Match: RB87F_DROME (Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster GN=Hrb87F PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-12
Identity = 53/218 (24.31%), Postives = 100/218 (45.87%), Query Frame = 1


Query: 160 KQGDVSGNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTEDDICSFFESCGTITE 219
           +Q D +GN          Y+ G E  E     K+++GG+ Y +T+D + + FE  G I +
Sbjct: 3   EQNDSNGN----------YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVD 62

Query: 220 IDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSP 279
           +  MK P++ + RG   +++        A       + G    V+P +   +      SP
Sbjct: 63  VVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDG--RTVEPKRAVPRQEID--SP 122

Query: 280 GLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-KIASIRFGMDKETGEFRGYAHVDFSDGIS 339
                  ++++G L  D  E+ L++ F +  +I S+    DK+TG+ RG+A ++F D   
Sbjct: 123 NAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDP 182

Query: 340 LKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAVAG 376
           +   +      I  + + ++ A+ K+  +  GGG   G
Sbjct: 183 VDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRG 206

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BLAST of CSPI05G09470 vs. Swiss-Prot
Match: ROA3_HUMAN (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-12
Identity = 46/187 (24.60%), Postives = 91/187 (48.66%), Query Frame = 1


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALAC 250
           K+++GG+ + +T+D +   FE  GT+T+   M+ P++ + RG   +++        A+  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 251 DGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-K 310
               + G    V+P +    +R     PG      +I++G +  D  E +L+  F    K
Sbjct: 96  RPHKVDGRV--VEPKRAV--SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGK 155

Query: 311 IASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKK-----G 370
           I +I    D+++G+ RG+A V F D  ++   +      I+G   +++ A+ K+     G
Sbjct: 156 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAG 215

Query: 371 TENGGGG 372
           ++ G GG
Sbjct: 216 SQRGRGG 218

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BLAST of CSPI05G09470 vs. Swiss-Prot
Match: ROA3_RAT (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-12
Identity = 46/187 (24.60%), Postives = 91/187 (48.66%), Query Frame = 1


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALAC 250
           K+++GG+ + +T+D +   FE  GT+T+   M+ P++ + RG   +++        A+  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 251 DGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-K 310
               + G    V+P +    +R     PG      +I++G +  D  E +L+  F    K
Sbjct: 96  RPHKVDGRV--VEPKRAV--SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGK 155

Query: 311 IASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKK-----G 370
           I +I    D+++G+ RG+A V F D  ++   +      I+G   +++ A+ K+     G
Sbjct: 156 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAG 215

Query: 371 TENGGGG 372
           ++ G GG
Sbjct: 216 SQRGRGG 218

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BLAST of CSPI05G09470 vs. Swiss-Prot
Match: ROA3_MOUSE (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-12
Identity = 46/187 (24.60%), Postives = 91/187 (48.66%), Query Frame = 1


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALAC 250
           K+++GG+ + +T+D +   FE  GT+T+   M+ P++ + RG   +++        A+  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 251 DGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-K 310
               + G    V+P +    +R     PG      +I++G +  D  E +L+  F    K
Sbjct: 96  RPHKVDGRV--VEPKRAV--SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGK 155

Query: 311 IASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKK-----G 370
           I +I    D+++G+ RG+A V F D  ++   +      I+G   +++ A+ K+     G
Sbjct: 156 IETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAG 215

Query: 371 TENGGGG 372
           ++ G GG
Sbjct: 216 SQRGRGG 218

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BLAST of CSPI05G09470 vs. TrEMBL
Match: A0A0A0KLT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180870 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 3.7e-173
Identity = 350/482 (72.61%), Postives = 379/482 (78.63%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNF--------------------GVSGERDTE 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNF                      SG     
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SPRKSLKELLGTASGNGPRLSKREKRRESL---------------VLTGSDGNKKEKKED 120
           S R+  +E L     +G +  K+E   + L                + G + + ++ K+ 
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 ENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKLKNKKKQQQKKKMK------------ 180
           +N+   ++K+K  +    K    G EE  ++ +K K K+K+++K+K K            
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEK 180

Query: 181 -KKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240
            K+K  +KE   E+EKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV
Sbjct: 181 EKEKEKEKEKEKEKEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240

Query: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300
           YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG
Sbjct: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300

Query: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360
           ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS
Sbjct: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360

Query: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420
           IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA
Sbjct: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420

Query: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 435
           VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV
Sbjct: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 480

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BLAST of CSPI05G09470 vs. TrEMBL
Match: M5XPI9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024384mg PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110
Identity = 255/465 (54.84%), Postives = 313/465 (67.31%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSN++LKQKLRE LA+SL+ SVA  D     S   D  S  +SLK LL + +   PRL
Sbjct: 1   MVLSNRRLKQKLRETLAQSLVESVAKTDPQTDGSENPDPNSEPQSLKVLLDSVTQK-PRL 60

