CSPI04G19820 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G19820
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr4 : 17644990 .. 17652345 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGAGCAAAAGGAAAAGCTCTTTGCACGCTTCTCTCTCTCTTCACTTTCTGAATCTTCCGCCATTTCTCCGCATTCAATTCTCTTTGCTTCTCGTAAATAATCACTTCATTTCTTCCATCTCCTACTCTGTTTCTTCTTCGTCTTCTTCATTTTGTTCATGTTTTTCGTCTTTTTCTTCTCAATCATCTCTGTCCTTAACCAAATCCATCTCATTTCAACTTACTTTCTCCCCATAAATTCTGCCTTTCGATTTCCGTTTCCTGCTCCCTTTGACTTATCTTATGGTGATTGAACTCTTGGGTTGTTTTTCATCTTCTCTTAATCCTCAATTTGTCGTCAAATAGAGTTTCTCTATCAAACCATTATTCTGCTCATGCTTTGCTCCCGTTTTTCTCCATGGAAGTTGTTTCTCTCTATCGCCATGCTTTTTCGCTTCCTCTTCATCGCTCCGGTACTTTCTGTTTCTTTATATCTCTCGCCTTATGGTGTTTTTACAATTTTATGTGTTCCTGATTGGTGTATTTCTATTGGATCAAATGTTTAGGTTGTCAAGAACTTGGGCTTTTCAGTACTTCATCTTCTCTGCTGGTAGGCAGTTTGGCCAATCTATTTATCACTTTCGTTTCGTCTACTTGTTTGTTTTCTGTATATTTGTTGGAAACTCTGCACTCTGTTGTGCTTATGATGGAGAGAAGAAAATATTCATGTAATTACGTTTGTCTCAATATTGTAATCATGAATCAAGTAGGGACCTGTTCTCTGGAATGCTTATTGCGGCTAACCTAGTGCAAAATGAACTCTGGTGTTGCTAGTTTACGAATGAATGTTTAAACCATAAAGATCACAAAAAACATCATCTAACTGTGTTTTCTCCGTTGGATCTGGAGCCAAACATCTGGGACATTTTTGTGCCTCTAAGTTCTGAATTGAAGTTTTATCTAGGTTTATGAATTGAAGTATTATCTAGGTTTTAGCACAATTGTCTATAGGACACAAACTTAATTAAGGAAAAAGTGATAAAACAGTGGGGAGATGAGAAATCTCCCACCAAATCCAGAGGAGTTTAAAAAAAAAAACCACAATTTGTATTAAATAAATGAACAATCATAATTTCAAAACTCTTTTGGCGGAGAATACCGAGAAAAACAACTGTCCCAAAAGTCCTAAAAACAACTAGAATCTCCTTGAAAGGTTCTGCGATTATTTTTTAGTCAGCTTCCAAAAGATTTTATAGAGCCTTAAAGATGTTCGCAAAGAAATTCAAGAGGGGCTGAATGGTTGTCTTAGGGAAGCACTGGTAAATGTTGAAAGAGAGACTCTACAACTCTTAAATACGTAAGGGCAATCTAAAGTAAGATAGTTTTAGTCTTCTATAGCTCTGGCACAATGCCATTGCCAGCAGCTGGGAAGTAAAACAAAGTTTGGAAACCTTTTTGAATTCTATGGTAACAAATTAACCAGTCTTGGGCAAGACCTGAAGGAAGAAGTTTCTTTTTTAGGAACTTTAGCGTTCTAAATGTTCCTACCTATGTGGAATTGAGACAACCACGCTCCTTTAAAAGCTTATGCTGGAGGGACTTCCTCGAAAACATTCGTTTCAAGAGCCAAGTTTTGGAATTTGATCACTCAGAAATTGCAGCTCCATTTTTCTGAGTCTCAAGGAATGGATGCACAAGACCAATGAAACTAATCATAATCTTAATGAGTCAAAGAACCTAATCCTAATCGTAGTCAATTAAGGTTTGATTTTTCTTTTCTTCTCTTCTCTCTCTCCCCCTTGGATGAAAACTACAAATGAAGTTATCCTAATTTACTGGAATCCTACTACATCAATAAATATTATACACAAATATCTATAAAATTATTAACTCCAACAGAAAGTTAACACGGTCCTTCGAGAAAAAAAAATGATGTTATCACCTTGAGAGATTCTATACCATTTTTATGAGATATATATATATTTTAAACTTTTGGCAATAGAAGTCTAAGGGCCCTTTAAACTGAAAGTGCCTTTAAGGCGTGCTAACCATTCACAATCTGCTAAAATGTTATCTACTGGTAATAATTTTCCTCCGTAAGGGATGGTTTCATCATGAATCTTCGACCCAGTTTTGTTAGGAGGCTGAAAATGTAACTGCCAAGGGTATTGGGTGGTCTATTGATGAGGGGGCAGGTTGAAAAAAGTAAAGGATCTATGGGGTTATGAGTTCAAACTGTTGGTGGCCACCTATGTTAGAAATTAATATCCTGCAAGTCCTCCTGTTAGAATGGTTTAAACTCTGATCATTCTATAATGTTAGTGTTAGATTGGACTTCTTTAGTTTGTCATCGACTGTGAGGTGGGTAGTTTCCTGTTTTCTTATTTGAGGTTGATGGTTTTTGTTATAATCCCAAAAGAGGGACATTTGGAACCATGTGCATAAGATTAAAAACAGCTATGGTTCCTAAATAGCATTTTCTGTCATGAAGCATGGACACTTTTTTTTGGAGAGTGTCAGTTTCGAACACGTGTCCAACTCTGAAATGCGCTTGACACGCAAAATTTCGTGTATTTTCTTTTTTATTTTTTTAAATTCCGACATGCCTCGACACACACCGACACGTGGGAGGGGACACAAATATTCACTTTTCTCTATCCTCTCGAATATTCAACGTTCGGCCCCTCCCCTCCGACCAGACGACGTCGGAAACCGCCACTCACCCTCTCCGATCAGAAGACGCCGGTGACTTCAACTCCGATCAGACCGTCCGTGCTTGCCCTTCGTTTTGGTTACTTGCTGTCTGGATTTAAAAGCTCTTCCCTTCGTTTTTTTTTTTCTCTCTTTTTTGTGTATCAATGTTTGAGGGTTCCAACTGGTTTGACAGAACACACACACACATATATATCCTTTTTTATTCATTACTTTGTATTAATATGTAGTCCCAATGGAGATGTTGAAATTTATATATGTTGAAATTTATATAAAGTATGGTTTAGGCCATGGGCCTTTGTGGTGCATTTAATTTTTTTTTACTATTTTGTATTTATTTAATGTGGAATTTGTACACATATGGTGTGAGTTTTTGGATGAAAGTGTGAGTTTTTGTGGTGTGAGTTTTTGGATTATTATCTGGAATTTTTGGTATGGTTTAATCAGATTTCAGAGACATGACGTGTCTTTGGAAAGGTGTATCTTGATGTTTTTGGTCTAAGAACATTTTTTTAGTGAATTCATTCTATTTTCTATGCTACACGTCATCTTTCTCCTTGTATACATCTACCCATAATAGTCCATCATCCACGAAACATTTTGTTTTGGATGAAAGTGTGATCTCTATTTAGGATTTTGTATTTGTATCGTAGTTTGGAACTTTTTATTGAAATCAGACAATTAATGTACTCTTTATTTATATTTTAAAGAAGTATTGTTATGTTCTAACATATATGAGTGATCTATCTACAAGTATTATCACATATATTATTTAAAAAGATAAAAAAATTATAACATGTCTTTAACGTGTCATGTCCTACTTTTCTAGAAATTGGCTGTATTGCATGTTGTCACGGGTCGTGTGTTAGTGCCCGTGCCTCCTAGATTTTCTCTAAGGGAAGTAAGTTGACTCTCATCCAATTTGTTCTGTGTGAGATCCCAATTTGCTTTATATCTGTATCTAGAATCCATGTTGCTAGTGGTAGCTTTAACTTTAGAAAAGTTTTTTGTGGGAAGCAGTTCACAAAGGTGGGAGTTGGTCGTTCATTTGGTCAGTGGAGAAAATAGTGTTGAGGTTGGATAATCTAGAAAGCATTTGTAAGTTGAGACTCTGTAAGAAGGCCTTGTTGGCTAAACTTGATGCTCTTTGGCATTGGGTCATTATGAGCAAGTTACAAGTACGGTCCTCATGTTTTGGTGGCTAATCCTCGTGCGTGGGCCATTTTCTGTGGCCTTGTGTGCATGTGATAGAAGTCTATGAACTCCCATCCAGAAAAATTAACTCGTCCTCGAGTTCGACAGACAATCGGAACTCATATGGGACAAAGCAAGGAAAACAAAAAGCTACATTGTGAAAGTATTGCTGATAGTCATAGGTGTAGGAAGATCTTCATGACAGGTCTTGTTTCCAAATTTTTCCAGAATAGGAAATGATCTGAACTTCTTATTGGAATTTTAGAAAAAGAACCAACTTGAAATCTGTTGTGAATTTACACCATCACAAGGCCACCAGGCTGAAAGTAACGTGGTGACTATGAATGTCAACATGAATCTTGTACTTTTTGTTGGAGCAATCAGATTGTTCACAACTTCTTATGAATCTGTTGAATATGATCAACTTGTGGTCAACCTCGGCACTAAGATCAACGTTAGGAGGTAATTTAAGAAGGTCAAATGTAAGATAAGTAGAATAAGTATAGATAACCTCGAATGGACACTTCCCAGTGGATCGATTTTGCATGTTAATTGTTATTATATGTAAATTCAGCTTTTTGAAGGGAAAGATCCCACTTCCTAGGTTGATCCCCGCTTAGGCACTGAGTGAAGAGAGGTTGCCTAATGTTCTATTAATCACTTGTATTTGACCATCTGTTTGAGGATGGCTGGTCGAATAGTACATCAAGTTCGTCTCCAACTTTTCTCAAAAAAACTTTTCTAAAAAAAAGACTCATATATTTAAGATCCCTGTGTCTTGAACTATGTCTCTAAAGTAGATTAGTAATGTTTAAGGCATCTAATGGTTTTTTACAAGGTAAAGTGTGTCAATATAACAAAGATGTTACTATAATAAAATAACCCTAAGATATTACGCTAATTAAATAACCCTAATGTTAGTAAGTATAACAAACACTTTTACTCTCATCTTGTTCTTCCTCAACTTCTTCTTCAACTTCTTCATTGCTTTCTTGAATTGTTAAATTTCGTGTTTGAGGGCAATCAATTGATAGATGACCAACTTGTCCACACCTAAAACATTTACCAAGGTTAGGTCTATTATAAGGATTAGATGATTTATTTGTCAAAACAGCTTGTACTCACTCAATATTCTATGTTCAAGGGAGAGGGTGAGGGTGTTTGTAGAAGCATGGTGAAGGGGCATTGGTAGGATGAAGATGGAGCTAGAGATGCTCCATCGTGGTGTTTTGCACCATTTTTACTCATTATGGTGTTTTGGACCATTTCTACTCATTTATTTGTTTTATTAGAATGTTAATTACCATTTTAATTGCAGATGAATGGGTTTAGGAGTCTTCAATATAGTTCGTCTCTACATCAACAAGCAAATTTGGGAAATGCTGGTAAGTTATTTCTTGCTCAAAAATCTTGTTCTAGTTAATTTCTTCTCCCAAATAACATAGTATAATACTATAACCTAAACCTTTTTTTAGTACTCAATAGTTTCCACTACCTTTTTGTTTATGACTATCTTTTACCAGCATTTAGCTGATAGAACACTAGGAAATGTGTTCTTGTATATTCATAAAACACCCAAACAAACACAAAGAAAACAGCAAATACAGTCTTAACACAGTGCAAACACAGTCTTTAACACAGAAAATTACAACCTAAACACAATCCACAAATCAAGAACAGAAATTCAACAAGACTGAAAATAAAACTACCCAGCCACCAGATACTGAATACTCTGCCTTCCCTGCTCTCCAGGAAACTAGCAGCCCTCGATACCAGAACAAAATAACCCCCCTTCTCTTCCCTTCTTCCTATCCTCTAAACAATCCTGTCATGTAACTAACTGTGGTCCCCACCAAGGTTGTTTCCACTTTTGCCACTTTCTTACTTCTGCGCACATGCCACTTCATTTTTCTTCCTTCTGCTATATTGTATTATGATCGGTGGTCTATCATTACTCTCCTTCTCCAAACACACCTTGTCCTCAAGGTGGAAGTGAGAAACTGCTGCGCAAAATCATCACAATTCTCCCATGTAGCCTCATGAGGTGGCAGTCCTTTCCAGCTAATAAGAACTACCCATTCTTTTGTTGATTTGTTCTTCCGGTAACCAATGCTTCCATTCTTTCAGTCTCTCCCCAAAGAAGCATCTCATATAAGCTTCCACACCTCTATTGACCACCTCCGTTTGTCCATCCGATTGGGGGTGGTAAGCAAAGCTTCTACTTGATTTAGTTCCCTACAGCCTATATATCTCTTTCTAGAAATGGCTCAAATTTTTCTTTGTCACGGTCAGACACAATGGACTTAGGATAGCTGTGTAACTATCTCTTTAACAAAAACCTCAGCAACAGCCTTTGCAGTATGAGGATGTTTCAAGGCTATAAAATGACCATATTTACTCAATCTATCTACAACAATAAGGAAGGTAAGTTCTCTCCCTTCTTCTCTTCCTTTCCGGTAGCCGGTTTCTTCATCAGTCTTTTTTGACAAGTCTCAAAGCAAAACATGGAAGTTGTCAGTTGGGAAATCGACCAGTCCCACTACTGCATTTGGAAAGAGGAAGATAGTTGTTTCATTGAAGATGTGGAAGCCTGTAGAAGCATCTCTATTTCTGTTGGCCAATTCAGATGGACTAAGTCAATAATCTCTGATTTACTCAAAACTCCAGTGGACAATTATTTCAAACAATTTGGGGATATTGGCAGAGGAAGATTGAAAATTTCAAAGTTTCAAGCAAAGTCCGGATGGGTCCTAAGCTGCGATCATTGGCCATATTCAGGGGGTCTTTTCAGTATTAGAGTTTGCTCAGAAAAAAATCAGCAAGGATGGAAGTCGTTTTGCAAGATGCTGGAAAAATTTGTAGAAAAAATGGACTATGTTAGATGGTACTCTGGTAATATATCCAGTTTTCCTTCTCCGCAAATGGTAGAAAAGTTGAGTTATGTTGATAAGGTTAAGTCCAGTAGCTCTAAACTCCCAGTTATAAGGTCTGAAAGACTGGAAGTCAGCCAAGATTTTAGTCAAAAAAGGAAGTTACTAGTGGACAGTCATCCTTCCCCTCCAAAACAGAAGCAGTGGTTGATCAAGAACCATGAACTTGCTAAGGTTAACTTTGAAAACCTTTGGATTATATCAAAATTATTTGCTTAAGATGACTGGAGATTGATTTGTAAGAGGCTGGAAGAATTTTTTGGAATGAAAACTGTAATAAATCCTCTATTTGATGAGAACACCCTCATTGGTATTGATCAAGGATCAATTATTGACTTTATCCGTGAGGAAGGGAAATGGCAAGCTTGGGGGAATTTCCGCCTCAAATTCGAAAGATGGGACGACATCAAACACAGTCGGCCACTTGTTTTAAAAGGCTACGATGGTTGGCTCAAAATAAAAAACCTTCCTCTGGATTATTGGTGTAGAAGCACCTTTGAGGTTATTGGGGATCACTTTGGAGGTCTTATTGACATATAG

