CSPI04G19440 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G19440
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Protein FRIGIDA, putative
Location	Chr4 : 17211972 .. 17222259 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTTTATCCCTTGTTTCTTACCTTCCTCCCTCAAGGTTTAGAAGTTTAAGATTAATTTTGGTTGTTCTAGGTTACTTTGAATAGTTTTCCCAATTTCCGTTTCTTAATCTTTCATCTCTTCTCCCCAATCTTGTGCAGTTCTCTGTTCCCCGGCGCCCAATTCTTATTTTTCTTCCCTCAGTGCCTTAGAAGTCCACATATTAAATTAGCAGTTTTGGAATTTAATTGCCAAAAACTGGGCTTTAGTTTACCTTTCTAAACTTCAACCTCTTCAAATTCAGTTGCCGTTTTCCCCCACAACCCAGAAGCTTAAGTAAGAGGTCCTTAAGCCCAAGGAAGTCAATGTCACTCATGGCTGCTACTGTTGATTCCTCCAAGGAGGAAGAGCATTCAGAGACTGATTCACGATTGGGGGAAGGCCCATGCCAATTATCTTCCTTATTCTCCAATTCTTCTCCTCTCGTCCCAACCGCAGAAAGTGGACGAAATCCTGTTTATTCAAGCACCCATCTGTCGCGTAGTTCTAGAAGCAATCTTCCTGAAACTCGTACCGATTTTGGCAAAGTTGACGGAAAAGACGGCGTTGATAAGCAACCAGAATCCTCCTCTCTCTCCCAGCTTGAGCATCTCTGCCGAACCATGTGTAGCCGTGGCCTACGCAAGTACATAGTTTCTCATCTATCGGACCTCGCTAGCCTCCATCATGAAATTCCGCTTGCTTTAAAATGGGCTCCTAACCCGGCCAAACTCGTGTTCGATTGCATTGGCCGCTTTTATCTTCAGGGAAGCAAAGCCTACACCAAGGTCTCTCCTATGATTCCTGCTAGACAAGCCTCCATCCTCATCCTAGAACTTTTTCTGATCTCAGGTGCAGCTGAGACCAAAAATGATAAAAGAACAGAAATTGAGTCCTCCTTGAAGGTGGAAGCTGACCTTGCTGCTATTGCCTGGAGAAAAAGACTTATTACTGAAAGTGGTTCTTGTCAGGCAAGCGATATAGATGCCAGGGGTTTGCTTCTTTTTCTTGCGTCTTTCGGAATTCCTACTGTATTTACAAACGATGATTTAAGGGATCTCTTACGATCGAGTAACTCAAAGGGGCTATCGAATGCCCTTTGCCATTCACATTGTCTTCGTACGCGTATTCCTGGTATGTAATTTCAACACTCATGACTTATCAAAAGAACACATGCTTTTCCCTTGTTGTTCATCTCTTAATTGATTCGTTTACCTGATTTATTGCCTTGCTTAAAAACTGAATTTGCTTCCTTTTTTTTCTAACTGTTTTACTTTGTGGTCTTGTTTATATCTGATTTTAGTTTTGTTCAATTTTGCTGCTATTGTGTCTGATATGTTAGTAAGTTTTAGACTACTTCCTTACTCCTTATATAAAATGTCTTTGATGAGTGTTTTTCGGCCATCTCTTGGGCTCCTCCCAAGTTTGTAAAACCTTATCCAGCTAATTGCTAGGATTGGGAGAATGGTAAAACTGGTTTGGAAGCTTGGTGTAGAGCTATTAGTTTGTGACTCTGTATGTTTGATTGGGTATGGATGGGGACTGTTTTTAATGAATTGTATAGATGTCATCATTTTTATTTTTGATGAATAACTGACCACATGTATGCTAAGAAGCACGGATATGGATACAAGACGTGACACAACATGCACACAAAAACACATCATTTTTTTTAATCTACACGTGTATCAAAATATATATCAACTTTATACTAGGAGTCTAGAAGTCTACAAGCCTAGAAAGAAGTTTATGGTTAATGAATTTATGCATTTATGTACTTAAAAAATTAGTTTATTGTATTTTTTTCCTCAAAATTTATTATGTTTGTCATATGTGTCCGGTTAATTTACTTAGGGTATGTTTAGGAGTGATACTTGGAGTAGTGATTTTAGAAGAAGAGATTTATATACAATTGATTTTGGAAAAGTGATTTTTAACAACAAACTTTTCTTTGGTTCCAAACTTTTGATAGTGATTTTGAATTACTATATGTTTGGTTCCAAAAGTGATTTTAAAATTACCAAATTATATTTTATATTTGAAAATTAATTATAATAATATATTTTTTATGAATTTATTTTTACATTTGGTTTTTAAAAATGTTTTTATAAAAAAGTTGGCCACCAACGGTTGCTGAAAACTGTCATTGGAAACGTTGGCCGGTGGTGTTCACTTAAAAGTGGTGATTAGAGGTTGGCAGTGGTCACCAAAGTTGGCGAATGATGTTCACTAAAACACGGTCGTTGAGAGTTTGGCGGAAACGGTTGTCGGGAATATGATCACCCGAAGTTGTTGTCAACGATCACCTGAAAACAACCGTCAAAGATAGTGGTTAGAGGTGGTCATCGAGAAATGGTGGTTGGACACTACTGACAACGATCGCCAAAAGATCGTCATTGGAAGTTGGCTAAGGACGTTGTCGAAAAATGATCACTTGAGGTTGGCTGGTAACGGCTAACGGGAAAATAGTCACTTGAAGTTGGTCGTCGATCATTGTTGGGAAACAGTTGGCAAAAACATGGTCAAAAGTTGTTTGATGAATGTTGCCAAAAAATGATTTAAAAAAATTGGTTGATGGTGGCTATGAAAAAAGGATTGTCGACGACTGGGTGGCGATAGTTGTCGAGAAAATGGTCGGTTGAAGGTTGCTGTTGTCGGGTTGCCCGAAAATAGTTGTTGAAAATTGTAGTTAGAGGTGGCCTATGACTATGAACAAAGGCACGAGGAGCAAACTTAGTGTGGTTAGGCCCATGATTATGAACAAAGGCAGTCCACCCGAACACATGGAGAGGAACATCAAGAATAAGTCGTGTGATAAGTTAGAACTCCTTAAGACATTCAAGAGGTGCTTGGAGGTGGAGGACCCAAGATGACATTCTAGTGATAAGGTACATTGTAGTGAGGATTACCTCCCTCATAAGTAGTAAGGAAGAGAAGTAGACAACATGAGAGACAAAGCAACCTCGAGGAGGTGGCATTTTTTCCTTTCAACCACATCGTCCTGTTGCGGGTTATAGGCACAAGAACTCTGGTGCACAATCCCTTCAAAGAATAGAAAGTATCGAAAAGTATTATTCAAGAACACATGACCGTTATCACTCAGCAAAATAGCAATTTTGGCATTGAATGGTGTCTCAATGGTTGTGTAAAATTGTTGAAATATTGACGAGACCTCAAATTTATCAGTGAGAAGTGAGTTGAGGCGTATATGATCATCAATAAATGTTACAAACCAACGTTTTCCCGAAGTGGTAGTGACTTGTGAGGTCCATAAAACATCACTACAAATGAGGGTAAATGGTTGGGTAGGTTTGTAGGTCTGAGATGGAAATGAGGCTCTGTGCTGTTTTGCACGAATATACATCACATGACAAAGAAGAAATATCCACTTTAGAAAATAAATGACGAAATCGATATTTTATATATTGAAAGTTTGGGTGGCAAAGACGAAAGTGCCACAACATAAGGAAAAAAGTTTCAGAAGAAAAATAAGATGAGTATGGACTAGTCCTATTACAATCCCTAGAAGAAGCATCATCATCAAGGAAATAGAGTCCCTTGTTGTGTCGGATAATGCCAATCATCTTCTCTGAGTTGAGGTCCTGAAAAGAAACAACAATATCAAGTGAGAATACAGCTTGACAATTTAGATCCCTAGTTATCTTACTAATAGACGGTAAATTGTGAGACATCGTAGGCACATACGATGCATTATGTGAAATTGGACCATCAAAAGGGGATGGGGAAATATGACCCTTGCTCACAATAGGAGCAAAGGACCCATCTGCAATCCTAATTCTTTCATTGCCAACACATGGGAGATATGATATAAAATGTTAAGAGGATCCAGTTAAATGATATGTAACACCTGAATCAAGTATCCAAGGTTTCTTCCGGTCGATGCTGATGAGACTTAAGGATTGAGATGTACCTGATTGTGCAATAGGTTCAAGAGAAGAAGTACCATGATCACCTTGATCCCCTGCAGGGGTGGGGGGCTGTGAAGTTATGATAGATTCACTTGTCATTTGGCGGACGTTTCTTACCATTTGATGGTCGACCATATAACCTCCAACAACTGTCTTTTGTATGCCAAGGATTCTTACAATGTTCACACATAGGGCAAGCTCCCCATTTTGCTTTCCACTGTTAGAACTAGAGGACTTCACACTAAAGATTGCAGAATCAGCACTAGAAACAGTCATGATGTTCATTTTTTCCAAAAGGGGAACAAATGTTTTTTATTAGACAAAAATGAGACTTAAGCTCATAAAGTGTTATACAATGAGCAAAATAACCCAAGGATTAGGAGGTGCACTTGCTGGTTATCTCAATTAGGTTAACACCCTATGACGCCCTCATCATATCAAAAATAACTAATAACAAGCATGACTAAAAGGACCAAACAAACCGTCTTTACAACATAAGATTGTAATACAGGGAAATCAAAGAGAGAATCCTTGATAAAACAAAAATCTACTGAAACTGTTAAGGGGCTATCAAAAAGCAAGCAAGACGACCAATCTACACTAATTCATGGTTAAACTTGGGGGATAACTTCACATCTATCACTTTTTGAACTTTTTGAATTTGATAGTTGGGTAAAAATTAATGAAGCATTAGAACTCTTTTTCGATTCAAAAGTTATCATCAACCCTTTATTTGCAGACAATGCTTTGATTGAATTGGATCGTGGTCCTTTGAAGGAGTTCATTGAAAGTCCAGGCAAATGGCAATGTTTTGGTGCCTTTCATTTATAAAATCCACTTCCTCTAAAAACAGCCACCCCCATTTAGCAAGAAAGGCTAGACTTTTTTGGTTTAAGAACTTGTACGGTTAAAAAATGCATATTAACAAATTTTCCAAAAGGAGCCAACGACCACAATCTTCTTTTCGATTTATCTCCTAGCCCCCCTTGTAATCCACGAAAGAATTTTAATTGCACTACCTCATCCAAGACTACTTTTAACTGCTGGAAATAAAGTTCATAAAACTCAAAAGAAAGATAAACCACAAGCTTCAATGATGCCGTTCAAATGCTGTGGGATTTATTCTCTGATTTTCTGGATAGGTGGTTCTTTTTATACACATTCCTCCACAAACAACTCACGGGTATTGCTGATAATGTTCTCCAAAATCTCAGAATCTTCAGCTTCTTCCCCTGCTTCAACCTCTTCTAATTCCTCACTACTTACACTTACAACTGATTCAACATCTGAGTCTTGAATTCCTTGAACATCAGGACTTCGAGCTTCCTCTGGAGTACCATTCCCAATTTGCTTCAAAAATTCAAAATCAAGTTTATGCATGCCTTAGAAATGATGGACTTTTCCCTCAAAATTTATTAATCTTGTTTCACATTGCCCTTGAGCCCAACCATCAGGACATCAATTTGGTTCATTTGGAAAGAAAGAAGCTATCAAATGATTAATGAAAAGAACAAAACTTTTGATAGTTCAAATCTTTGCTTTTCTGCCCTCACCTAGTGTGAAAACTTTCTTCAACTTCAGAGTTACAGCCTGCTTTCTCATTTGTCTAGTTGGAGGTGTTCTTTGTAAATCTGCCTTGGATTGGGGATTGACTTTTCTCCCCATTAACATTTTGTAATTCCACCTCATCAGTTGTTGTTTCCTATAAAAAAAATAATAAATAATAACCTCAAGGTCACAGCTCTACAACCTATAGAAGGAATCCAGTTCATGAAGGTTAGAAGCGAGTCAACTTTAAATTTTATTTTTTTCACAATTAAGAATTCTACTTTCAGGTATTTTAATGCTGATAAATGCATAAACGGTAACAAATATTTCAATTTCCTTAATAGCTGTAAGTTGGTTGGTCAACCTTGGAGTCTGATTGCTTTGATTGCCTATGCTGGTTTAGATCAATTGTCATTCTTATTTCGCTGCTTGACTTATAATAGACATTATAAAGGGGATGACGAAGAGCAGTAAGAATATTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGAATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATAAAGTACGAGGTTCAACCATGCAACTGGTATAGTTTATCTCGACCTATGGGCATTTATTTAGTCTTTATAAATTACAATGCATGCATTCATTCTTTTATTTTGCTTTAATATAACATTTCATTGATTTGTGAAAAGTTAAAATATCAGGACTAATTTCCTAACTTTCAATCGTAATACCAGCAACCCATCAGTTCTAATACCTTCACTAATCAAACCTGCATATGAAGAAAGAGTTATGAAAATGTTTGGAAAGAGTATACCAAGAAGCTCTTTCTGTCATAAGTTGGGATTGCATTCTTTCAGGGGGTGTTTGGGGAAAGAGTTGGTTAATATATTCCTTGGTTATTATAGTTGGGTTATAATAGTTTTGGGTTGACCTAGTGATAAAAAGGATAACCAAGGGTCTGTTTGGTAGAGAACCTAGATTGTGTTTTATGTTTTCTAGATTCACTGAGTTCAGCAGACATGTGTTTGACAAACAATCCAGATTCTGTTTTTGAAAACTATTTTCGAACTCTGCTATTAGTGCAAATTTTGAAAACAACTTTTTTATGTTTTCATTGTACCTAGAATTTAAATTTTACATTTTAAAAAGCAGAATTATATTGAATACATATAAGTATATTTAGAAATACAATGTGCCATGTTATAAACTCAATTTATTTTTTAATATAATATGTATTATGTAATGTGTGATAAATTATATAATATTACAAAATAATAACTATATAAATTTTTAGGTTAAATTACAAATTTGGTTACTATGGTTTTAAAAATATAGAATTTAATCACTACGGTTTATAATTAGAATTTAGTTTCTTTGTTGTGATAAACGTCTCGTTTGTAGGGACTATTTAGGAAGATTTTCAAACCATAAAAACTATATATGAGATTTTGTCAAACTATAGACTAAACTCTAACTTTCTCCAAACCATAGGGACTAATTTTGCAATTTAATCTATTTTCTAAACATAAATTATATTCATAAATAAATTAATAATAGCTTATTGTCAACTAAATATTAGTGGATAAGTAAGACTATTTTTATTATTTATAAATATACAATACGAAACATATTTAAACATTTTTTTAAAAGTTAGAATCCAATTTCTGAATCTGTCACCAAACACATAAAATACAACTTTGTTTTCATTAAATCTCTTGTTTTCAAAACTTTTGTATTCATATTCTGTATCAAATAGGCCCTAAGAGGTCAAGGGTTTAATCTATGGTGGCTACCTATCTAGGAATTTTCTACAAGTTCCTTGATATTCAAGTGTTGTAGGGTCAAGTAGGTTGTAGAAAAAACAAGTTTGCATTTGAGGTATAGATTATTTTAGCTTGGGTTATAATACTATGTGTTTGAGATGTAAAATATTTTAGTTCGAGAAGGAAATGATAAACAAGGTAGCATAGAATAAAAAAAATGAACGTAAAATAGTACAAGTTGTAGCAAATAGTAAAAACTGTAGCAAGTTGAAGTTTAAAAATAGGGTTAATTGTAGCTAATTTGGGAGTATAAAAAAGTATTTACAGTAGTAATTAGTGGTTATTATAGTGTTAAGATAGTCTTTGCTCCAAACGCTTTCTTAGTTTCTCTGAAGATGTTTCCATTAATTTAATTTGCTATTCATTTAATTTGTAATGTTCTCCTTTCAAAGTTTTATGCTTCCCATCCAGACAAATGAAAGAACAAAAATAAAACAGTAATACTATTACGTATATAGGATTTTTTGGGGTTAAATTATATATTTCATAGGCTGTTTTGGTTAGTGTTTATCGTAAGCCTAAGGAGTATGTGGGTTGAATTGTATTTGAGCTTTATTGGTTTTGAATTTTTTGTTTTGGTTAATTTTCTTTAGTTATTTTCTTCATTTGTTAGATGTAACTCATTATAATCTTCACAATTTTTTCTTTGGGTGGGTGGGGGTGGGGATAAAGTAATTTTCACAAGTTCTAATTATTCAACCTAATCAAAGTATTGGAGAAGAATTTCTTTGTTCTAAAAAAAACAAAAAGGTTGAACAATCGGACAAGCCGAGCGCCTAGGTCACCTTTGAACGAATGTTCAAGGCTATTGGAAAGTGTAAAAGGCAAGCACCTTGCTAAAGGTGCATTTTGAGTACTTGCAAGGTGTTAAGACCTTGCCTTGCCTCTCACCTCAGGCGAGCACCTGTCTGCGCCTCAACAACCCTGGTTTTGGTCTGGATTTCTTTTTAATCAAATAAACAATAATGAAAGCAAATAATATACGTAGTTTTCTTTTTAAACAGAAACTTATCTTTTCATTGAAGTAATGAACTCGTGACCAACCAAACCAATTGAAAACATTGGGTATTGTGTATAACAAATACAAGTCTATCCATCTACGTGGAAAGAGGCTCCTTCGAGCTTTTTAATCCCATGTCATTTACATCTTTTCCTTAGTTCACTTGCCCAATCAAGGGGGAAAACCTCATTTTTTATCAGAAAAAATCCAACTAAGAGGCTTGTTTTCATTTTAAAAAAACATATTAGCCAATGTTTGAAGATAATCTTTTGTACCATATCCACATTTGATTTTTTAGAGCTGGGAGTCTAATGAAAAGTTCAATTGAAAATTTCAAAAGTTTATGGACGAGATTAGAATAAATGCATAGTTAGTAGGTGAAATTTGGAATTTGGAGAGGGTTTTCCAAACCCTTGAAGTAGTCAGAAAATTAAGATTAGAATAAATGCATATTTTGTTTTATTTATTTTGGAATAAATGCATATTCTATTGCATCTATTTTTAATTCTCTCAATTTGAGGTTATGTTTAGTTTTTGTTGTCAAGCCCTCCCCATTCGTTAGTTTTGCTCAGTGAATTTACTTATGTTCCCTGAGGTTTCTCTCAGCAAGTTCTGCTCCAACATCTTTTATTTGTTCTTCTCCCGTATTGTAATTACTTACCTTCTAGTTACGTTGTTTTTGACAGAGACGAGTGAGTGAAGAGAAATTAGCTTCTCTGAAATGTGTTCTCAAATGTTTGGAAGATCACAAATTGGATCCAGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAGAACTTGGAGAAGGATATTGTGGAACTCGGAAAAAGAATGGAAGATAATGCGAGTCTGAAGAGAAAAACAGATGAAGCTTCCACACAGAAGTATCTGAGTCAAGAAATAAAGCGGTCACGAATGTCCGCAAATAAAGGAGGATTCCCTGTTATGTCTTATCCAGTCAATGGCTTGTTGGAACAAAATGCAACTACGTTTTTGGAGGACAAGAGCTGTTTTAGTACTAGTAGTAGTTCAATGCCACTAAAGTTATTGGATGGTGGACGTGCTTCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGGTTGAAACTACAGTTTTGCCTGCCGATATTATTGGTAGTGGTATCTCCAATGCTGCTGCCCCATTCCCCAGAGGAATGGGATGGGGAAGGGGAAGGGACAGCAACGAGGCGTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTACAAAGATATATCAGTTGGGCAAAGCTTTATTCAACAAGCTATGCCTACACTTGCAACAACCCCTACGCCACCGCCAACAACCGTGGAGCCTTATTCAGCCGTATATGGGTTCATGGGACACTCGACGAGCAATAATTTTGATCTCTATCATTTTGCTGATGCAGCAGTGTTCGAAAATGATCTGCCCAAGAACAGAAGCACTCAAACTGGCACTTTGTCTCGTCTTCGGCTGCCCCATCATCACCATCCCTCCTACTTTTACAATTAATACTAAACGTTTTCATTTCAATATATAATGAAAACAGCTGGGTCGACTTCATCTTTTGGTTAGGATTGTTGAAACACAGTTTCTTGTCTCAGCTGCAAAGCCTTGGGTGTATTAAGTCATTAGATTTGCTAGGCAGGCTGGCTGGCAGAATGTTCTTTGCTCACTTATGCATATGAACTTACATTTTGGTTATAACAATGCTCTTCACTCTTCCTGTTCAAAACCACTCTTTATTTATGGGTTGTTACAGTCACATCCTTGTATTTAATAATTTGATCATCAACCCCTCGAGATTCTAAATTGATGTTATTAAACTCTTAAATATTGCAAAATGGTGTACCAAGAGAAACCCTTTGTAAAGGTGTTAAGAGTGAGTTAATTAAAACAGAT

