CSPI04G20250 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G20250
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 18346183 .. 18346664 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCTGGTTTATGGGATAAAGCTATCACTAGTCCATTATGCAATGGCAGCAACCCAATGGATGGTTCGATCAAGTCAATGCTTTGTCAATTAACAATTAACAATCTCTCCAGCAGGTTTGTGCACGATCAGGGAAGCTCTAGCAAGACTTTTTATGGGTAGAAAGGAGGTGGCAATTGCATTTGTTGGGCAATTTCTAGCTGACATTGATTATTCAATTAAATCTAAGCAAGAGGCCACTCCAGTAATTTTGCACTTCATCATGAGAGCAACGTGAAACAAAACTCAGCAGCCTCCTTACTAAAGCTCCTGACTTTGTATTAAAGATAATTTTCATTAAAGCGATGAAGATGAAGACCGGAGTGAAATTAAGAATGTTTGAGCTCATGAGACTGAGTGCTGTAATGGAAATCAACCAATTGGCAGAAGATCGGAGCGTAACAACAAAGACTGAATATTCTTCCAAGAGTACAGGCTGA

mRNA sequence

ATGGAGGCTGGTTTATGGGATAAAGCTATCACTAGTCCATTATGCAATGGCAGCAACCCAATGGATGGTTCGATCAAGGAAGCTCTAGCAAGACTTTTTATGGGTAGAAAGGAGGTGGCAATTGCATTTGTTGGGCAATTTCTAGCTGACATTGATTATTCAATTAAATCTAAGCAAGAGGCCACTCCAATAATTTTCATTAAAGCGATGAAGATGAAGACCGGAGTGAAATTAAGAATGTTTGAGCTCATGAGACTGAGTGCTGTAATGGAAATCAACCAATTGGCAGAAGATCGGAGCGTAACAACAAAGACTGAATATTCTTCCAAGAGTACAGGCTGA

Coding sequence (CDS)

ATGGAGGCTGGTTTATGGGATAAAGCTATCACTAGTCCATTATGCAATGGCAGCAACCCAATGGATGGTTCGATCAAGGAAGCTCTAGCAAGACTTTTTATGGGTAGAAAGGAGGTGGCAATTGCATTTGTTGGGCAATTTCTAGCTGACATTGATTATTCAATTAAATCTAAGCAAGAGGCCACTCCAATAATTTTCATTAAAGCGATGAAGATGAAGACCGGAGTGAAATTAAGAATGTTTGAGCTCATGAGACTGAGTGCTGTAATGGAAATCAACCAATTGGCAGAAGATCGGAGCGTAACAACAAAGACTGAATATTCTTCCAAGAGTACAGGCTGA
Homology
[Close]
BLAST of CSPI04G20250 vs. TrEMBL
Match: A0A0A0L2H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507420 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MEAGLWDKAITSPLCNGSNPMDGSIKEALARLFMGRKEVAIAFVGQFLADIDYSIKSKQE 60
           MEAGLWDKAITSPLCNGSNPMDG IKEALARLFMGRKEVAIAFVGQFLADIDYSIKSKQE
Sbjct: 1   MEAGLWDKAITSPLCNGSNPMDGLIKEALARLFMGRKEVAIAFVGQFLADIDYSIKSKQE 60

Query: 61  ATPIIFIKAMKMKTGVKLRMFELMRLSAVMEINQLAEDRSVTTKTEYSSKSTG 114
           ATPIIFIKAMKMKTGVKLRMFELMRLSAVMEINQLAEDRSV TKTEYSSKSTG
Sbjct: 61  ATPIIFIKAMKMKTGVKLRMFELMRLSAVMEINQLAEDRSV-TKTEYSSKSTG 112

[Close]
BLAST of CSPI04G20250 vs. NCBI nr
Match: gi|700199654|gb|KGN54812.1| (hypothetical protein Csa_4G507420 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-51
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MEAGLWDKAITSPLCNGSNPMDGSIKEALARLFMGRKEVAIAFVGQFLADIDYSIKSKQE 60
           MEAGLWDKAITSPLCNGSNPMDG IKEALARLFMGRKEVAIAFVGQFLADIDYSIKSKQE
Sbjct: 1   MEAGLWDKAITSPLCNGSNPMDGLIKEALARLFMGRKEVAIAFVGQFLADIDYSIKSKQE 60

Query: 61  ATPIIFIKAMKMKTGVKLRMFELMRLSAVMEINQLAEDRSVTTKTEYSSKSTG 114
           ATPIIFIKAMKMKTGVKLRMFELMRLSAVMEINQLAEDRSV TKTEYSSKSTG
Sbjct: 61  ATPIIFIKAMKMKTGVKLRMFELMRLSAVMEINQLAEDRSV-TKTEYSSKSTG 112

The following BLAST results are available for this feature:
BLAST of CSPI04G20250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G20250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2H6_CUCSA1.6e-5198.23Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507420 PE=4 SV=1[more]
BLAST of CSPI04G20250 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G20250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199654|gb|KGN54812.1|2.3e-5198.23hypothetical protein Csa_4G507420 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G20250.1CSPI04G20250.1mRNA