CSPI05G05790 (gene) Wild cucumber (PI 183967)

NameCSPI05G05790
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionC2 calcium-dependent membrane targeting
LocationChr5 : 5270175 .. 5270827 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAGTCCAAACTCTCATTTTATTTCCTTCGAAAATCAAAATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGATCATAGTTCTTTTAGTTGAACATATAATATCAAAAAACATGCATTTAGATTACAACACATCTGGAATTGATCAGTATTTTTGTGTATTATTTCAAATGACTTTTTAGAATGAGAAAA

mRNA sequence

ATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGA

Coding sequence (CDS)

ATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGA
BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A0A0KKM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155490 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.8e-89
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1

Query: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH 60
           MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFL LSTVPDDGGFLPSNPIYH
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLTLSTVPDDGGFLPSNPIYH 60

Query: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120
           FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR
Sbjct: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120

Query: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 165
           LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR
Sbjct: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 164

BLAST of CSPI05G05790 vs. TrEMBL
Match: M5WVB6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010653mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-22
Identity = 74/176 (42.05%), Postives = 96/176 (54.55%), Query Frame = 1

Query: 14  VEITVISADGLKNSSSIFSLHRPFRPFLILST-------------VPDDGGFLPSNPIYH 73
           +EITVISA GLK +S   +     R F+ L+T             V D+GG  P+     
Sbjct: 3   MEITVISAQGLKTTSPT-TFSNKIRTFITLTTTNGDHKCHVYSTGVDDEGGINPT----- 62

Query: 74  FGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSY 133
           +GD F +P+D  FF NR   I+L+L+SKRL+ G   +GWC++ A DI   P GS + LSY
Sbjct: 63  WGDKFHVPVDTSFFTNRYSCIYLQLYSKRLIMGRTQLGWCQISAQDIGFPPAGSARYLSY 122

Query: 134 RLRKRDGSRSRVIVNLTLKL-----------VESVMEPC------GTVIGMPVAAV 159
           RLR RDGSR+  IVNL++KL             SV  P       GTVIG PV A+
Sbjct: 123 RLRARDGSRTNGIVNLSVKLENLGPVSGHGQTNSVNAPAFGMCGTGTVIGTPVTAL 172

BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A067K105_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20640 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-21
Identity = 71/179 (39.66%), Postives = 92/179 (51.40%), Query Frame = 1

Query: 14  VEITVISADGLKNSSSIFSLHRPFRPFLILSTVP------------------DDGGFLPS 73
           +EITVISA GLK+ SS    HR  RPF+ ++T P                  D GG  P+
Sbjct: 1   MEITVISAQGLKSKSSGPFSHR-LRPFITITTYPSTPFNGNKKCHVYSTRIDDQGGVNPT 60

Query: 74  NPIYHFGDLFRIPLDVGFFPNRC-FIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSV 133
                +GD F +P+D  F  NR   I L L++KRL+ G  L+GWC++P  DI   PV SV
Sbjct: 61  -----WGDKFHMPIDTAFLANRYNCICLELYTKRLIMGKVLLGWCQIPVTDIGFPPVNSV 120

Query: 134 KRLSYRLRKRDGSRSRVIVNLTLKLV------------------ESVMEPCGTVIGMPV 156
           K LSYR+R RDG+R    VNL +KL                   +   + C TVIG+PV
Sbjct: 121 KHLSYRIRARDGTRGHGTVNLAIKLTGCQPVVGQRLISDSDNHHQKDSDTCETVIGIPV 173

BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A0D2QLP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G160700 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.3e-21
Identity = 69/160 (43.12%), Postives = 94/160 (58.75%), Query Frame = 1

Query: 12  FVVEITVISADGLKNSSSIFSLHR--------PFRPFL----------ILSTVPDDGGFL 71
           F +E+TV+SA GLKN+SS    HR         F P L            + V D GG  
Sbjct: 9   FTLEMTVVSAQGLKNTSSFLFTHRLRPFITITTFPPPLEAADLKSCRGFQTRVDDQGGVN 68

Query: 72  PSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVG 131
           P+     +GD F +P+   FF NR   I+L+LF+KRL+ G A +GWC++PA DI   PVG
Sbjct: 69  PT-----WGDKFLVPIHHTFFANRYSCIYLQLFTKRLISGKAQLGWCQIPAADIGLPPVG 128

Query: 132 SVKRLSYRLRKRDGSRSRVIVNLTLKLVESVMEPCGTVIG 153
           SV++LSYRLR+ DG+R+  +VN+ +KL   VM P G  +G
Sbjct: 129 SVRQLSYRLREADGTRTHGVVNVAVKL--KVM-PLGREVG 160

BLAST of CSPI05G05790 vs. TrEMBL
Match: A0A072TVX4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g096860 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.5e-21
Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 1

Query: 13  VVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYHFGDLFRIPLDVG 72
           ++E+T+IS +GL N +S   L+   +PF+ L+  P      P        ++F +PLD  
Sbjct: 4   ILELTLISTEGLNNYTSY--LNPTIKPFITLTKFPPATSTPPK--ACDNINMFHVPLDPT 63

Query: 73  FF--PNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYRLRKRDGSRSR 132
           FF  P+ C ++L++F+KR + G A +GWC +PA DI  L  GSV+ LSYRLR +DGSR  
Sbjct: 64  FFSDPSSC-LYLQVFTKRRIMGQAQLGWCFIPASDIGLLTPGSVRYLSYRLRGKDGSRGH 123

Query: 133 VIVNLTLK-----LVESVMEPCGTVIGMPVAAVK 160
            I+N++++     L+ S M+ C TVIG+PV   +
Sbjct: 124 AIINISVRLEITTLMSSNMDTCHTVIGIPVTTFR 152

BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|700194961|gb|KGN50138.1| (hypothetical protein Csa_5G155490 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 6.9e-89
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1

Query: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH 60
           MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFL LSTVPDDGGFLPSNPIYH
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLTLSTVPDDGGFLPSNPIYH 60

Query: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120
           FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR
Sbjct: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120

Query: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 165
           LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR
Sbjct: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 164

BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|1009156413|ref|XP_015896235.1| (PREDICTED: BON1-associated protein 2-like [Ziziphus jujuba])

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-26
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 1

Query: 10  PPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH--------- 69
           P   +EITVISA GLK SSSI    R  RPF+ L+TV     + PSN   H         
Sbjct: 12  PLITMEITVISAKGLKASSSIPFSQR-LRPFITLTTVSPTSPYTPSNDGKHCHVYKTRVD 71

Query: 70  --------FGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 129
                   +GD F +P+D  FF NR   I+L+L++KRL+ G   +GWC++PA DI   P 
Sbjct: 72  DQGGVNPTWGDKFHVPIDSTFFTNRYSSIYLQLYTKRLVLGQTQLGWCQIPAHDIGFPPA 131

Query: 130 GSVKRLSYRLRKRDGSRSRVIVNLTLKL-----------VESVMEPCGTVIGMPVAA 158
           GSV+ LSYRLR RDGSR+  I+NL ++            +   ++ C TVIG+PV A
Sbjct: 132 GSVRHLSYRLRARDGSRTNGILNLAIRFEGLENQGLTNSISPTLDTCQTVIGIPVTA 187

BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|359474245|ref|XP_003631424.1| (PREDICTED: BON1-associated protein 2-like [Vitis vinifera])

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 69/189 (36.51%), Postives = 104/189 (55.03%), Query Frame = 1

Query: 11  PFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP---------------------DD 70
           PFV+EIT++SA+GLKN+S+ FS  +  RPF+ L+T P                     D+
Sbjct: 8   PFVIEITIVSAEGLKNTSTFFS--KRIRPFITLTTAPPTPYKPTGADKQSQVYMTRVDDE 67

Query: 71  GGFLPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQ 130
           GG  P+     +GD FR+P++  FF +R   I+L +++KRL+ G   +GWC++PA DI +
Sbjct: 68  GGINPT-----WGDKFRLPMEATFFSHRYSAIYLHIYTKRLMKGKIQLGWCQIPAGDILE 127

Query: 131 --LPVGSVKRLSYRLRKRDGSRSRVIVNLTLKLVES-----------------VMEPCGT 159
              P G+++ LSYRLR RDG+R   IVN+ ++L  S                  ++P   
Sbjct: 128 GFSPAGTLRHLSYRLRDRDGTRGHGIVNVAVRLEGSFPVFQQRPADPGHTQLPAVDPSQM 187

BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|694386499|ref|XP_009369028.1| (PREDICTED: uncharacterized protein LOC103958488 [Pyrus x bretschneideri])

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 77/189 (40.74%), Postives = 101/189 (53.44%), Query Frame = 1

Query: 10  PPFVVEITVISADGLKNSS-SIF---------------SLHRPFRP-------FLILST- 69
           P   +EITV+SA GLK +S S+F               ++  P  P       F    T 
Sbjct: 9   PLMKMEITVLSAQGLKTTSPSLFSNKIRPFITLTTLPGTIAPPCTPKTNGDHTFHAYKTR 68

Query: 70  VPDDGGFLPSNPIYHFGDLFRIPLDVGFFPNRCF-IFLRLFSKRLLFGPALIGWCRMPAD 129
           V D GG  P+     +GD F +P+D  FF NRC  I L+LF+KRL+ G A +GWC++PA 
Sbjct: 69  VDDQGGVNPT-----WGDKFHVPIDTTFFNNRCSCIHLQLFTKRLIMGRAQLGWCQIPAQ 128

Query: 130 DISQLPVGSVKRLSYRLRKRDGSRSRVIVNLTLKL---------------VESVMEPCGT 159
           DI   P GS + LSYRLR RDGSR++ IVNL++KL               + S  + CGT
Sbjct: 129 DIGFPPAGSARFLSYRLRARDGSRTKGIVNLSVKLENLGPVTDHRPLNSTIASAFDMCGT 188

BLAST of CSPI05G05790 vs. NCBI nr
Match: gi|147852113|emb|CAN82266.1| (hypothetical protein VITISV_009284 [Vitis vinifera])

HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22
Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1

Query: 11  PFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP---------------------DD 70
           PFV+EIT++SA+GLKN+S+ FS  +  RPF+ L+T P                     D+
Sbjct: 8   PFVIEITIVSAEGLKNTSTFFS--KRIRPFITLTTAPPTPYKPTGADKQSQVYMTRVDDE 67

Query: 71  GGFLPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQ 130
           GG  P+     +GD FR+P++  FF +R   I+L +++KRL+ G   +GWC++PA DI +
Sbjct: 68  GGINPT-----WGDKFRLPMEATFFSHRYSAIYLHIYTKRLMKGKIQLGWCQIPAGDILE 127

Query: 131 --LPVGSVKRLSYRLRKRDGSRSRVIVNLTLKL 140
              P G+++ LSYRLR RDG+R   IVN+ ++L
Sbjct: 128 GFSPAGTLRHLSYRLRDRDGTRGHGIVNVAVRL 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KKM2_CUCSA4.8e-8999.39Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155490 PE=4 SV=1[more]
M5WVB6_PRUPE2.3e-2242.05Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010653mg PE=4 SV=1[more]
A0A067K105_JATCU1.5e-2139.66Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20640 PE=4 SV=1[more]
A0A0D2QLP7_GOSRA4.3e-2143.13Uncharacterized protein OS=Gossypium raimondii GN=B456_003G160700 PE=4 SV=1[more]
A0A072TVX4_MEDTR9.5e-2139.61Uncharacterized protein OS=Medicago truncatula GN=MTR_8g096860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700194961|gb|KGN50138.1|6.9e-8999.39hypothetical protein Csa_5G155490 [Cucumis sativus][more]
gi|1009156413|ref|XP_015896235.1|8.3e-2642.37PREDICTED: BON1-associated protein 2-like [Ziziphus jujuba][more]
gi|359474245|ref|XP_003631424.1|1.9e-2236.51PREDICTED: BON1-associated protein 2-like [Vitis vinifera][more]
gi|694386499|ref|XP_009369028.1|1.9e-2240.74PREDICTED: uncharacterized protein LOC103958488 [Pyrus x bretschneideri][more]
gi|147852113|emb|CAN82266.1|3.3e-2240.52hypothetical protein VITISV_009284 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G05790.1CSPI05G05790.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainunknownSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 9..136
score: 1.0
NoneNo IPR availablePANTHERPTHR32246FAMILY NOT NAMEDcoord: 4..144
score: 7.3
NoneNo IPR availablePANTHERPTHR32246:SF26SUBFAMILY NOT NAMEDcoord: 4..144
score: 7.3

The following gene(s) are paralogous to this gene:

None