CSPI04G27740 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G27740
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionATP-dependent DNA helicase recG
LocationChr4 : 24401721 .. 24402448 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCATGATGATTGTATTGAGAATGGACAATACAACAATCGATCCAATTCAATTCCATCAGATCCAGACGAAGATTGTGATGTTTCTAAAGCATGTAAAAAATTTCCATCCATCAAGTTGGGAAGTTCTCCTCCAGTTGAATTATTTGATGGCTCGACATGCCATTCAGATATTGTGAGTTTTTTAGCAGCTAAAAGCGGCAAGAATTTTTTTCTGAATTCAACTTGTGAAGAGTGTGAACAAGATAGTCTGGATGGAACCTTGTCTTCTCTGTACCCTGTCCTTCCAGATGTAGAAAATTCTTCAGTTAGAGAAGAATATACTTTGCCCACTGGTTCATCCCTTCTGCCTATAAATATTGAGACTGGAACAATTTTGAGTAATCCAACAGTAGAAGGAGATTCTTCAAAAAAGAAGTCAGAATCAGAAAATAAGGGAGTATCTGGAAGGTCATTTCTTGACCAATCAGTTGGTTGCATATCTGGCTTAAGTAAGAGGCACCAGCGCCAGCTTGAAGATAGTGGCTTTCACACGGCAAGTTTTTGTTGTTTCTATTATTTTTCTCTAATTTGAAGTATAGATGAATGAAGCCTCAAATATACATATATATAATCATTTAATTTGTGTTGGACTAATTCTTTTCCTTTTATTTTCTAGTTAGGCAAATTACTACATCATTTTCCTCGGACCTATGCCGATTTACGGAATCCTCAGGTTCATATTGA

mRNA sequence

ATGGCTCATGATGATTGTATTGAGAATGGACAATACAACAATCGATCCAATTCAATTCCATCAGATCCAGACGAAGATTGTGATGTTTCTAAAGCATGTAAAAAATTTCCATCCATCAAGTTGGGAAGTTCTCCTCCAGTTGAATTATTTGATGGCTCGACATGCCATTCAGATATTGTGAGTTTTTTAGCAGCTAAAAGCGGCAAGAATTTTTTTCTGAATTCAACTTGTGAAGAGTGTGAACAAGATAGTCTGGATGGAACCTTGTCTTCTCTGTACCCTGTCCTTCCAGATGTAGAAAATTCTTCAGTTAGAGAAGAATATACTTTGCCCACTGGTTCATCCCTTCTGCCTATAAATATTGAGACTGGAACAATTTTGAGTAATCCAACAGTAGAAGGAGATTCTTCAAAAAAGAAGTCAGAATCAGAAAATAAGGGAGTATCTGGAAGGTCATTTCTTGACCAATCAGTTGGTTGCATATCTGGCTTAAGTAAGAGGCACCAGCGCCAGCTTGAAGATAGTGGCTTTCACACGGCAATTAGGCAAATTACTACATCATTTTCCTCGGACCTATGCCGATTTACGGAATCCTCAGGTTCATATTGA

Coding sequence (CDS)

ATGGCTCATGATGATTGTATTGAGAATGGACAATACAACAATCGATCCAATTCAATTCCATCAGATCCAGACGAAGATTGTGATGTTTCTAAAGCATGTAAAAAATTTCCATCCATCAAGTTGGGAAGTTCTCCTCCAGTTGAATTATTTGATGGCTCGACATGCCATTCAGATATTGTGAGTTTTTTAGCAGCTAAAAGCGGCAAGAATTTTTTTCTGAATTCAACTTGTGAAGAGTGTGAACAAGATAGTCTGGATGGAACCTTGTCTTCTCTGTACCCTGTCCTTCCAGATGTAGAAAATTCTTCAGTTAGAGAAGAATATACTTTGCCCACTGGTTCATCCCTTCTGCCTATAAATATTGAGACTGGAACAATTTTGAGTAATCCAACAGTAGAAGGAGATTCTTCAAAAAAGAAGTCAGAATCAGAAAATAAGGGAGTATCTGGAAGGTCATTTCTTGACCAATCAGTTGGTTGCATATCTGGCTTAAGTAAGAGGCACCAGCGCCAGCTTGAAGATAGTGGCTTTCACACGGCAATTAGGCAAATTACTACATCATTTTCCTCGGACCTATGCCGATTTACGGAATCCTCAGGTTCATATTGA
Homology
[Close]
BLAST of CSPI04G27740 vs. Swiss-Prot
Match: RECG_ARATH (ATP-dependent DNA helicase homolog RECG, chloroplastic OS=Arabidopsis thaliana GN=RECG PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.4e-11
Identity = 57/161 (35.40%), Postives = 79/161 (49.07%), Query Frame = 1 

Query: 21  SDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLAAKSGKNFFLNSTCEE- 80
           SD     D+  ACK+FPSI LG S PVEL+  S  + +  S L   +  N FL +     
Sbjct: 98  SDEQVKKDLVLACKRFPSIILGDSRPVELYSNSKSYGESSSILKTPT-DNSFLPTPMHGG 157

Query: 81  -CEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIETGTILSNPTVEGDSSK 140
             + D+L  TLSS  P L   ++SS   E  L  GSS               T +  +S+
Sbjct: 158 WFDPDNLSRTLSSFCPELLQNDDSSDPREDILDDGSSF--------------TSKTATSE 217

Query: 141 KKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHT 180
            ++ S++   + R FL  S+  + GLSKRH  QL+  GFHT
Sbjct: 218 VEATSDDVFAAQR-FLATSIDSMPGLSKRHSNQLDSCGFHT 242

[Close]
BLAST of CSPI04G27740 vs. TrEMBL
Match: F6HFI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04880 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23
Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D IEN +    S+    D   + D+S AC+KFPSI LG+SPPVEL+D + CHSD+ S LA
Sbjct: 89  DLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGNSPPVELYDENKCHSDVRSLLA 148

Query: 65  AKSGKNFFLNSTCEECE-QDSLDGTLSSLYPVLPDVENSSVREE--YTLPTGSSLLPINI 124
           A+  + F  +S  E+ +  D    T  SL P LP++  S +R+E   TLP  S   P+ +
Sbjct: 149 AQICEEFLSSSGAEKWDGPDRFSETWPSLCPTLPNINASLLRKESSSTLPVSSQ--PLTM 208

Query: 125 ET---GTILSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFH 184
           ET     +L   TVEG  +    ES+N        LD+S+  I GL KRH RQLE+ GFH
Sbjct: 209 ETKEKSDVL--VTVEGPPANMVLESQNNAEPVELILDKSISFIPGLQKRHCRQLENCGFH 268

Query: 185 TAIRQITTSF 189
           T +R++   F
Sbjct: 269 T-LRKLLQHF 273

[Close]
BLAST of CSPI04G27740 vs. TrEMBL
Match: A0A0R0J484_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G164900 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 68/187 (36.36%), Postives = 101/187 (54.01%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D I NG    +S   P D  +D D+S  CK+FPSI LG +P V+L+DG+   S+ ++ LA
Sbjct: 94  DLIGNGSGEKKSKMSPKDALDDLDISLICKRFPSITLGYAPRVDLYDGTRSCSETMNSLA 153

Query: 65  AKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIETG 124
            ++ +N F +S      Q +L     SLY     + +S++ EE + P   S LP ++   
Sbjct: 154 TENFENSFSDSLEASWVQSTLSEERPSLYASHSSLTSSTLGEEDSCP---SPLPPDLTPS 213

Query: 125 TI---LSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHTAI 184
                L   T E    K + ES++       FLD+SV CI GLSKRH +QL++ GFHT +
Sbjct: 214 IYEEKLDQITREDSQMKVRMESQSNSTPSELFLDKSVSCIPGLSKRHYQQLDNYGFHTVV 273

Query: 185 RQITTSF 189
           R++   F
Sbjct: 274 RKLLLHF 277

[Close]
BLAST of CSPI04G27740 vs. TrEMBL
Match: K7L254_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 68/187 (36.36%), Postives = 101/187 (54.01%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D I NG    +S   P D  +D D+S  CK+FPSI LG +P V+L+DG+   S+ ++ LA
Sbjct: 102 DLIGNGSGEKKSKMSPKDALDDLDISLICKRFPSITLGYAPRVDLYDGTRSCSETMNSLA 161

Query: 65  AKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIETG 124
            ++ +N F +S      Q +L     SLY     + +S++ EE + P   S LP ++   
Sbjct: 162 TENFENSFSDSLEASWVQSTLSEERPSLYASHSSLTSSTLGEEDSCP---SPLPPDLTPS 221