Query: 61  SKREKRRESLVLTGSD--------GNKKEKKEDENQG------LGE------KKRKRNEG 120
           SKREKRR+ L L GS+        GN +E K +E++G      LG+      KK+KR   
Sbjct: 61  SKREKRRKLLALRGSEAVSGSGTGGNFEENKGEEDKGEVESEDLGDEKKEEKKKKKRKRD 120

Query: 121 VKEKNAVGGLEEDNEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEK 180
            +EKN V   EE+    ++ K  KK+ +KKK KK K  KKE   EEEK   K+ E   E+
Sbjct: 121 EEEKNGVLSSEENEVVKEEAKKPKKKNKKKKKKKNKKRKKEATNEEEK---KDGELGSEE 180

Query: 181 QGDVSGNDVKGQVEETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEID 240
           Q           V+ET+ N   + + ++ TKVYVGGIPYYSTEDDI S+FESCGTITE+D
Sbjct: 181 QS----------VKETNNNSDRQTNGDVPTKVYVGGIPYYSTEDDIRSYFESCGTITEVD 240

Query: 241 CMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGL 300
           C++FP+SGKFRGIAI+S KTEAAAKRALA DGA+MG LFLK+QPYK TR N+ +DF+P +
Sbjct: 241 CLRFPDSGKFRGIAIISLKTEAAAKRALALDGAEMGELFLKIQPYKATRANKVSDFAPQI 300

Query: 301 VEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKT 360
           VEGYNRIY+GNLSWD+TEDDLKKLF +CKI+SI FGMDKETGEFRGYAHV+FSD +SL  
Sbjct: 301 VEGYNRIYVGNLSWDITEDDLKKLFSDCKISSIHFGMDKETGEFRGYAHVNFSDSLSLTL 360

Query: 361 ALKLDQKIIHGRPVKIRCAVPKK--GTENGGGGAVAGAETHPEM---------NPEPIPE 420
           ALKLDQK++ GRPVKI CAVP K  GT +      +   T   +         N  P+  
Sbjct: 361 ALKLDQKVVCGRPVKISCAVPLKRAGTPSNSAPTNSTTTTSTNLIPVAATTNTNSIPVAT 420

Query: 421 TKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 435
           T  A    +SA+ GKI+RRTCYECGEKGH+SS CP KQ AD+  S
Sbjct: 421 TTGADNGGLSAIGGKIKRRTCYECGEKGHISSACPKKQSADNNAS 451

[Close]

BLAST of CSPI05G09470 vs. TrEMBL
Match: D7TLY3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g00430 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.3e-106
Identity = 246/448 (54.91%), Postives = 298/448 (66.52%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGR-DTNFGVSGERDTESPRKSLKELLGTASGNGPR 60
           MVLSNKKLKQKLR  LAESL+ SVAG  D     S   + +   +SL+ LLG+A+   PR
Sbjct: 1   MVLSNKKLKQKLRAALAESLVVSVAGTTDPTTTDSTSTNPDPNPQSLENLLGSAT-QIPR 60

Query: 61  LSKREKRRESLVLTGSD----GNKKEKKE------------DENQGLGEKKRKRNEGVKE 120
           LSKREKRR++L L G +     N+ E+KE             EN+   +KKRKR+  V +
Sbjct: 61  LSKREKRRKTLSLQGPELAGTSNQSEEKEANTEALTDDGNNTENKDKKKKKRKRDGEVDD 120

Query: 121 KNAVGGLEEDNEKAKKLKNKKKQQQKKKMKKKKSNKK-ENNGEEEKEKEKEKEKEKEKQG 180
                GLEE+  K KK KNKKK+++KKK K +  NK  EN G E                
Sbjct: 121 GEV--GLEENKNKLKKKKNKKKKKKKKKQKSEGQNKDVENEGGE---------------- 180

Query: 181 DVSGNDVKGQVEETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCM 240
                  KG V+ET     S+ + + + KVYVGGIPYYSTEDDI S+F+SCGTITE+DCM
Sbjct: 181 -------KGVVKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCM 240

Query: 241 KFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVE 300
            FPESGKFRGIAI+SFKTEAAAKRALA DGADMGGLFLK+QPYK TR N+++DF+P +VE
Sbjct: 241 MFPESGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAPEMVE 300

Query: 301 GYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTAL 360
           GYNRIY+GNL WD+TED+++K F  C ++SIRFGMDKET EFRGYAHVDFSD  SL  AL
Sbjct: 301 GYNRIYVGNLPWDITEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMAL 360

Query: 361 KLDQKIIHGRPVKIRCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVS 420
           KLDQ+I+ GRP KIRCAVPKKG ++                P P  E  E    + S  S
Sbjct: 361 KLDQEIVCGRPAKIRCAVPKKGAKD-------------YSTPAPSSEKAENDGGLTSG-S 408

Query: 421 GKIRRRTCYECGEKGHLSSNCPNKQLAD 431
           GK++RRTCYECGE+GH+SS CP KQ  D
Sbjct: 421 GKMKRRTCYECGERGHISSACPKKQAPD 408

[Close]

BLAST of CSPI05G09470 vs. TrEMBL
Match: W9RQS5_9ROSA (28 kDa ribonucleoprotein OS=Morus notabilis GN=L484_025397 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.3e-104
Identity = 235/438 (53.65%), Postives = 292/438 (66.67%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLR +LA+SL  SVA  D N        TES  +SLK LL +++   PRL
Sbjct: 1   MVLSNKKLKQKLRAELAKSLSESVAKADLN--------TESQTQSLKLLLDSSTQR-PRL 60

Query: 61  SKREKRRESLVLTGSDG------NKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDN 120
           SKREKRRE+  L G +        +++KKE  ++G   KKRKR    +E N V  + E+N
Sbjct: 61  SKREKRRETFSLRGLEPVNGDNLGEEDKKESGSEG---KKRKRK---REGNDVVLVSEEN 120

Query: 121 EKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVE 180
              KK K KKK                      K+K  +K+K K ++G   GN+ +  VE
Sbjct: 121 GVVKKSKTKKK----------------------KKKNSKKKKAKNEEGKELGNEEQMVVE 180

Query: 181 ETHYN-IGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGI 240
               N + S+ + N+ TKVYVGGIP+YSTEDDI S+FE CGTITE+DCM FPESGKFRGI
Sbjct: 181 PNEKNDVNSQANGNVTTKVYVGGIPFYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGI 240

Query: 241 AILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLS 300
           +I+SFKTEAAAKRALA DG+DMGGLFL +QPY   + N+ +DF+P +VEGYNRIY+GNL+
Sbjct: 241 SIISFKTEAAAKRALALDGSDMGGLFLTIQPYNANQINKKSDFAPEIVEGYNRIYVGNLA 300

Query: 301 WDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRP 360
           WD+TED LK  F +CK++SIRFGMDKETGEFRGYAHVDFSD +SL  ALKLDQK++ GRP
Sbjct: 301 WDITEDKLKNFFSDCKVSSIRFGMDKETGEFRGYAHVDFSDSLSLTMALKLDQKVVCGRP 360

Query: 361 VKIRCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYEC 420
            +IRCAVP K  +          ET P         T   AVS   A +GK++RR+CYEC
Sbjct: 361 ARIRCAVPLKKMQTNTRSVPRTTETAPTTT----ETTDTNAVSTSVASTGKMKRRSCYEC 397

Query: 421 GEKGHLSSNCPNKQLADS 432
           GEKGH+SS+CP K+ A S
Sbjct: 421 GEKGHISSDCPKKKTASS 397

[Close]

BLAST of CSPI05G09470 vs. TrEMBL
Match: A0A068TVG2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029804001 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 6.2e-104
Identity = 237/437 (54.23%), Postives = 298/437 (68.19%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDT---NFGVSGERDTESPRKSLKELLGTASGNG 60
           MVLSNKKLKQ LR   AE L +S A   +   NF  + E      +KSL  LL +AS   
Sbjct: 1   MVLSNKKLKQTLRAAKAELLAASEAQNQSINKNFQ-NPEYPDLGTQKSLNSLLESASQK- 60

Query: 61  PRLSKREKRRESLVLTGSDGNKKEKKEDENQG-LGEKKRKRNEGVKEKNAVGGLEEDNEK 120
           PRLSKREKRR+       +  K  K ED   G + E ++++N+  +++N     E +N +
Sbjct: 61  PRLSKREKRRQKAPSLQENEEKLNKDEDAGSGGMAEYEKRKNKRKRDENQ----ELENGE 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEET 180
            KK+K    +  KKK KKKK  KKE  G+E +E  + +E    + G +   D+  +++  
Sbjct: 121 VKKVK----KLSKKKKKKKKKKKKERKGKEVEENGEVQESLGTEAGVIDDQDLTQRLDYD 180

Query: 181 HYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240
           +    SE   +  TKVYVGGIPYYS+EDDI S+FE CGTITEIDCMKFPESGKFRGIAI+
Sbjct: 181 N----SEGSLDAGTKVYVGGIPYYSSEDDIRSYFEGCGTITEIDCMKFPESGKFRGIAII 240

Query: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDV 300
           SFKTEAAA+RALA DG+DMGGLFLK+QPYK  R  + ++F+P +VEGYNRIY+GNLSWD+
Sbjct: 241 SFKTEAAARRALALDGSDMGGLFLKIQPYKSARVTKTSNFAPKIVEGYNRIYVGNLSWDI 300

Query: 301 TEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKI 360
           TEDDL+K F  C I+SIRFG DKETG+FRGYAHVDFSD +SL TALKLDQKI+ GRP++I
Sbjct: 301 TEDDLRKFFSVCNISSIRFGEDKETGDFRGYAHVDFSDSLSLNTALKLDQKIVCGRPIRI 360

Query: 361 RCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEK 420
            CAVPKKG+E+                 +P+PE  +A     +AVSGKIRRRTCYECGE+
Sbjct: 361 SCAVPKKGSED---------------KTKPLPENNQAVGDGATAVSGKIRRRTCYECGER 408

Query: 421 GHLSSNCPNKQLADSVT 434
           GHLSS+CP KQ AD  +
Sbjct: 421 GHLSSSCPKKQTADQTS 408

[Close]

BLAST of CSPI05G09470 vs. TAIR10
Match: AT3G55340.1 (AT3G55340.1 phragmoplastin interacting protein 1)

HSP 1 Score: 273.1 bits (697), Expect = 3.0e-73
Identity = 200/454 (44.05%), Postives = 260/454 (57.27%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQ++R+ LAESL  SV+            +T    +SLK LL ++S + PRL
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVS------------ETNPQSQSLKLLLDSSS-HKPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEK-------KRKRNEGVKEKNAVGGLEED 120
           SKREKRR        D   +E  E  N G  EK       KRKR++ V+    V  LE D
Sbjct: 61  SKREKRRNCETFAREDDEIREN-EVGNGGSSEKTDTKIKKKRKRDDAVE----VDELEGD 120

Query: 121 NEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQV 180
            E  K+ +  +K++ KKK KK+K NK     EE   +EK K +E E   D          
Sbjct: 121 -EGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVEEKVKVEEIEVNTD---------- 180

Query: 181 EETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGI 240
                    E D  +  K+YVGGIPY STED+I S+F SCG I ++DC   PE G F GI
Sbjct: 181 -------NKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGI 240

Query: 241 AILSFKTEAAAKRALACDGADMGGLFLKVQPYKGT------RKNRAADFSPGLVEGYNRI 300
           A ++F TE  AKRALA D A MG  +L +Q Y  T      R+  ++ F+P +V+GYNR+
Sbjct: 241 AFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRV 300

Query: 301 YIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQK 360
           YIGNL+WD TE D++KLF +C I S+R G +KETGEF+GYAHVDF D +S+  ALKLDQ+
Sbjct: 301 YIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQ 360

Query: 361 IIHGRPVKIRCAVPKKGT------ENGGGGAVAGAETHPEMNPEPI----PETKEAAVSV 420
           +I GRPVKI CA+  +        E    G+    +T+   +P P      E  +     
Sbjct: 361 VICGRPVKICCALKDRPATDHTPGETNNAGSYNMEDTYAAADPVPALAGRSEVDDGNYFA 418

Query: 421 VSAVSGKIRRRTCYECGEKGHLSSNCPNK-QLAD 431
            +  S K++RR CYECGEKGHLS+ CP K Q AD
Sbjct: 421 TTVSSSKVKRRVCYECGEKGHLSTACPIKLQKAD 418

[Close]

BLAST of CSPI05G09470 vs. TAIR10
Match: AT4G24770.1 (AT4G24770.1 31-kDa RNA binding protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-14
Identity = 69/234 (29.49%), Postives = 116/234 (49.57%), Query Frame = 1


Query: 141 ENNGEEEKEKEKEKEKEKEKQGDVS-GNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIP 200
           EN+ E +   E ++ +    +GDVS G++ +G V E   +  +EF E +   K++VG + 
Sbjct: 99  ENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLA 158

Query: 201 YYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALA-CDGADMGG 260
           Y      +   FE  GT+   + +   E+ + RG   ++  +   A+ A+   +  D+ G
Sbjct: 159 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 218

Query: 261 LFLKVQPY--KGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIR 320
             L V     +G+R  RA    P + E   R+Y+GNL WDV    L++LF  + K+   R
Sbjct: 219 RLLTVNKAAPRGSRPERA----PRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEAR 278