mRNA sequence

ATGTCACTCATGGCTGCTACTGTTGATTCCTCCAAGGAGGAAGAGCATTCAGAGACTGATTCACGATTGGGGGAAGGCCCATGCCAATTATCTTCCTTATTCTCCAATTCTTCTCCTCTCGTCCCAACCGCAGAAAGTGGACGAAATCCTGTTTATTCAAGCACCCATCTGTCGCGTAGTTCTAGAAGCAATCTTCCTGAAACTCGTACCGATTTTGGCAAAGTTGACGGAAAAGACGGCGTTGATAAGCAACCAGAATCCTCCTCTCTCTCCCAGCTTGAGCATCTCTGCCGAACCATGTGTAGCCGTGGCCTACGCAAGTACATAGTTTCTCATCTATCGGACCTCGCTAGCCTCCATCATGAAATTCCGCTTGCTTTAAAATGGGCTCCTAACCCGGCCAAACTCGTGTTCGATTGCATTGGCCGCTTTTATCTTCAGGGAAGCAAAGCCTACACCAAGGTCTCTCCTATGATTCCTGCTAGACAAGCCTCCATCCTCATCCTAGAACTTTTTCTGATCTCAGGTGCAGCTGAGACCAAAAATGATAAAAGAACAGAAATTGAGTCCTCCTTGAAGGTGGAAGCTGACCTTGCTGCTATTGCCTGGAGAAAAAGACTTATTACTGAAAGTGGTTCTTGTCAGGCAAGCGATATAGATGCCAGGGGTTTGCTTCTTTTTCTTGCGTCTTTCGGAATTCCTACTGTATTTACAAACGATGATTTAAGGGATCTCTTACGATCGAGTAACTCAAAGGGGCTATCGAATGCCCTTTGCCATTCACATTGTCTTCGTACGCGTATTCCTGACATTATAAAGGGGATGACGAAGAGCAGTAAGAATATTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGAATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATAAAGTACGAGGTTCAACCATGCAACTGAGACGAGTGAGTGAAGAGAAATTAGCTTCTCTGAAATGTGTTCTCAAATGTTTGGAAGATCACAAATTGGATCCAGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAGAACTTGGAGAAGGATATTGTGGAACTCGGAAAAAGAATGGAAGATAATGCGAGTCTGAAGAGAAAAACAGATGAAGCTTCCACACAGAAGTATCTGAGTCAAGAAATAAAGCGGTCACGAATGTCCGCAAATAAAGGAGGATTCCCTGTTATGTCTTATCCAGTCAATGGCTTGTTGGAACAAAATGCAACTACGTTTTTGGAGGACAAGAGCTGTTTTAGTACTAGTAGTAGTTCAATGCCACTAAAGTTATTGGATGGTGGACGTGCTTCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGGTTGAAACTACAGTTTTGCCTGCCGATATTATTGGTAGTGGTATCTCCAATGCTGCTGCCCCATTCCCCAGAGGAATGGGATGGGGAAGGGGAAGGGACAGCAACGAGGCGTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTACAAAGATATATCAGTTGGGCAAAGCTTTATTCAACAAGCTATGCCTACACTTGCAACAACCCCTACGCCACCGCCAACAACCGTGGAGCCTTATTCAGCCGTATATGGGTTCATGGGACACTCGACGAGCAATAATTTTGATCTCTATCATTTTGCTGATGCAGCAGTGTTCGAAAATGATCTGCCCAAGAACAGAAGCACTCAAACTGGCACTTTGTCTCGTCTTCGGCTGCCCCATCATCACCATCCCTCCTACTTTTACAATTAA

Coding sequence (CDS)

