CSPI05G06230 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G06230
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 5623427 .. 5623618 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGAGAGTGAAGAGTGTTTTGCGGAGAAATGTGGGGCGCCGCTGTATGAGATCCGAACCGGAATTAAAGGTTCTCGTTTATTTCGAATATGGCGCCAAGTTCGCCCCCTTGCTGCTTCATCAACGGTCAAAAAGGGGTGGCGTAAGATTATATGCAGCGGGATTTCCAACAATTTAATTTTTATATAA

mRNA sequence

ATGGGGGAGAGTGAAGAGTGTTTTGCGGAGAAATGTGGGGCGCCGCTGTATGAGATCCGAACCGGAATTAAAGGTTCTCGTTTATTTCGAATATGGCGCCAAGTTCGCCCCCTTGCTGCTTCATCAACGGTCAAAAAGGGGTGGCGTAAGATTATATGCAGCGGGATTTCCAACAATTTAATTTTTATATAA

Coding sequence (CDS)

ATGGGGGAGAGTGAAGAGTGTTTTGCGGAGAAATGTGGGGCGCCGCTGTATGAGATCCGAACCGGAATTAAAGGTTCTCGTTTATTTCGAATATGGCGCCAAGTTCGCCCCCTTGCTGCTTCATCAACGGTCAAAAAGGGGTGGCGTAAGATTATATGCAGCGGGATTTCCAACAATTTAATTTTTATATAA
Homology
[Close]
BLAST of CSPI05G06230 vs. TrEMBL
Match: A0A0A0KKG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157925 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.8e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGESEECFAEKCGAPLYEIRTGIKGSRLFRIWRQVRPLAASSTVKKGWRKIICSGISNNL 60
          MGESEECFAEKCGAPLYEIRTG+KGSRLFRIWRQVRPLAASSTVKKGWRKIICSGISNNL
Sbjct: 1  MGESEECFAEKCGAPLYEIRTGLKGSRLFRIWRQVRPLAASSTVKKGWRKIICSGISNNL 60

Query: 61 IFI 64
          IFI
Sbjct: 61 IFI 63

[Close]
BLAST of CSPI05G06230 vs. NCBI nr
Match: gi|700195008|gb|KGN50185.1| (hypothetical protein Csa_5G157925 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 6.9e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGESEECFAEKCGAPLYEIRTGIKGSRLFRIWRQVRPLAASSTVKKGWRKIICSGISNNL 60
          MGESEECFAEKCGAPLYEIRTG+KGSRLFRIWRQVRPLAASSTVKKGWRKIICSGISNNL
Sbjct: 1  MGESEECFAEKCGAPLYEIRTGLKGSRLFRIWRQVRPLAASSTVKKGWRKIICSGISNNL 60