Query: 321 FGMDKETGEFRGYAHVDFSDGISLKTALK-LDQKIIHGRPVKIRCA---VPKKG 365
              D+ETG  RG+  V  SD   L  A+  LD + + GR +++  A    P++G
Sbjct: 279 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328

[Close]

BLAST of CSPI05G09470 vs. TAIR10
Match: AT5G50250.1 (AT5G50250.1 chloroplast RNA-binding protein 31B)

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-13
Identity = 59/211 (27.96%), Postives = 99/211 (46.92%), Query Frame = 1


Query: 155 EKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLA-TKVYVGGIPYYSTEDDICSFFESC 214
           E+E+ + G + G  V    E      G  F E     K++VG +PY      +   FE  
Sbjct: 78  EEEEGEDGSIGGTSVTVD-ESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQA 137

Query: 215 GTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALA-CDGADMGGLFLKVQPY--KGTRK 274
           GT+   + +   ++ + RG   ++  T   A++A+   +  ++ G  L V     +G+R 
Sbjct: 138 GTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRP 197

Query: 275 NRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIRFGMDKETGEFRGYAH 334
            R     P + +   RIY+GNL WDV    L++LF  + K+   R   D+ETG  RG+  
Sbjct: 198 ER----QPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGF 257

Query: 335 VDFSDGISLKTAL-KLDQKIIHGRPVKIRCA 360
           V  S+   +  A+  LD + + GR +K+  A
Sbjct: 258 VQMSNENEVNVAIAALDGQNLEGRAIKVNVA 283

[Close]

BLAST of CSPI05G09470 vs. TAIR10
Match: AT2G16940.2 (AT2G16940.2 Splicing factor, CC1-like)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-11
Identity = 54/209 (25.84%), Postives = 98/209 (46.89%), Query Frame = 1


Query: 192 VYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACD 251
           V+   I   +TE D+  FF   G + ++  +    S + RGI  + F    +   A+A  
Sbjct: 233 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALS 292

Query: 252 GADMGGLFLKVQPYKGTRK----NRAADFSPGLVEGYN----RIYIGNLSWDVTEDDLKK 311
           G  + G  + V+P +  +       AA  + G++  Y+    R+Y+GNL  +++EDDL+K
Sbjct: 293 GQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRK 352

Query: 312 LFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKI-IHGRPVKI-----R 371
           +F +     +      ETG  +G+  V F+     + AL L+ ++ I GR +K+     +
Sbjct: 353 VFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQ 412

Query: 372 CAVPKKG--------TENGGGGAVAGAET 379
             VP+ G         ++ GGG    A++
Sbjct: 413 TEVPEAGQTQTTGDLDDDDGGGLSLNAQS 441

[Close]

BLAST of CSPI05G09470 vs. TAIR10
Match: AT2G37220.1 (AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-11
Identity = 51/191 (26.70%), Postives = 92/191 (48.17%), Query Frame = 1


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT----EAAAKR 250
           K++VG +P+      +   FES G +  ++ +    +G+ RG   ++  +    EAAA++
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 251 ALACDGADMGGLFLKVQ----PYKG----TRKNRAADFSPGLVEGY-----------NRI 310
               +G ++ G  L+V     P K     +R  R++  S G   GY           NR+
Sbjct: 152 F---NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSG--SGYGGGGGSGAGSGNRV 211

Query: 311 YIGNLSWDVTEDDLKKLF-VNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALK-LD 357
           Y+GNLSW V +  L+ LF    K+   R   D+++G  +G+  V +     ++ A+K LD
Sbjct: 212 YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLD 271

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: gi|778700952|ref|XP_011654941.1| (PREDICTED: protein gar2 isoform X1 [Cucumis sativus])

HSP 1 Score: 810.1 bits (2091), Expect = 1.9e-231
Identity = 431/434 (99.31%), Postives = 431/434 (99.31%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKL 120
           SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAV GLEEDNEKAKKL
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI 180
           KNKKKQQQKKKMKKKKSNKKENNGEEEKEK  EKEKEKEKQGDVSGNDVKGQVEETHYNI
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEK--EKEKEKEKQGDVSGNDVKGQVEETHYNI 180

Query: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240
           GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT
Sbjct: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240

Query: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300
           EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD
Sbjct: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300

Query: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360
           LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV
Sbjct: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360

Query: 361 PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS 420
           PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS
Sbjct: 361 PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS 420

Query: 421 SNCPNKQLADSVTS 435
           SNCPNKQLADSVTS
Sbjct: 421 SNCPNKQLADSVTS 432

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: gi|778700956|ref|XP_011654942.1| (PREDICTED: protein gar2 isoform X2 [Cucumis sativus])