mRNA sequence

ATGGAAGTTGTTTCTCTCTATCGCCATGCTTTTTCGCTTCCTCTTCATCGCTCCGGTTGTCAAGAACTTGGGCTTTTCAGTACTTCATCTTCTCTGCTGATGAATGGGTTTAGGAGTCTTCAATATAGTTCGTCTCTACATCAACAAGCAAATTTGGGAAATGCTGAACAGAAATTCAACAAGACTGAAAATAAAACTACCCAGCCACCAGATACTGAATACTCTGCCTTCCCTGCTCTCCAGGAAACTAGCAGCCCTCGATACCAGAACAAAATAACCCCCCTTCTCTTCCCTTCTTCCTATCCTCTAAACAATCCTTCTCTCCCCAAAGAAGCATCTCATATAAGCTTCCACACCTCTATTGACCACCTCCGTTTGTCCATCCGATTGGGGGTGGATAGCTGTGTAACTATCTCTTTAACAAAAACCTCAGCAACAGCCTTTGCACCGGTTTCTTCATCAGTCTTTTTTGACAAGTCTCAAAGCAAAACATGGAAGTTGTCAGTTGGGAAATCGACCAGTCCCACTACTGCATTTGGAAAGAGGAAGATAGTTGTTTCATTGAAGATGTGGAAGCCTGTAGAAGCATCTCTATTTCTAGGAAGATTGAAAATTTCAAAGTTTCAAGCAAAGTCCGGATGGGTCCTAAGCTGCGATCATTGGCCATATTCAGGGGGTCTTTTCAGTATTAGAGTTTGCTCAGAAAAAAATCAGCAAGGATGGAAGTCGTTTTGCAAGATGCTGGAAAAATTTGTAGAAAAAATGGACTATGTTAGATGGTACTCTGGTAATATATCCAGTTTTCCTTCTCCGCAAATGGTAGAAAAGTTGAGTTATGTTGATAAGGTTAAGTCCAGTAGCTCTAAACTCCCAGTTATAAGGTCTGAAAGACTGGAAGTCAGCCAAGATTTTAGTCAAAAAAGGAAGTTACTAGTGGACAGTCATCCTTCCCCTCCAAAACAGAAGCAGTGGTTGATCAAGAACCATGAACTTGCTAAGAGGCTGGAAGAATTTTTTGGAATGAAAACTGTAATAAATCCTCTATTTGATGAGAACACCCTCATTGGTATTGATCAAGGATCAATTATTGACTTTATCCGTGAGGAAGGGAAATGGCAAGCTTGGGGGAATTTCCGCCTCAAATTCGAAAGATGGGACGACATCAAACACAGTCGGCCACTTGTTTTAAAAGGCTACGATGGTTGGCTCAAAATAAAAAACCTTCCTCTGGATTATTGGTGTAGAAGCACCTTTGAGGTTATTGGGGATCACTTTGGAGGTCTTATTGACATATAG

Coding sequence (CDS)

ATGGAAGTTGTTTCTCTCTATCGCCATGCTTTTTCGCTTCCTCTTCATCGCTCCGGTTGTCAAGAACTTGGGCTTTTCAGTACTTCATCTTCTCTGCTGATGAATGGGTTTAGGAGTCTTCAATATAGTTCGTCTCTACATCAACAAGCAAATTTGGGAAATGCTGAACAGAAATTCAACAAGACTGAAAATAAAACTACCCAGCCACCAGATACTGAATACTCTGCCTTCCCTGCTCTCCAGGAAACTAGCAGCCCTCGATACCAGAACAAAATAACCCCCCTTCTCTTCCCTTCTTCCTATCCTCTAAACAATCCTTCTCTCCCCAAAGAAGCATCTCATATAAGCTTCCACACCTCTATTGACCACCTCCGTTTGTCCATCCGATTGGGGGTGGATAGCTGTGTAACTATCTCTTTAACAAAAACCTCAGCAACAGCCTTTGCACCGGTTTCTTCATCAGTCTTTTTTGACAAGTCTCAAAGCAAAACATGGAAGTTGTCAGTTGGGAAATCGACCAGTCCCACTACTGCATTTGGAAAGAGGAAGATAGTTGTTTCATTGAAGATGTGGAAGCCTGTAGAAGCATCTCTATTTCTAGGAAGATTGAAAATTTCAAAGTTTCAAGCAAAGTCCGGATGGGTCCTAAGCTGCGATCATTGGCCATATTCAGGGGGTCTTTTCAGTATTAGAGTTTGCTCAGAAAAAAATCAGCAAGGATGGAAGTCGTTTTGCAAGATGCTGGAAAAATTTGTAGAAAAAATGGACTATGTTAGATGGTACTCTGGTAATATATCCAGTTTTCCTTCTCCGCAAATGGTAGAAAAGTTGAGTTATGTTGATAAGGTTAAGTCCAGTAGCTCTAAACTCCCAGTTATAAGGTCTGAAAGACTGGAAGTCAGCCAAGATTTTAGTCAAAAAAGGAAGTTACTAGTGGACAGTCATCCTTCCCCTCCAAAACAGAAGCAGTGGTTGATCAAGAACCATGAACTTGCTAAGAGGCTGGAAGAATTTTTTGGAATGAAAACTGTAATAAATCCTCTATTTGATGAGAACACCCTCATTGGTATTGATCAAGGATCAATTATTGACTTTATCCGTGAGGAAGGGAAATGGCAAGCTTGGGGGAATTTCCGCCTCAAATTCGAAAGATGGGACGACATCAAACACAGTCGGCCACTTGTTTTAAAAGGCTACGATGGTTGGCTCAAAATAAAAAACCTTCCTCTGGATTATTGGTGTAGAAGCACCTTTGAGGTTATTGGGGATCACTTTGGAGGTCTTATTGACATATAG