Query: 61 IFI 64
          IFI
Sbjct: 61 IFI 63

The following BLAST results are available for this feature:
BLAST of CSPI05G06230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G06230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKG3_CUCSA4.8e-2998.41Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157925 PE=4 SV=1[more]
BLAST of CSPI05G06230 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G06230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195008|gb|KGN50185.1|6.9e-2998.41hypothetical protein Csa_5G157925 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G06230.1CSPI05G06230.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G06230CsaV3_5G003630Cucumber (Chinese Long) v3cpicucB285
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G06230Melon (DHL92) v3.6.1cpimedB338
CSPI05G06230Melon (DHL92) v3.6.1cpimedB396
CSPI05G06230Melon (DHL92) v3.6.1cpimedB398
CSPI05G06230Melon (DHL92) v3.6.1cpimedB399
CSPI05G06230Cucumber (Gy14) v2cgybcpiB127
CSPI05G06230Cucumber (Gy14) v2cgybcpiB130
CSPI05G06230Cucumber (Gy14) v2cgybcpiB131
CSPI05G06230Cucumber (Gy14) v2cgybcpiB226
CSPI05G06230Silver-seed gourdcarcpiB0526
CSPI05G06230Silver-seed gourdcarcpiB0652
CSPI05G06230Silver-seed gourdcarcpiB0902
CSPI05G06230Silver-seed gourdcarcpiB0959
CSPI05G06230Silver-seed gourdcarcpiB0962
CSPI05G06230Silver-seed gourdcarcpiB0977
CSPI05G06230Cucumber (Chinese Long) v3cpicucB269
CSPI05G06230Cucumber (Chinese Long) v3cpicucB262
CSPI05G06230Cucumber (Chinese Long) v3cpicucB268
CSPI05G06230Watermelon (97103) v2cpiwmbB349
CSPI05G06230Watermelon (97103) v2cpiwmbB372
CSPI05G06230Watermelon (97103) v2cpiwmbB401
CSPI05G06230Watermelon (97103) v2cpiwmbB404
CSPI05G06230Watermelon (97103) v2cpiwmbB409
CSPI05G06230Wax gourdcpiwgoB440
CSPI05G06230Wax gourdcpiwgoB487
CSPI05G06230Wild cucumber (PI 183967)cpicpiB111
CSPI05G06230Wild cucumber (PI 183967)cpicpiB115
CSPI05G06230Wild cucumber (PI 183967)cpicpiB116
CSPI05G06230Cucumber (Gy14) v1cgycpiB386
CSPI05G06230Cucumber (Gy14) v1cgycpiB389
CSPI05G06230Cucumber (Gy14) v1cgycpiB457
CSPI05G06230Cucumber (Gy14) v1cgycpiB487
CSPI05G06230Cucumber (Gy14) v1cgycpiB539
CSPI05G06230Cucurbita maxima (Rimu)cmacpiB303
CSPI05G06230Cucurbita maxima (Rimu)cmacpiB614
CSPI05G06230Cucurbita maxima (Rimu)cmacpiB620
CSPI05G06230Cucurbita maxima (Rimu)cmacpiB853
CSPI05G06230Cucurbita maxima (Rimu)cmacpiB854
CSPI05G06230Cucurbita moschata (Rifu)cmocpiB258
CSPI05G06230Cucurbita moschata (Rifu)cmocpiB295
CSPI05G06230Cucurbita moschata (Rifu)cmocpiB606
CSPI05G06230Cucurbita moschata (Rifu)cmocpiB613
CSPI05G06230Cucurbita moschata (Rifu)cmocpiB836
CSPI05G06230Cucurbita moschata (Rifu)cmocpiB837
CSPI05G06230Cucumber (Chinese Long) v2cpicuB222
CSPI05G06230Cucumber (Chinese Long) v2cpicuB225
CSPI05G06230Cucumber (Chinese Long) v2cpicuB226
CSPI05G06230Cucumber (Chinese Long) v2cpicuB240
CSPI05G06230Melon (DHL92) v3.5.1cpimeB348
CSPI05G06230Melon (DHL92) v3.5.1cpimeB398
CSPI05G06230Melon (DHL92) v3.5.1cpimeB401
CSPI05G06230Melon (DHL92) v3.5.1cpimeB403
CSPI05G06230Watermelon (Charleston Gray)cpiwcgB368
CSPI05G06230Watermelon (Charleston Gray)cpiwcgB379
CSPI05G06230Watermelon (Charleston Gray)cpiwcgB414
CSPI05G06230Watermelon (97103) v1cpiwmB381
CSPI05G06230Watermelon (97103) v1cpiwmB408
CSPI05G06230Watermelon (97103) v1cpiwmB416
CSPI05G06230Watermelon (97103) v1cpiwmB412
CSPI05G06230Cucurbita pepo (Zucchini)cpecpiB040
CSPI05G06230Cucurbita pepo (Zucchini)cpecpiB176
CSPI05G06230Cucurbita pepo (Zucchini)cpecpiB625
CSPI05G06230Cucurbita pepo (Zucchini)cpecpiB735
CSPI05G06230Cucurbita pepo (Zucchini)cpecpiB874
CSPI05G06230Cucurbita pepo (Zucchini)cpecpiB875
CSPI05G06230Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G06230Bottle gourd (USVL1VR-Ls)cpilsiB379
CSPI05G06230Bottle gourd (USVL1VR-Ls)cpilsiB390
CSPI05G06230Bottle gourd (USVL1VR-Ls)cpilsiB383