Query: 125 TI---LSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHTAI 184
                L   T E    K + ES++       FLD+SV CI GLSKRH +QL++ GFHT +
Sbjct: 222 IYEEKLDQITREDSQMKVRMESQSNSTPSELFLDKSVSCIPGLSKRHYQQLDNYGFHTVV 281

Query: 185 RQITTSF 189
           R++   F
Sbjct: 282 RKLLLHF 285

[Close]
BLAST of CSPI04G27740 vs. TrEMBL
Match: A0A0B2QAH3_GLYSO (ATP-dependent DNA helicase recG (Fragment) OS=Glycine soja GN=glysoja_033723 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.8e-19
Identity = 68/187 (36.36%), Postives = 101/187 (54.01%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D I NG    +S   P D  +D D+S  CK+FPSI LG +P V+L+DG+   S+ ++ LA
Sbjct: 102 DLIGNGSGEKKSKMSPKDALDDLDISLICKRFPSITLGYAPRVDLYDGTRSCSETMNSLA 161

Query: 65  AKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIETG 124
            ++ +N F +S      Q +L     SLY     + +S++ EE + P   S LP ++   
Sbjct: 162 TENFENSFSDSLEASWVQSTLSEERPSLYASHSSLTSSTLGEEDSCP---SPLPPDLTPS 221

Query: 125 TI---LSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHTAI 184
                L   T E    K + ES++       FLD+SV CI GLSKRH +QL++ GFHT +
Sbjct: 222 IYEEKLDQITREDSQMKVRMESQSNSTPSELFLDKSVSCIPGLSKRHYQQLDNYGFHT-L 281

Query: 185 RQITTSF 189
           R++   F
Sbjct: 282 RKLLLHF 284

[Close]
BLAST of CSPI04G27740 vs. TrEMBL
Match: A0A0S3T1G0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G031100 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18
Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D I NG    +S   P D  +D D+S  CK+FPSI LGS+  V+L+DG+T  S+ ++ L 
Sbjct: 70  DLIGNGSDEMKSEMSPKDALDDVDISLICKRFPSITLGSAARVDLYDGTTSCSETMNSLT 129

Query: 65  AKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIETG 124
            ++ +N F NS+     Q +L     SLY     V +S+  ++       SLLP  + + 
Sbjct: 130 TENFENCFSNSSETRWVQSALSEEWPSLYVKHSSVSSSTSGKD-------SLLPDLMSSI 189

Query: 125 TILSNPTVEGDSSKKK--SESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHTAIR 184
              ++  + G+  + K   ES+        FLD+S+ CI GLSKRH R+LED GFHT +R
Sbjct: 190 QEKNSDQITGEDCQMKVAMESQPNPTLSELFLDKSINCIPGLSKRHYRKLEDCGFHT-LR 247

Query: 185 QITTSF 189
           ++   F
Sbjct: 250 KLLLHF 247

[Close]
BLAST of CSPI04G27740 vs. TAIR10
Match: AT2G01440.1 (AT2G01440.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 57/161 (35.40%), Postives = 79/161 (49.07%), Query Frame = 1 

Query: 21  SDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLAAKSGKNFFLNSTCEE- 80
           SD     D+  ACK+FPSI LG S PVEL+  S  + +  S L   +  N FL +     
Sbjct: 98  SDEQVKKDLVLACKRFPSIILGDSRPVELYSNSKSYGESSSILKTPT-DNSFLPTPMHGG 157

Query: 81  -CEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIETGTILSNPTVEGDSSK 140
             + D+L  TLSS  P L   ++SS   E  L  GSS               T +  +S+
Sbjct: 158 WFDPDNLSRTLSSFCPELLQNDDSSDPREDILDDGSSF--------------TSKTATSE 217

Query: 141 KKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHT 180
            ++ S++   + R FL  S+  + GLSKRH  QL+  GFHT
Sbjct: 218 VEATSDDVFAAQR-FLATSIDSMPGLSKRHSNQLDSCGFHT 242

[Close]
BLAST of CSPI04G27740 vs. NCBI nr
Match: gi|778730665|ref|XP_011659838.1| (PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 4.2e-96
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 1 

Query: 1   MAHDDCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIV 60
           MAHDDCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIV
Sbjct: 67  MAHDDCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIV 126

Query: 61  SFLAAKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPIN 120
           SFL AKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPIN
Sbjct: 127 SFLEAKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPIN 186

Query: 121 IETGTILSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHT 180
           IETGTILSNPTV+GDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHT
Sbjct: 187 IETGTILSNPTVDGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHT 245

[Close]
BLAST of CSPI04G27740 vs. NCBI nr
Match: gi|659109546|ref|XP_008454766.1| (PREDICTED: uncharacterized protein LOC103495086 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 9.1e-83
Identity = 158/179 (88.27%), Postives = 162/179 (90.50%), Query Frame = 1 

Query: 1   MAHDDCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIV 60
           MAHDDCIENGQYNN+SNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGS CHSDI 
Sbjct: 67  MAHDDCIENGQYNNQSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSACHSDIA 126

Query: 61  SFLAAKSGKNFFLNSTCEECEQDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPIN 120
           SFLAAKS KNF+LNSTCEEC QD  D TL SLYP LPDV NSSV EEYTL TGSSLLP+N
Sbjct: 127 SFLAAKSSKNFYLNSTCEECVQDE-DRTLPSLYPALPDVGNSSVSEEYTLTTGSSLLPMN 186

Query: 121 IETGTILSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHT 180
           IETGTI SNP VEGDSSKKKS SEN  VSGRSFLDQSVGCISGLSKRHQRQL+DSGFHT
Sbjct: 187 IETGTISSNPAVEGDSSKKKSTSENTAVSGRSFLDQSVGCISGLSKRHQRQLDDSGFHT 244

[Close]
BLAST of CSPI04G27740 vs. NCBI nr
Match: gi|731369649|ref|XP_010657288.1| (PREDICTED: uncharacterized protein LOC100252614 isoform X1 [Vitis vinifera])

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D IEN +    S+    D   + D+S AC+KFPSI LG+SPPVEL+D + CHSD+ S LA
Sbjct: 98  DLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGNSPPVELYDENKCHSDVRSLLA 157

Query: 65  AKSGKNFFLNSTCEECE-QDSLDGTLSSLYPVLPDVENSSVREE--YTLPTGSSLLPINI 124
           A+  + F  +S  E+ +  D    T  SL P LP++  S +R+E   TLP  S   P+ +
Sbjct: 158 AQICEEFLSSSGAEKWDGPDRFSETWPSLCPTLPNINASLLRKESSSTLPVSSQ--PLTM 217

Query: 125 ET---GTILSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFH 184
           ET     +L   TVEG  +    ES+N        LD+S+  I GL KRH RQLE+ GFH
Sbjct: 218 ETKEKSDVL--VTVEGPPANMVLESQNNAEPVELILDKSISFIPGLQKRHCRQLENCGFH 277

Query: 185 TAIRQITTSF 189
           T +R++   F
Sbjct: 278 T-LRKLLQHF 282

[Close]
BLAST of CSPI04G27740 vs. NCBI nr
Match: gi|731369655|ref|XP_010657359.1| (PREDICTED: uncharacterized protein LOC100252614 isoform X2 [Vitis vinifera])

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D IEN +    S+    D   + D+S AC+KFPSI LG+SPPVEL+D + CHSD+ S LA
Sbjct: 59  DLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGNSPPVELYDENKCHSDVRSLLA 118

Query: 65  AKSGKNFFLNSTCEECE-QDSLDGTLSSLYPVLPDVENSSVREE--YTLPTGSSLLPINI 124
           A+  + F  +S  E+ +  D    T  SL P LP++  S +R+E   TLP  S   P+ +
Sbjct: 119 AQICEEFLSSSGAEKWDGPDRFSETWPSLCPTLPNINASLLRKESSSTLPVSSQ--PLTM 178

Query: 125 ET---GTILSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFH 184
           ET     +L   TVEG  +    ES+N        LD+S+  I GL KRH RQLE+ GFH
Sbjct: 179 ETKEKSDVL--VTVEGPPANMVLESQNNAEPVELILDKSISFIPGLQKRHCRQLENCGFH 238

Query: 185 TAIRQITTSF 189
           T +R++   F
Sbjct: 239 T-LRKLLQHF 243

[Close]
BLAST of CSPI04G27740 vs. NCBI nr
Match: gi|297737705|emb|CBI26906.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 72/185 (38.92%), Postives = 100/185 (54.05%), Query Frame = 1 

Query: 5   DCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHSDIVSFLA 64
           D IEN +    S+    D   + D+S AC+KFPSI LG+SPPVEL+D + CHSD+ S LA
Sbjct: 98  DLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGNSPPVELYDENKCHSDVRSLLA 157

Query: 65  AKSGKNFFLNSTCEECE-QDSLDGTLSSLYPVLPDVENSSVREEYTLPTGSSLLPINIET 124
           A+  + F  +S  E+ +  D    T  SL P LP++  S +R+E              + 
Sbjct: 158 AQICEEFLSSSGAEKWDGPDRFSETWPSLCPTLPNINASLLRKE--------------KK 217

Query: 125 GTILSNPTVEGDSSKKKSESENKGVSGRSFLDQSVGCISGLSKRHQRQLEDSGFHTAIRQ 184
             +L   TVEG  +    ES+N        LD+S+  I GL KRH RQLE+ GFHT +R+
Sbjct: 218 SDVL--VTVEGPPANMVLESQNNAEPVELILDKSISFIPGLQKRHCRQLENCGFHT-LRK 265

Query: 185 ITTSF 189
           +   F
Sbjct: 278 LLQHF 265

The following BLAST results are available for this feature:
BLAST of CSPI04G27740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RECG_ARATH5.4e-1135.40ATP-dependent DNA helicase homolog RECG, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of CSPI04G27740 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HFI2_VITVI1.9e-2341.58Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04880 PE=4 SV=... [more]
A0A0R0J484_SOYBN1.2e-2036.36Uncharacterized protein OS=Glycine max GN=GLYMA_07G164900 PE=4 SV=1[more]
K7L254_SOYBN1.2e-2036.36Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2QAH3_GLYSO3.8e-1936.36ATP-dependent DNA helicase recG (Fragment) OS=Glycine soja GN=glysoja_033723 PE=... [more]
A0A0S3T1G0_PHAAN1.9e-1836.02Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G031100 PE=... [more]
BLAST of CSPI04G27740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01440.13.1e-1235.40 DEAD/DEAH box RNA helicase family protein [more]
BLAST of CSPI04G27740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730665|ref|XP_011659838.1|4.2e-9698.88PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus][more]
gi|659109546|ref|XP_008454766.1|9.1e-8388.27PREDICTED: uncharacterized protein LOC103495086 [Cucumis melo][more]
gi|731369649|ref|XP_010657288.1|2.8e-2341.58PREDICTED: uncharacterized protein LOC100252614 isoform X1 [Vitis vinifera][more]
gi|731369655|ref|XP_010657359.1|2.8e-2341.58PREDICTED: uncharacterized protein LOC100252614 isoform X2 [Vitis vinifera][more]
gi|297737705|emb|CBI26906.3|1.3e-2038.92unnamed protein product [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G27740.1CSPI04G27740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G27740CsaUNG014590Cucumber (Chinese Long) v2cpicuB180
CSPI04G27740MELO3C018324Melon (DHL92) v3.5.1cpimeB265
CSPI04G27740Cucsa.234830Cucumber (Gy14) v1cgycpiB347
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G27740Watermelon (97103) v2cpiwmbB335
CSPI04G27740Wax gourdcpiwgoB417
CSPI04G27740Cucurbita maxima (Rimu)cmacpiB719
CSPI04G27740Cucurbita maxima (Rimu)cmacpiB720
CSPI04G27740Cucurbita pepo (Zucchini)cpecpiB404
CSPI04G27740Cucurbita moschata (Rifu)cmocpiB712
CSPI04G27740Cucurbita moschata (Rifu)cmocpiB713
CSPI04G27740Watermelon (Charleston Gray)cpiwcgB345
CSPI04G27740Cucurbita pepo (Zucchini)cpecpiB402
CSPI04G27740Bottle gourd (USVL1VR-Ls)cpilsiB294
CSPI04G27740Melon (DHL92) v3.6.1cpimedB261
CSPI04G27740Cucumber (Gy14) v2cgybcpiB223
CSPI04G27740Silver-seed gourdcarcpiB0204
CSPI04G27740Silver-seed gourdcarcpiB0701
CSPI04G27740Cucumber (Chinese Long) v3cpicucB235