Homology

[Close]

BLAST of CSPI04G19820 vs. TrEMBL
Match: A0A0A0KZ25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G471190 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 8.6e-21
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAEQKF 60
          MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNA + F
Sbjct: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAGKLF 59

[Close]

BLAST of CSPI04G19820 vs. TrEMBL
Match: A0A0A0KNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-10
Identity = 31/103 (30.10%), Postives = 58/103 (56.31%), Query Frame = 1


Query: 330 ELAKRLEEFFGMKTVINPLFD-ENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDI 389
           ++ ++L+E      +   LF  E  ++ +++ ++++ + +   W   G F +KFE W+  
Sbjct: 187 KIMEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAWNIS 246

Query: 390 KHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI 432
           KH+ P VL  Y GW+K K +PL  W  S+F  IG+  GG +++
Sbjct: 247 KHATPKVLSSYVGWVKFKGIPLHAWNYSSFYQIGEVCGGFVEV 289

[Close]

BLAST of CSPI04G19820 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-07
Identity = 28/102 (27.45%), Postives = 46/102 (45.10%), Query Frame = 1


Query: 330 ELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIK 389
           ++ ++L E         P      LI        + I +   W   G F +KFE W+   
Sbjct: 145 KIVEKLNEQLDTTVSYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKD 204

Query: 390 HSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI 432
           H+ P  +  Y GW+K++ +PL  W   +F  IGD  GG +++
Sbjct: 205 HASPKFVPSYGGWIKVRAVPLHAWNLESFVQIGDACGGFMEV 246

[Close]

BLAST of CSPI04G19820 vs. TrEMBL
Match: W9RAT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025093 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.0e-06
Identity = 46/208 (22.12%), Postives = 91/208 (43.75%), Query Frame = 1


Query: 225 GGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVK 284
           G + ++ +  E+N++GW+   + LE F  K       S N          + L   D  +
Sbjct: 99  GEVKNVIIPGEENKKGWRDLSRCLENFFCKKSQT---SKN----------KTLMRKDFTR 158

Query: 285 SSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPPKQKQWLIKNH-ELAKRLEEFFGMKT 344
           +++    +     L+V ++   +R ++          + W+ +   E++K L E    K 
Sbjct: 159 AAAKHQGI-----LDVREEKRWERAVVA--------YRDWMEEGWTEISKGLSEKLERKV 218

Query: 345 VINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWL 404
            ++PLF +  ++        D + +EG         +  +RW    H + + ++G   W+
Sbjct: 219 RVSPLFADRAILWCQSDYERDTLVKEGSVHIRNQHAITIKRWCIETHWKNVKIEGRASWI 278

Query: 405 KIKNLPLDYWCRSTFEVIGDHFGGLIDI 432
            I+ LPL  W   TF VIG+  GGL+++
Sbjct: 279 GIEVLPLHMWNSHTFNVIGNKLGGLLNM 280

[Close]

BLAST of CSPI04G19820 vs. NCBI nr
Match: gi|778694861|ref|XP_011653882.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 5.5e-21
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAEQKF 60
          MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNA Q +
Sbjct: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAAQHY 59

[Close]

BLAST of CSPI04G19820 vs. NCBI nr
Match: gi|700199610|gb|KGN54768.1| (hypothetical protein Csa_4G471190 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAEQKF 60
          MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNA + F
Sbjct: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAGKLF 59

[Close]

BLAST of CSPI04G19820 vs. NCBI nr
Match: gi|659083074|ref|XP_008442171.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 97.8 bits (242), Expect = 4.8e-17
Identity = 50/59 (84.75%), Postives = 52/59 (88.14%), Query Frame = 1


Query: 1  MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAEQKF 60
          ME+VSLY HAFSLPLHRSG QELGLF TSSSLLMNGFRSLQYSSSLHQQA LGN  Q +
Sbjct: 1  MEIVSLYHHAFSLPLHRSGYQELGLFGTSSSLLMNGFRSLQYSSSLHQQAYLGNTAQYY 59

[Close]

BLAST of CSPI04G19820 vs. NCBI nr
Match: gi|700195958|gb|KGN51135.1| (hypothetical protein Csa_5G465580 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 4.4e-10
Identity = 31/103 (30.10%), Postives = 58/103 (56.31%), Query Frame = 1