ATGTCACTCATGGCTGCTACTGTTGATTCCTCCAAGGAGGAAGAGCATTCAGAGACTGATTCACGATTGGGGGAAGGCCCATGCCAATTATCTTCCTTATTCTCCAATTCTTCTCCTCTCGTCCCAACCGCAGAAAGTGGACGAAATCCTGTTTATTCAAGCACCCATCTGTCGCGTAGTTCTAGAAGCAATCTTCCTGAAACTCGTACCGATTTTGGCAAAGTTGACGGAAAAGACGGCGTTGATAAGCAACCAGAATCCTCCTCTCTCTCCCAGCTTGAGCATCTCTGCCGAACCATGTGTAGCCGTGGCCTACGCAAGTACATAGTTTCTCATCTATCGGACCTCGCTAGCCTCCATCATGAAATTCCGCTTGCTTTAAAATGGGCTCCTAACCCGGCCAAACTCGTGTTCGATTGCATTGGCCGCTTTTATCTTCAGGGAAGCAAAGCCTACACCAAGGTCTCTCCTATGATTCCTGCTAGACAAGCCTCCATCCTCATCCTAGAACTTTTTCTGATCTCAGGTGCAGCTGAGACCAAAAATGATAAAAGAACAGAAATTGAGTCCTCCTTGAAGGTGGAAGCTGACCTTGCTGCTATTGCCTGGAGAAAAAGACTTATTACTGAAAGTGGTTCTTGTCAGGCAAGCGATATAGATGCCAGGGGTTTGCTTCTTTTTCTTGCGTCTTTCGGAATTCCTACTGTATTTACAAACGATGATTTAAGGGATCTCTTACGATCGAGTAACTCAAAGGGGCTATCGAATGCCCTTTGCCATTCACATTGTCTTCGTACGCGTATTCCTGACATTATAAAGGGGATGACGAAGAGCAGTAAGAATATTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGAATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATAAAGTACGAGGTTCAACCATGCAACTGAGACGAGTGAGTGAAGAGAAATTAGCTTCTCTGAAATGTGTTCTCAAATGTTTGGAAGATCACAAATTGGATCCAGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAGAACTTGGAGAAGGATATTGTGGAACTCGGAAAAAGAATGGAAGATAATGCGAGTCTGAAGAGAAAAACAGATGAAGCTTCCACACAGAAGTATCTGAGTCAAGAAATAAAGCGGTCACGAATGTCCGCAAATAAAGGAGGATTCCCTGTTATGTCTTATCCAGTCAATGGCTTGTTGGAACAAAATGCAACTACGTTTTTGGAGGACAAGAGCTGTTTTAGTACTAGTAGTAGTTCAATGCCACTAAAGTTATTGGATGGTGGACGTGCTTCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGGTTGAAACTACAGTTTTGCCTGCCGATATTATTGGTAGTGGTATCTCCAATGCTGCTGCCCCATTCCCCAGAGGAATGGGATGGGGAAGGGGAAGGGACAGCAACGAGGCGTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTACAAAGATATATCAGTTGGGCAAAGCTTTATTCAACAAGCTATGCCTACACTTGCAACAACCCCTACGCCACCGCCAACAACCGTGGAGCCTTATTCAGCCGTATATGGGTTCATGGGACACTCGACGAGCAATAATTTTGATCTCTATCATTTTGCTGATGCAGCAGTGTTCGAAAATGATCTGCCCAAGAACAGAAGCACTCAAACTGGCACTTTGTCTCGTCTTCGGCTGCCCCATCATCACCATCCCTCCTACTTTTACAATTAA

Homology

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BLAST of CSPI04G19440 vs. Swiss-Prot
Match: FRIGI_ARATH (Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 149/326 (45.71%), Postives = 212/326 (65.03%), Query Frame = 1


Query: 85  PESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRF 144
           PE+S+  +   +C  MCS+GLRKYI +++SD A L  EIP ALK A  PAK V DCIG+F
Sbjct: 137 PETSNKPEGGRMCELMCSKGLRKYIYANISDQAKLMEEIPSALKLAKEPAKFVLDCIGKF 196

Query: 145 YLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAWR 204
           YLQG +A+TK SPM  ARQ S+LILE FL+      +   + +IES +K EA+ AA+AWR
Sbjct: 197 YLQGRRAFTKESPMSSARQVSLLILESFLLM---PDRGKGKVKIESWIKDEAETAAVAWR 256

Query: 205 KRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSHCL 264
           KRL+TE G   A  +DARGLLL +A FG+P+ F + DL DL+R S S  ++ AL  S  L
Sbjct: 257 KRLMTEGGLAAAEKMDARGLLLLVACFGVPSNFRSTDLLDLIRMSGSNEIAGALKRSQFL 316

Query: 265 RTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGS 324
              +  I++   K   +IEA++++Y FGME+ F    +L SFL+   E++++   K + S
Sbjct: 317 VPMVSGIVESSIKRGMHIEALEMVYTFGMEDKFSAALVLTSFLKMSKESFERAKRKAQ-S 376

Query: 325 TMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNA 384
            +  +  + ++LA L  V++C+E HKLDP K LPGW+I E I +LEKD ++L K ME+ A
Sbjct: 377 PLAFKEAATKQLAVLSSVMQCMETHKLDPAKELPGWQIKEQIVSLEKDTLQLDKEMEEKA 436

