CSPI05G05790 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAGTCCAAACTCTCATTTTATTTCCTTCGAAAATCAAAATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGATCATAGTTCTTTTAGTTGAACATATAATATCAAAAAACATGCATTTAGATTACAACACATCTGGAATTGATCAGTATTTTTGTGTATTATTTCAAATGACTTTTTAGAATGAGAAAA ATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGA ATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGA
BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A0A0KKM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155490 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 4.8e-89 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of CSPI05G05790 vs. TrEMBL
Match: M5WVB6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010653mg PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.3e-22 Identity = 74/176 (42.05%), Postives = 96/176 (54.55%), Query Frame = 1
BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A067K105_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20640 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-21 Identity = 71/179 (39.66%), Postives = 92/179 (51.40%), Query Frame = 1
BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A0D2QLP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G160700 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.3e-21 Identity = 69/160 (43.12%), Postives = 94/160 (58.75%), Query Frame = 1
BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A072TVX4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g096860 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 9.5e-21 Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 1
BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|700194961|gb|KGN50138.1| (hypothetical protein Csa_5G155490 [Cucumis sativus]) HSP 1 Score: 335.1 bits (858), Expect = 6.9e-89 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|1009156413|ref|XP_015896235.1| (PREDICTED: BON1-associated protein 2-like [Ziziphus jujuba]) HSP 1 Score: 125.6 bits (314), Expect = 8.3e-26 Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 1
BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|359474245|ref|XP_003631424.1| (PREDICTED: BON1-associated protein 2-like [Vitis vinifera]) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22 Identity = 69/189 (36.51%), Postives = 104/189 (55.03%), Query Frame = 1
BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|694386499|ref|XP_009369028.1| (PREDICTED: uncharacterized protein LOC103958488 [Pyrus x bretschneideri]) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22 Identity = 77/189 (40.74%), Postives = 101/189 (53.44%), Query Frame = 1
BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|147852113|emb|CAN82266.1| (hypothetical protein VITISV_009284 [Vitis vinifera]) HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22 Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |