CSPI04G24660 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGCAGACCAAGTGTTGATAAGATGTCCCACTACGACAATCCACTCATCCAAGCTTTCTATTTTACCCATAGCGCCATGTGTTGTTTGGACGTGTCACGGCATGATCAAAAACTCTACCGTGCTCATTTCGTTGGGTTAAAAAGCAGAGGATGAGACAATTTTGAGTTTCCTTTTCCAATTTCCATGTGTGAACGAGGTGGCTAGTTTTCAATACCAGAACTTCCCCAACTACTCCATTAATTGATTGCACCCACACTACGATGCCGTTTTCCTGTCCTTTATACCATTAGTAGAATAATCTCTGTACAGTGTTTTTCCACTTTTATTCGTGCTATCATCACTGGCTCCCATTTTATCCGACGGCGAAGAAACTCCCTATATATTTGCAAAGAGTTCTTCTCTGGGGCGACGTGTGGTTGATTCAGAATTTGAAACCCTTCCTGTTGAAAAATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAATCTGGAAAAACAAAAGGCCTCAAGAGGTAATCAACCTCCCACTGTATTCTTTCAGTTTGGCTTCTGTGAGAATAATTTGCGAAGCTCACGTGATTGCTCAAAATATATGTTGTACAAACATAAATTTCATTAGTAGATGGTCTAGATCAACCAAATCTAGCTGCTTTACTAATTTAGATGTCAAGTATGATAACTGAAATGATTATTACTATGGCCTTATTTTTCTTTGTTCTTTGTGGGCTTTTGATGATTTCTCTGTATAAAGTTCAGAGTTGATTATAATTGTAATGATTTACACAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGGTAAAATTCTGAGTCTGATCTGATGTACCTAATTCGTTTCCTTGAGAGGGAGAAATATTGAATTAATAGTGACAATTACTCCTTGTTTAGCTTGTTGGTTAAAACTTGAAGTGTTCATGAAAGTGGGTTATTATGAAATTGTTGCAGTGCAAGGTATGCATGCAAACATTTATATGTACAACGACAGAGGTGAAGTGCAGGGAACATGCTGAAGCAAGGCACCCAAAATCTGACGTCTATGCTTGTTTTCCTCATCTTAAGAAATGATAATCAATCAACTTTTAGCTTTATCCTCGCTTCTCTTCTCTCTTTAGCCCAAATGCTCCTACAGGCCAAACGCCTTTCAATGTAATAACACATCCTTGTAGTAAAAAAAAAAAAATGATCTATATATTTATATGTTAATAAAGCTTCAACCTTGCTGTTTGTTTTCCTTTACTTACAAGTTACAAGTTACAAGTTACAAGAATTTTTTGTGTAAATTCGAACTTTCTGATATGCTCAACTCATTTGGCAAATGCTTATGAAACTTCTTAAATAGAATTGGCCAACGATCT ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAATCTGGAAAAACAAAAGGCCTCAAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAAACATTTATATGTACAACGACAGAGGTGAAGTGCAGGGAACATGCTGAAGCAAGGCACCCAAAATCTGACGTCTATGCTTGTTTTCCTCATCTTAAGAAATGA ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAATCTGGAAAAACAAAAGGCCTCAAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAAACATTTATATGTACAACGACAGAGGTGAAGTGCAGGGAACATGCTGAAGCAAGGCACCCAAAATCTGACGTCTATGCTTGTTTTCCTCATCTTAAGAAATGA
BLAST of CSPI04G24660 vs. Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.8e-29 Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 1
BLAST of CSPI04G24660 vs. TrEMBL
Match: A0A0A0KZW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G642360 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 8.5e-36 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of CSPI04G24660 vs. TrEMBL
Match: A0A067KZL2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16048 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.0e-33 Identity = 71/77 (92.21%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of CSPI04G24660 vs. TrEMBL
Match: W1P6X9_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00144p00063280 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 8.8e-33 Identity = 70/77 (90.91%), Postives = 76/77 (98.70%), Query Frame = 1
BLAST of CSPI04G24660 vs. TrEMBL
Match: A0A059BJ88_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00119 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 8.8e-33 Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 1
BLAST of CSPI04G24660 vs. TrEMBL
Match: A9NJX4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.5e-32 Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 1
BLAST of CSPI04G24660 vs. TAIR10
Match: AT2G23090.1 (AT2G23090.1 Uncharacterised protein family SERF) HSP 1 Score: 128.3 bits (321), Expect = 2.1e-30 Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 1
BLAST of CSPI04G24660 vs. NCBI nr
Match: gi|449447051|ref|XP_004141283.1| (PREDICTED: uncharacterized protein At2g23090-like [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 1.2e-35 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of CSPI04G24660 vs. NCBI nr
Match: gi|659103495|ref|XP_008452628.1| (PREDICTED: uncharacterized protein At2g23090-like [Cucumis melo]) HSP 1 Score: 156.0 bits (393), Expect = 2.7e-35 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of CSPI04G24660 vs. NCBI nr
Match: gi|802570652|ref|XP_012068249.1| (PREDICTED: uncharacterized protein At2g23090-like [Jatropha curcas]) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33 Identity = 71/77 (92.21%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of CSPI04G24660 vs. NCBI nr
Match: gi|1009135586|ref|XP_015885066.1| (PREDICTED: uncharacterized protein At2g23090-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33 Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 1
BLAST of CSPI04G24660 vs. NCBI nr
Match: gi|1009135588|ref|XP_015885067.1| (PREDICTED: uncharacterized protein At2g23090-like isoform X2 [Ziziphus jujuba]) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33 Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |