CSPI04G20320 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAAAGAACATTGGTGAGTTTTCTAGAGATTTCGTAGTCGGCAAGGCAATCCAAGGTGGAGTTCTTAATCGGTGTGACATCGGAGTTATTTTGTACGTCGACACTCTTTCCCTTTGGTCAAATACTCTACTTTGGTGCTCCTTCGTTCTTTTCTGCTCTTTCAAGTTTCAACAGGTAAGATTCACGGTTAATTCTCAATTTCCTGCTTTCAAACCCCATTTCCTTGATTTCTTCACTCCTCGATTTATTTCTTTTCGCAAAATATGGACTATCTTTTGATAGAATCACGATTGTGTCATCAATTTAGTGAATTTGTTTTTTCCTCTGTTGCATGTTCTTGGTTTTGTGATTGTATAATGGGAACACTTGCTGCTCGCTCGTTGTTCAAATTATTGCTTTTTTTTAGGCTTTGAATACTCGAATGCCATTTCTCAATAGGTGTAGTTTTTATGTTTTGATCTTTAATGGTTGCGAGCTATGTGAGTTACCATAGATGATTTGTTTTGTGTTAAGCTATGTGGACTGCTTTAAAATTGAATTTATTTGGATTTGGAATGGTCTTGAATTTTGAGGATTTGGTACTGCTAATTATTTATAGGGGTTCCATTTTGGAAGTAGGACTATAGGTTTCCAGCCTAATATTTTGTATATCGTGTATGCACAACCTTGGCCGTTTCCTGTACATAATATAAAAATCACAACCAATAAAATGGCACATGTCAAAATCGACCTAATGACACGTCAGAGATTGGAGAGATATTTTTAGCAAGCAGTGGACGCAAGGCTAAAAGTCATCTTCAGCTATGCCAAACTTTTAATGCATTGCTATGGCAACCCAGTTCTTCCACTTGAACCTTAACTATAATTTGGTATTTATTTCTTCCTGAAATAGATACTACATTTATGTAAGAATAAGGGTTTGCTTCAGGAAGTTTGTGTGAGGACCCTAGATAGGAAAACAGCATAGAAAATGAAGATGGTTACTGGTGGGGCATGTTAGCGAATAGTTAGTAAGTTAGTTAGGTCTTTTTGTTATAAATAGTAGGAGAGTGGTTGAGGAGAGGTGTGAAGAATTTTGTGGAGGGATTTCCTTGTAAAGGGAATTTGGGAGAGTCCAGCCCTCTCGAAAGGTTAGGTTACTTTGTTGCTTGTCTTGTGGTATTCTAGAATATATTACATATATTTTCATATTTGATTGTTCTATAACTGTTCTTGAGCTCATCCTTTGTTCTTGAGATAGTTCTTGTTAGGAGGGATCTTAACAGTTTGGTACCCTAGTTATATCTATATATTTTTTTTGAAACAATATTTTCTTGAGTTGCAATGCATGAGAATGCTGCTCTTTCCTCTTTGTATTATTGTTCCTACTTTAACCAACTTTTTATTGGATACTATAGGGAATAAGCACAGGCAGGAATGTTACCACTGCTAGCTTACCAAGTAGTGAGCCAATACTACAGGCTCCAAGGGAACCCGATCACTCTGGGGCTCCTTGCCTCTAATACTCTCATTCATCTAAGGCCCAATTTTCTTCATCATATCATCCCTTCCATAGATGAGGTCTGGTTTAATGCACATCTCATCTTCAAGGTGACTATTCTGGCTAATAATCTAATTCTATTCTGCTGTTCTCTGTTTAAGACTTAACTGCACTCTCTATGTTAGAGTTAATTGGTGATGATTATAAAAATTTAATGAGAGATCTTTCTGCTGAGGACTTTCCTATTCATTAATACATCGGTAGGGAAGTCCTAAACAGAATGGCACGTTACTTTCTCTGGAATAAAGCATTGCTGTCTCATTGAGAAATTGGTATCATGTTTCTTTTTTGATCAGCTGTATAAATAATCTTGTAGTTTCCTTAGATACTGACTACCTGCTTTATAGCATCATTGAAGCGAATAGGTCTTTATTTATTTATTGAACTTTTTAGCTGTGAAGTCATTTTTCATTGAGAAAAATGGAAGAAATAAGTAGATACTAGTTGAATTTGTATGCTTTAACCATAAGAAATGGTTCTTGTATGATGTTGAACGTTACAAAACACATATAGATTGGGTAGCCCCCACATAACTGTGTAATTTGTGTCCTTACAAATCGTCCTCATAGTGAGGTTGTTGTATGATGGCCTCAAATTATAGTTAAACTTTTATTTTGAGAAAAATGAAAAGCTTTTAAGAGTTTGCTTTGATTTTTGTACAATATTCACAGTTTCTTTCTTTTCAGTATTGTACTTCTTTAATCCATCTTGATGAGTATATACCTAACAATTTTGAACTCCTGTAGGATTATTTTCTTTTTTGTTGTTTATTAACTTGTTTGCATGTCGTTTTTGAATGAGATAATGTGATATTGGCATTCCTGTTACTGTCATAATATTGGTATCATTTGCATTTCCCACTTTGCCAGCACAAGGACTTGAAGCGTTTTTTACTATCACCATTCTACCATGTGGGTGACCCTCACCTTGTCTACAACATGATATCTCTACTATGGAAAGGCACTCAGTTGGAAACATCAATGGGTAGCATCGAATTTGCTTCAATGGTTGGTGCATTACTCATAATGTCGCAGGGAATTACCTTGTTGCTCATCAAATCCTTACTGATATTCTTTAATTATGGGAGGCCTTACTACTATGAATATTCTGTTGGGTTTTCCGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTGAAACTGACAGCTACACTTACGTTTATGGTCTAAGAGTACCATCAAGTCATGCTGCATGGTTGGAACTAATACTTATCCAAATGGTTTCACCTGGTGTCTCTTTCCTTGGTCATCTTGGTGGTATACTTGCTGGTCTTCTCTTTTTGCGTCTGAAGGGTACGAATTCAGGGTCGGATCCATTGACACTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTTCTTATGGATTTTTCTGCCGCTTGAATCCCTTTCGGCAGCGTAGGATATTTGGAGGAGGAACGGTCGGTTCAAGGCCTGTAACGAGCATCGGCACATGGAGGTGTCAGGCATGTACATTTGACAATTCTGGTTTATTAAGTGCGTGTGAAATGTGTGGGACAGATCGGCAGGATGGGGTGCTGCATTCTAACCAATTATCGAGTCAATTGGATTTGACTTGGGAGGAAATGCGTCGTCGGAGACTTGAAAGATTTGGTTGATGGTAGAATAGATTGTTCATTTTCTCAGGCCACCAGATATTTACTTTTAGAAGAGTAAATTGAAAGGCTACTAGATGTTGAAGTTGTTTACACCATCTTTCGGAAATGATGAAGTTGTTTACTAGACGTTGAAAAAATGAAGTGGTATGGAGCATGGAGCTTGTGTTTAGGAACATAGCAAATTTGATTGAACACAGATAGAAAAGTCTTTGTACACGGGGAAGGAATTAACATACTTTCTTTTCATCATTGGTTTTCTATATGACATCTCTTCATGTAGCTGCTTCTTGATAACGGTTGAATAGATTTCTAATTGAAGTAATTGTTACACGAATGGCATCTATGATTGTTGTTGCAAGTTTTTCTAATGTGAAGGTTAATAATCAACCAAAAACTGACATTGCTAATGAACGGTTTGTCCTTTAATTG ATGTTACCACTGCTAGCTTACCAAGTAGTGAGCCAATACTACAGGCTCCAAGGGAACCCGATCACTCTGGGGCTCCTTGCCTCTAATACTCTCATTCATCTAAGGCCCAATTTTCTTCATCATATCATCCCTTCCATAGATGAGGTCTGGTTTAATGCACATCTCATCTTCAAGCACAAGGACTTGAAGCGTTTTTTACTATCACCATTCTACCATGTGGGTGACCCTCACCTTGTCTACAACATGATATCTCTACTATGGAAAGGCACTCAGTTGGAAACATCAATGGGTAGCATCGAATTTGCTTCAATGGTTGGTGCATTACTCATAATGTCGCAGGGAATTACCTTGTTGCTCATCAAATCCTTACTGATATTCTTTAATTATGGGAGGCCTTACTACTATGAATATTCTGTTGGGTTTTCCGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTGAAACTGACAGCTACACTTACGTTTATGGTCTAAGAGTACCATCAAGTCATGCTGCATGGTTGGAACTAATACTTATCCAAATGGTTTCACCTGGTGTCTCTTTCCTTGGTCATCTTGGTGGTATACTTGCTGGTCTTCTCTTTTTGCGTCTGAAGGGTACGAATTCAGGGTCGGATCCATTGACACTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTTCTTATGGATTTTTCTGCCGCTTGAATCCCTTTCGGCAGCGTAGGATATTTGGAGGAGGAACGGTCGGTTCAAGGCCTGTAACGAGCATCGGCACATGGAGGTGTCAGGCATGTACATTTGACAATTCTGGTTTATTAAGTGCGTGTGAAATGTGTGGGACAGATCGGCAGGATGGGGTGCTGCATTCTAACCAATTATCGAGTCAATTGGATTTGACTTGGGAGGAAATGCGTCGTCGGAGACTTGAAAGATTTGGTTGA ATGTTACCACTGCTAGCTTACCAAGTAGTGAGCCAATACTACAGGCTCCAAGGGAACCCGATCACTCTGGGGCTCCTTGCCTCTAATACTCTCATTCATCTAAGGCCCAATTTTCTTCATCATATCATCCCTTCCATAGATGAGGTCTGGTTTAATGCACATCTCATCTTCAAGCACAAGGACTTGAAGCGTTTTTTACTATCACCATTCTACCATGTGGGTGACCCTCACCTTGTCTACAACATGATATCTCTACTATGGAAAGGCACTCAGTTGGAAACATCAATGGGTAGCATCGAATTTGCTTCAATGGTTGGTGCATTACTCATAATGTCGCAGGGAATTACCTTGTTGCTCATCAAATCCTTACTGATATTCTTTAATTATGGGAGGCCTTACTACTATGAATATTCTGTTGGGTTTTCCGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTGAAACTGACAGCTACACTTACGTTTATGGTCTAAGAGTACCATCAAGTCATGCTGCATGGTTGGAACTAATACTTATCCAAATGGTTTCACCTGGTGTCTCTTTCCTTGGTCATCTTGGTGGTATACTTGCTGGTCTTCTCTTTTTGCGTCTGAAGGGTACGAATTCAGGGTCGGATCCATTGACACTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTTCTTATGGATTTTTCTGCCGCTTGAATCCCTTTCGGCAGCGTAGGATATTTGGAGGAGGAACGGTCGGTTCAAGGCCTGTAACGAGCATCGGCACATGGAGGTGTCAGGCATGTACATTTGACAATTCTGGTTTATTAAGTGCGTGTGAAATGTGTGGGACAGATCGGCAGGATGGGGTGCTGCATTCTAACCAATTATCGAGTCAATTGGATTTGACTTGGGAGGAAATGCGTCGTCGGAGACTTGAAAGATTTGGTTGA
BLAST of CSPI04G20320 vs. Swiss-Prot
Match: RBL14_ARATH (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana GN=RBL14 PE=2 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 2.1e-102 Identity = 193/320 (60.31%), Postives = 237/320 (74.06%), Query Frame = 1
BLAST of CSPI04G20320 vs. Swiss-Prot
Match: RHBL4_MOUSE (Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.4e-26 Identity = 101/316 (31.96%), Postives = 150/316 (47.47%), Query Frame = 1
BLAST of CSPI04G20320 vs. Swiss-Prot
Match: RHBL4_HUMAN (Rhomboid-related protein 4 OS=Homo sapiens GN=RHBDD1 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 6.0e-25 Identity = 81/234 (34.62%), Postives = 120/234 (51.28%), Query Frame = 1
BLAST of CSPI04G20320 vs. Swiss-Prot
Match: RHBL4_RAT (Rhomboid-related protein 4 OS=Rattus norvegicus GN=Rhbdd1 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.6e-23 Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 1
BLAST of CSPI04G20320 vs. Swiss-Prot
Match: RHBL4_PONAB (Rhomboid-related protein 4 OS=Pongo abelii GN=RHBDD1 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.8e-22 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1
BLAST of CSPI04G20320 vs. TrEMBL
Match: A0A0A0L173_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G506850 PE=4 SV=1) HSP 1 Score: 630.2 bits (1624), Expect = 1.4e-177 Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 1
BLAST of CSPI04G20320 vs. TrEMBL
Match: A0A067JVV7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19107 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 5.3e-113 Identity = 214/320 (66.88%), Postives = 256/320 (80.00%), Query Frame = 1
BLAST of CSPI04G20320 vs. TrEMBL
Match: B9HXC8_POPTR (Rhomboid family protein OS=Populus trichocarpa GN=POPTR_0010s00720g PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107 Identity = 207/318 (65.09%), Postives = 243/318 (76.42%), Query Frame = 1
BLAST of CSPI04G20320 vs. TrEMBL
Match: A0A0A7E6S4_9AQUA (Rhomboid protein Ilepu_RBL14 OS=Ilex purpurea PE=2 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106 Identity = 208/317 (65.62%), Postives = 247/317 (77.92%), Query Frame = 1
BLAST of CSPI04G20320 vs. TrEMBL
Match: A5BGK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01120 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.6e-104 Identity = 208/323 (64.40%), Postives = 246/323 (76.16%), Query Frame = 1
BLAST of CSPI04G20320 vs. TAIR10
Match: AT3G17611.1 (AT3G17611.1 RHOMBOID-like protein 14) HSP 1 Score: 373.6 bits (958), Expect = 1.2e-103 Identity = 193/320 (60.31%), Postives = 237/320 (74.06%), Query Frame = 1
BLAST of CSPI04G20320 vs. TAIR10
Match: AT3G58460.2 (AT3G58460.2 RHOMBOID-like protein 15) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13 Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 1
BLAST of CSPI04G20320 vs. NCBI nr
Match: gi|449457305|ref|XP_004146389.1| (PREDICTED: uncharacterized protein At3g17611 [Cucumis sativus]) HSP 1 Score: 630.2 bits (1624), Expect = 2.0e-177 Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 1
BLAST of CSPI04G20320 vs. NCBI nr
Match: gi|659082947|ref|XP_008442110.1| (PREDICTED: uncharacterized protein At3g17611 [Cucumis melo]) HSP 1 Score: 605.5 bits (1560), Expect = 5.2e-170 Identity = 301/314 (95.86%), Postives = 307/314 (97.77%), Query Frame = 1
BLAST of CSPI04G20320 vs. NCBI nr
Match: gi|802706995|ref|XP_012084232.1| (PREDICTED: uncharacterized protein At3g17611 [Jatropha curcas]) HSP 1 Score: 415.6 bits (1067), Expect = 7.6e-113 Identity = 214/320 (66.88%), Postives = 256/320 (80.00%), Query Frame = 1
BLAST of CSPI04G20320 vs. NCBI nr
Match: gi|743910992|ref|XP_010999348.1| (PREDICTED: uncharacterized protein At3g17611 [Populus euphratica]) HSP 1 Score: 400.6 bits (1028), Expect = 2.5e-108 Identity = 209/318 (65.72%), Postives = 244/318 (76.73%), Query Frame = 1
BLAST of CSPI04G20320 vs. NCBI nr
Match: gi|1009179812|ref|XP_015871286.1| (PREDICTED: rhomboid-like protein 14, mitochondrial [Ziziphus jujuba]) HSP 1 Score: 399.4 bits (1025), Expect = 5.7e-108 Identity = 212/317 (66.88%), Postives = 243/317 (76.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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