Query: 385 -SLKRKTDEASTQKYLSQEIKRSRMS 410
            SL    + A  ++  +Q+IKR R+S
Sbjct: 437 RSLSLMEEAALAKRMYNQQIKRPRLS 458

[Close]

BLAST of CSPI04G19440 vs. Swiss-Prot
Match: FRIG0_ARATH (Inactive protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.0e-44
Identity = 94/177 (53.11%), Postives = 122/177 (68.93%), Query Frame = 1


Query: 85  PESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRF 144
           PE+S+  + E +C  MCS+GLRKYI +++SD A L  EIP ALK A  PAK V DCIG+F
Sbjct: 137 PETSNKPEGERICELMCSKGLRKYIYANISDQAKLMEEIPSALKLAKEPAKFVLDCIGKF 196

Query: 145 YLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAWR 204
           YLQG +A+TK SPM  ARQ S+LILE FL+      +   + +IES +K EA+ AA+AWR
Sbjct: 197 YLQGRRAFTKESPMSSARQVSLLILESFLL---MPDRGKGKVKIESWIKDEAETAAVAWR 256

Query: 205 KRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHS 262
           KRL+TE G   A  +DARGLLL +A FG+P+ F + DL DL+R S S  ++ AL  S
Sbjct: 257 KRLMTEGGLAAAEKMDARGLLLLVACFGVPSNFRSTDLLDLIRMSGSNEIAGALKRS 310

[Close]

BLAST of CSPI04G19440 vs. Swiss-Prot
Match: FRL3_ARATH (FRIGIDA-like protein 3 OS=Arabidopsis thaliana GN=FRL3 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 5.6e-27
Identity = 85/289 (29.41%), Postives = 141/289 (48.79%), Query Frame = 1


Query: 86  ESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRFY 145
           E  +  QL  LC  M S GL K++  +  +LASL  EIP+A + A NPA LV D +  FY
Sbjct: 168 EVKAYPQLLKLCGDMDSTGLHKFVSDNRKNLASLKEEIPMAFRAAANPASLVLDSLEGFY 227

Query: 146 LQGSKAYT--KVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAW 205
              +      K + ++  R+  I+++E   I  +   +N     +  ++K  A   A  W
Sbjct: 228 PMEAPTADGKKDANLLGMRRTCIMLMECLSILLSGLDRNCLAVVLSQNVKHRAKTIAEGW 287

Query: 206 RKRLIT-ESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSH 265
              L + +  +C  + ++A   L  LA+F I   F  D+L  L+   + +  +  LC S 
Sbjct: 288 NPLLESLDMDACNGNSLEAHAFLQLLATFAIVADFKEDELLKLIPMVSRRRQAAELCRSL 347

Query: 266 CLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVR 325
            L  ++P +I+ +  S K I+AV++ +AF +   F P  +L S+L E   +   +     
Sbjct: 348 GLAEKMPGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARRS-SPQGRPGN 407

Query: 326 GSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEK 372
            S       +E +L  LK V+KC+E+H L+  +  P   +H+ I  LEK
Sbjct: 408 ASPAVQDEFNERELIGLKTVIKCIEEHSLE--EQYPVEPLHKRILQLEK 453

[Close]

BLAST of CSPI04G19440 vs. Swiss-Prot
Match: FRL4B_ARATH (FRIGIDA-like protein 4b OS=Arabidopsis thaliana GN=FRL4B PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.2e-18
Identity = 82/312 (26.28%), Postives = 141/312 (45.19%), Query Frame = 1


Query: 71  DFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWA 130
           D G+VD  DG+        LS L+ LC  M +RG   ++++   +L +L  +IP+AL   
Sbjct: 113 DTGEVDDGDGL--------LSALKSLCLKMDARGFWGFVIARKKELENLRSQIPVALVDC 172

Query: 131 PNPAKLVFDCIGR-FYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIE 190
            +P KLV + +   F +       KVS       A ++ILE  +           R  + 
Sbjct: 173 VDPPKLVLEAVSEVFPVDKRGGGEKVSNDFG--WACVVILESLIPVMVDPVMGKSRLLVT 232

Query: 191 SSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDL---RDLL 250
            S+K +A   A  W+  L    G       D    L  L +FGI      DDL   R L+
Sbjct: 233 PSVKEKAKEIAETWKASLEERGGIENVKTPDVHTFLQHLVTFGI---VKKDDLALYRKLV 292

Query: 251 RSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSF 310
             S  +     L  S  L  ++PD+I+ +    + ++AV   +  G+ ++FPP  +L ++
Sbjct: 293 VGSAWRKQMPKLAVSVGLGDQMPDMIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAY 352

Query: 311 LQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMI 370
           L++  +      +    S      V+ ++ ++L+ VLKC+E++KL+  +  P   + + +
Sbjct: 353 LRDAKKATALITDDSNNSGRSAHLVARKEQSALRAVLKCIEEYKLE--EEFPPENLKKRL 409

Query: 371 KNLEKDIVELGK 379
             LEK   E  K
Sbjct: 413 DQLEKTKTEKRK 409

[Close]