HSP 1 Score: 798.1 bits (2060), Expect = 7.6e-228
Identity = 423/434 (97.47%), Postives = 423/434 (97.47%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKL 120
           SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAV GLEEDNEKAKKL
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI 180
           KNKKKQQQKKKMKKKKSNKKENNGEE          EKEKQGDVSGNDVKGQVEETHYNI
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEE----------EKEKQGDVSGNDVKGQVEETHYNI 180

Query: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240
           GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT
Sbjct: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240

Query: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300
           EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD
Sbjct: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300

Query: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360
           LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV
Sbjct: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360

Query: 361 PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS 420
           PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS
Sbjct: 361 PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS 420

Query: 421 SNCPNKQLADSVTS 435
           SNCPNKQLADSVTS
Sbjct: 421 SNCPNKQLADSVTS 424

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: gi|659123390|ref|XP_008461639.1| (PREDICTED: protein gar2 [Cucumis melo])

HSP 1 Score: 725.3 bits (1871), Expect = 6.2e-206
Identity = 396/442 (89.59%), Postives = 407/442 (92.08%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLG----EKKRKRNEGVKEKNAVGGLEEDNEK 120
           SKREKRRESL+LTGSDGNK EKKE+ENQGLG    EKKRKRNEGVKEKNAV GLE+D EK
Sbjct: 61  SKREKRRESLILTGSDGNKNEKKEEENQGLGEMKREKKRKRNEGVKEKNAVDGLEKDKEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEET 180
           AKKLKNKKKQQQKK  KKKKSNKKENNGEE          EKEKQGDVSGNDVKGQVEET
Sbjct: 121 AKKLKNKKKQQQKK--KKKKSNKKENNGEE----------EKEKQGDVSGNDVKGQVEET 180

Query: 181 HYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240
           HYNIGSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL
Sbjct: 181 HYNIGSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240

Query: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDV 300
           SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDV
Sbjct: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDV 300

Query: 301 TEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKI 360
           TEDDLKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKI
Sbjct: 301 TEDDLKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKI 360

Query: 361 RCAVPKKGTENGGGG--AVAGAETHPEMNPEPIPETKE--AAVSVVSAVSGKIRRRTCYE 420
           RCAVPKKGTE GGGG  AVA  E HPEMN EP+PETKE  AA SVV++VSGKIRRRTCYE
Sbjct: 361 RCAVPKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYE 420

Query: 421 CGEKGHLSSNCPNKQLADSVTS 435
           CGEKGHLSSNCPNKQ ADSVTS
Sbjct: 421 CGEKGHLSSNCPNKQPADSVTS 430

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: gi|700195351|gb|KGN50528.1| (hypothetical protein Csa_5G180870 [Cucumis sativus])

HSP 1 Score: 615.9 bits (1587), Expect = 5.3e-173
Identity = 350/482 (72.61%), Postives = 379/482 (78.63%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNF--------------------GVSGERDTE 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNF                      SG     
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SPRKSLKELLGTASGNGPRLSKREKRRESL---------------VLTGSDGNKKEKKED 120
           S R+  +E L     +G +  K+E   + L                + G + + ++ K+ 
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 ENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKLKNKKKQQQKKKMK------------ 180
           +N+   ++K+K  +    K    G EE  ++ +K K K+K+++K+K K            
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEK 180

Query: 181 -KKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240
            K+K  +KE   E+EKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV
Sbjct: 181 EKEKEKEKEKEKEKEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240

Query: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300
           YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG
Sbjct: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300

Query: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360
           ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS
Sbjct: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360

Query: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420
           IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA
Sbjct: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420

Query: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 435
           VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV
Sbjct: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 480

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: gi|596037191|ref|XP_007219756.1| (hypothetical protein PRUPE_ppa024384mg [Prunus persica])

HSP 1 Score: 408.3 bits (1048), Expect = 1.7e-110
Identity = 255/465 (54.84%), Postives = 313/465 (67.31%), Query Frame = 1


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSN++LKQKLRE LA+SL+ SVA  D     S   D  S  +SLK LL + +   PRL
Sbjct: 1   MVLSNRRLKQKLRETLAQSLVESVAKTDPQTDGSENPDPNSEPQSLKVLLDSVTQK-PRL 60

Query: 61  SKREKRRESLVLTGSD--------GNKKEKKEDENQG------LGE------KKRKRNEG 120
           SKREKRR+ L L GS+        GN +E K +E++G      LG+      KK+KR   
Sbjct: 61  SKREKRRKLLALRGSEAVSGSGTGGNFEENKGEEDKGEVESEDLGDEKKEEKKKKKRKRD 120

Query: 121 VKEKNAVGGLEEDNEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEK 180
            +EKN V   EE+    ++ K  KK+ +KKK KK K  KKE   EEEK   K+ E   E+
Sbjct: 121 EEEKNGVLSSEENEVVKEEAKKPKKKNKKKKKKKNKKRKKEATNEEEK---KDGELGSEE 180

Query: 181 QGDVSGNDVKGQVEETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEID 240
           Q           V+ET+ N   + + ++ TKVYVGGIPYYSTEDDI S+FESCGTITE+D
Sbjct: 181 QS----------VKETNNNSDRQTNGDVPTKVYVGGIPYYSTEDDIRSYFESCGTITEVD 240

Query: 241 CMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGL 300
           C++FP+SGKFRGIAI+S KTEAAAKRALA DGA+MG LFLK+QPYK TR N+ +DF+P +
Sbjct: 241 CLRFPDSGKFRGIAIISLKTEAAAKRALALDGAEMGELFLKIQPYKATRANKVSDFAPQI 300

Query: 301 VEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKT 360
           VEGYNRIY+GNLSWD+TEDDLKKLF +CKI+SI FGMDKETGEFRGYAHV+FSD +SL  
Sbjct: 301 VEGYNRIYVGNLSWDITEDDLKKLFSDCKISSIHFGMDKETGEFRGYAHVNFSDSLSLTL 360

Query: 361 ALKLDQKIIHGRPVKIRCAVPKK--GTENGGGGAVAGAETHPEM---------NPEPIPE 420
           ALKLDQK++ GRPVKI CAVP K  GT +      +   T   +         N  P+  
Sbjct: 361 ALKLDQKVVCGRPVKISCAVPLKRAGTPSNSAPTNSTTTTSTNLIPVAATTNTNSIPVAT 420

Query: 421 TKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 435
           T  A    +SA+ GKI+RRTCYECGEKGH+SS CP KQ AD+  S
Sbjct: 421 TTGADNGGLSAIGGKIKRRTCYECGEKGHISSACPKKQSADNNAS 451

The following BLAST results are available for this feature:

BLAST of CSPI05G09470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ROA1_DROME	2.7e-15	27.23	Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster GN=Hrb98DE...	[more]
RB87F_DROME	1.6e-12	24.31	Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster GN=Hrb87F...	[more]
ROA3_HUMAN	6.2e-12	24.60	Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2	[more]
ROA3_RAT	6.2e-12	24.60	Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus GN=Hnrnpa3 PE=1 ...	[more]
ROA3_MOUSE	6.2e-12	24.60	Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus GN=Hnrnpa3 PE=1 SV=1	[more]

BLAST of CSPI05G09470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLT8_CUCSA	3.7e-173	72.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180870 PE=4 SV=1	[more]
M5XPI9_PRUPE	1.2e-110	54.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024384mg PE=4 SV=1	[more]
D7TLY3_VITVI	1.3e-106	54.91	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g00430 PE=4 SV=...	[more]
W9RQS5_9ROSA	1.3e-104	53.65	28 kDa ribonucleoprotein OS=Morus notabilis GN=L484_025397 PE=4 SV=1	[more]
A0A068TVG2_COFCA	6.2e-104	54.23	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029804001 PE=4 SV=1	[more]