Query: 330 ELAKRLEEFFGMKTVINPLFD-ENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDI 389
           ++ ++L+E      +   LF  E  ++ +++ ++++ + +   W   G F +KFE W+  
Sbjct: 187 KIMEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAWNIS 246

Query: 390 KHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI 432
           KH+ P VL  Y GW+K K +PL  W  S+F  IG+  GG +++
Sbjct: 247 KHATPKVLSSYVGWVKFKGIPLHAWNYSSFYQIGEVCGGFVEV 289

[Close]

BLAST of CSPI04G19820 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-07
Identity = 28/102 (27.45%), Postives = 46/102 (45.10%), Query Frame = 1


Query: 330 ELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIK 389
           ++ ++L E         P      LI        + I +   W   G F +KFE W+   
Sbjct: 145 KIVEKLNEQLDTTVSYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKD 204

Query: 390 HSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI 432
           H+ P  +  Y GW+K++ +PL  W   +F  IGD  GG +++
Sbjct: 205 HASPKFVPSYGGWIKVRAVPLHAWNLESFVQIGDACGGFMEV 246

The following BLAST results are available for this feature:

BLAST of CSPI04G19820 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G19820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ25_CUCSA	8.6e-21	94.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G471190 PE=4 SV=1	[more]
A0A0A0KNC5_CUCSA	3.1e-10	30.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1	[more]
E5GB30_CUCME	1.9e-07	27.45	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
W9RAT1_9ROSA	6.0e-06	22.12	Uncharacterized protein OS=Morus notabilis GN=L484_025093 PE=4 SV=1	[more]

BLAST of CSPI04G19820 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI04G19820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694861\|ref\|XP_011653882.1\|	5.5e-21	94.92	PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like ...	[more]
gi\|700199610\|gb\|KGN54768.1\|	1.2e-20	94.92	hypothetical protein Csa_4G471190 [Cucumis sativus]	[more]
gi\|659083074\|ref\|XP_008442171.1\|	4.8e-17	84.75	PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isofo...	[more]
gi\|700195958\|gb\|KGN51135.1\|	4.4e-10	30.10	hypothetical protein Csa_5G465580 [Cucumis sativus]	[more]
gi\|307135793\|gb\|ADN33672.1\|	2.7e-07	27.45	hypothetical protein [Cucumis melo subsp. melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G19820.1	CSPI04G19820.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G19820	Csa4G471190	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G19820	Lsi01G019800	Bottle gourd (USVL1VR-Ls)	cpilsiB250
CSPI04G19820	MELO3C008959.2	Melon (DHL92) v3.6.1	cpimedB318
CSPI04G19820	CsaV3_4G030910	Cucumber (Chinese Long) v3	cpicucB222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G19820	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G19820	Cucumber (Chinese Long) v3	cpicucB214
CSPI04G19820	Watermelon (97103) v2	cpiwmbB300
CSPI04G19820	Watermelon (97103) v2	cpiwmbB312
CSPI04G19820	Wax gourd	cpiwgoB396
CSPI04G19820	Wax gourd	cpiwgoB403
CSPI04G19820	Cucumber (Gy14) v1	cgycpiB413
CSPI04G19820	Cucurbita maxima (Rimu)	cmacpiB673
CSPI04G19820	Cucurbita maxima (Rimu)	cmacpiB879
CSPI04G19820	Cucurbita moschata (Rifu)	cmocpiB667
CSPI04G19820	Cucurbita moschata (Rifu)	cmocpiB859
CSPI04G19820	Melon (DHL92) v3.5.1	cpimeB324
CSPI04G19820	Melon (DHL92) v3.5.1	cpimeB334
CSPI04G19820	Watermelon (Charleston Gray)	cpiwcgB309
CSPI04G19820	Watermelon (Charleston Gray)	cpiwcgB322
CSPI04G19820	Watermelon (97103) v1	cpiwmB339
CSPI04G19820	Watermelon (97103) v1	cpiwmB348
CSPI04G19820	Cucurbita pepo (Zucchini)	cpecpiB067
CSPI04G19820	Cucurbita pepo (Zucchini)	cpecpiB501
CSPI04G19820	Bottle gourd (USVL1VR-Ls)	cpilsiB249
CSPI04G19820	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G19820	Cucumber (Gy14) v2	cgybcpiB176
CSPI04G19820	Silver-seed gourd	carcpiB0316
CSPI04G19820	Silver-seed gourd	carcpiB0552