BLAST of CSPI05G09470 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55340.1	3.0e-73	44.05	phragmoplastin interacting protein 1	[more]
AT4G24770.1	1.8e-14	29.49	31-kDa RNA binding protein	[more]
AT5G50250.1	2.7e-13	27.96	chloroplast RNA-binding protein 31B	[more]
AT2G16940.2	1.5e-11	25.84	Splicing factor, CC1-like	[more]
AT2G37220.1	2.5e-11	26.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of CSPI05G09470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778700952\|ref\|XP_011654941.1\|	1.9e-231	99.31	PREDICTED: protein gar2 isoform X1 [Cucumis sativus]	[more]
gi\|778700956\|ref\|XP_011654942.1\|	7.6e-228	97.47	PREDICTED: protein gar2 isoform X2 [Cucumis sativus]	[more]
gi\|659123390\|ref\|XP_008461639.1\|	6.2e-206	89.59	PREDICTED: protein gar2 [Cucumis melo]	[more]
gi\|700195351\|gb\|KGN50528.1\|	5.3e-173	72.61	hypothetical protein Csa_5G180870 [Cucumis sativus]	[more]
gi\|596037191\|ref\|XP_007219756.1\|	1.7e-110	54.84	hypothetical protein PRUPE_ppa024384mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR001878	Znf_CCHC
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G09470.1	CSPI05G09470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 192..258 score: 4.4E-12coord: 287..355 score: 4.6
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 191..263 score: 2.8E-18coord: 286..357 score: 5.0
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 285..361 score: 14.692coord: 190..267 score: 13
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 404..426 score: 2.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 408..425 score: 6.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 409..425 score: 1.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 410..425 score: 10
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 404..426 score: 1.3
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 283..371 score: 6.1E-21coord: 125..157 score: 2.1E-19coord: 189..270 score: 2.1
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 282..371 score: 6.99E-23coord: 185..273 score: 1.63
None	No IPR available	unknown	Coil	Coil	coord: 107..161 scor
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 187..386 score: 2.7E-85coord: 142..160 score: 2.7
None	No IPR available	PANTHER	PTHR24012:SF386	PHRAGMOPLASTIN INTERACTING PROTEIN 1	coord: 187..386 score: 2.7E-85coord: 142..160 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G09470	Cla004029	Watermelon (97103) v1	cpiwmB399
CSPI05G09470	Csa5G180870	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G09470	MELO3C023836	Melon (DHL92) v3.5.1	cpimeB360
CSPI05G09470	ClCG07G003140	Watermelon (Charleston Gray)	cpiwcgB420
CSPI05G09470	Lsi04G008670	Bottle gourd (USVL1VR-Ls)	cpilsiB366
CSPI05G09470	MELO3C023836.2	Melon (DHL92) v3.6.1	cpimedB350
CSPI05G09470	CsaV3_5G006870	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G09470	Cla97C07G131450	Watermelon (97103) v2	cpiwmbB412
CSPI05G09470	Bhi07G000796	Wax gourd	cpiwgoB518
CSPI05G09470	Cucsa.165490	Cucumber (Gy14) v1	cgycpiB258
CSPI05G09470	CmaCh04G002300	Cucurbita maxima (Rimu)	cmacpiB757
CSPI05G09470	CmaCh04G012050	Cucurbita maxima (Rimu)	cmacpiB756
CSPI05G09470	CmoCh04G012770	Cucurbita moschata (Rifu)	cmocpiB746
CSPI05G09470	CmoCh04G002350	Cucurbita moschata (Rifu)	cmocpiB747
CSPI05G09470	Cp4.1LG01g04550	Cucurbita pepo (Zucchini)	cpecpiB438
CSPI05G09470	Cp4.1LG01g10580	Cucurbita pepo (Zucchini)	cpecpiB437
CSPI05G09470	CsGy5G006790	Cucumber (Gy14) v2	cgybcpiB226
CSPI05G09470	Carg23792	Silver-seed gourd	carcpiB0900
CSPI05G09470	Carg00283	Silver-seed gourd	carcpiB0706

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G09470	Bottle gourd (USVL1VR-Ls)	cpilsiB346
CSPI05G09470	Bottle gourd (USVL1VR-Ls)	cpilsiB356
CSPI05G09470	Melon (DHL92) v3.6.1	cpimedB347
CSPI05G09470	Melon (DHL92) v3.6.1	cpimedB406
CSPI05G09470	Cucumber (Gy14) v2	cgybcpiB182
CSPI05G09470	Cucumber (Gy14) v2	cgybcpiB230
CSPI05G09470	Silver-seed gourd	carcpiB0300
CSPI05G09470	Cucumber (Chinese Long) v3	cpicucB278
CSPI05G09470	Cucumber (Chinese Long) v3	cpicucB292
CSPI05G09470	Watermelon (97103) v2	cpiwmbB393
CSPI05G09470	Watermelon (97103) v2	cpiwmbB432
CSPI05G09470	Wax gourd	cpiwgoB498
CSPI05G09470	Wild cucumber (PI 183967)	cpicpiB153
CSPI05G09470	Wild cucumber (PI 183967)	cpicpiB175
CSPI05G09470	Cucumber (Gy14) v1	cgycpiB057
CSPI05G09470	Cucurbita maxima (Rimu)	cmacpiB312
CSPI05G09470	Cucurbita maxima (Rimu)	cmacpiB685
CSPI05G09470	Cucurbita moschata (Rifu)	cmocpiB304
CSPI05G09470	Cucurbita moschata (Rifu)	cmocpiB677
CSPI05G09470	Cucumber (Chinese Long) v2	cpicuB245
CSPI05G09470	Cucumber (Chinese Long) v2	cpicuB235
CSPI05G09470	Melon (DHL92) v3.5.1	cpimeB357
CSPI05G09470	Melon (DHL92) v3.5.1	cpimeB408
CSPI05G09470	Watermelon (Charleston Gray)	cpiwcgB359
CSPI05G09470	Watermelon (Charleston Gray)	cpiwcgB404
CSPI05G09470	Watermelon (97103) v1	cpiwmB373
CSPI05G09470	Watermelon (97103) v1	cpiwmB435