BLAST of CSPI04G19440 vs. Swiss-Prot
Match: FRL4A_ARATH (FRIGIDA-like protein 4a OS=Arabidopsis thaliana GN=FRL4A PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 8.1e-18
Identity = 83/324 (25.62%), Postives = 144/324 (44.44%), Query Frame = 1


Query: 58  SRSSRSNLPETRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLA 117
           +R++  +L + R   G     D  D   E   LS L+ LC  M +RG   ++ +   +L 
Sbjct: 96  ARAALESLEKARDGCGDGSNDDSGDVDDEEGLLSALKSLCLKMDARGFWNFVTARKKELE 155

Query: 118 SLHHEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGA 177
           +L  +IP AL    +PA LV + I   +   ++   KVS       A ++ILE       
Sbjct: 156 NLRSKIPAALVDCVDPAMLVLEAISEVFPVDTRG-DKVSN--DYGWACVVILESLTPVIV 215

Query: 178 AETKNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVF 237
                  R  +  S+K +A   A  W+K L            D    L  L +FGI    
Sbjct: 216 DPVIGKSRLLVTPSVKEKAKEIAETWKKSLEERGRIENVKTPDVHTFLQHLVTFGI---V 275

Query: 238 TNDDL---RDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGME 297
            ++DL   R L+  S  +     L  S  L  ++PD+I+ +    + ++AV   Y  G+ 
Sbjct: 276 KSEDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPDMIEELISRGQQLDAVHFTYEVGLV 335

Query: 298 NVFPPQEILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPV 357
           + FPP  +L ++L++  ++    +     +      V+ ++ ++LK VLKC+E++KL+  
Sbjct: 336 DKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRATHLVARKEQSALKAVLKCIEEYKLE-- 395

Query: 358 KSLPGWKIHEMIKNLEKDIVELGK 379
           +  P   + + +  LEK   E  K
Sbjct: 396 EEFPPENLKKRLDQLEKTKTEKRK 411

[Close]

BLAST of CSPI04G19440 vs. TrEMBL
Match: A0A0A0KYX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G437530 PE=4 SV=1)

HSP 1 Score: 1205.7 bits (3118), Expect = 0.0e+00
Identity = 609/612 (99.51%), Postives = 610/612 (99.67%), Query Frame = 1


Query: 1   MSLMAATVDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRS 60
           MSLMAATVDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRS
Sbjct: 1   MSLMAATVDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRS 60

Query: 61  SRSNLPETRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLH 120
           SRSNLPETRTDFGKVDGK+GVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLA LH
Sbjct: 61  SRSNLPETRTDFGKVDGKEGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLARLH 120

Query: 121 HEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAET 180
           HEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAET
Sbjct: 121 HEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAET 180

Query: 181 KNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTND 240
           KNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTND
Sbjct: 181 KNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTND 240

Query: 241 DLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQ 300
           DLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQ
Sbjct: 241 DLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQ 300

Query: 301 EILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGW 360
           EILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGW
Sbjct: 301 EILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGW 360

Query: 361 KIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSY 420
           KIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSY
Sbjct: 361 KIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSY 420

Query: 421 PVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVL 480
           PVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVL
Sbjct: 421 PVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVL 480

Query: 481 PADIIGSGISNAAAPFPRGMGWGRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPT 540
           PADIIGSGISNAAAPFPRGMGWGRGRDSNEASIYKMGPTRE AYKDISVGQSFIQQAMPT
Sbjct: 481 PADIIGSGISNAAAPFPRGMGWGRGRDSNEASIYKMGPTREFAYKDISVGQSFIQQAMPT 540

Query: 541 LATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLR 600
           LATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLR
Sbjct: 541 LATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLR 600

Query: 601 LPHHHHPSYFYN 613
           LPHHHHPSYFYN
Sbjct: 601 LPHHHHPSYFYN 612

[Close]

BLAST of CSPI04G19440 vs. TrEMBL
Match: A0A067JI55_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26334 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.5e-90
Identity = 206/473 (43.55%), Postives = 279/473 (58.99%), Query Frame = 1


Query: 41  VPTAESGRNPVYSSTHLSRSSRSNLPETRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTM 100
           VP   S   PV  +T +  +    +    T   K +    V      S+ S+L  LC  M
Sbjct: 117 VPATASAPAPVPPTTPIITAKEKTIEAVETANRKTETDKAV-----VSTKSELISLCEVM 176

Query: 101 CSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIP 160
           C RGLRKY+ SHLS++  L  E+P ALK A  PA+LV DC+GRFYLQGS+AYTK SPMIP
Sbjct: 177 CGRGLRKYLTSHLSNVKKLRAEVPSALKCASKPARLVLDCMGRFYLQGSRAYTKNSPMIP 236

Query: 161 ARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDID 220
            R+A ILILE FL+        D   E ++S+K EA+ AA+AWRKRL+ E G  +AS+ID
Sbjct: 237 GRKAGILILEFFLLI------IDNDIEFDASVKQEAEQAAVAWRKRLVAEGGVSRASEID 296

Query: 221 ARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSK 280
           ARGLLLF+  FGIP VF+N+D+ DL+R S+ K +++AL  S  L  RI DI++ M     
Sbjct: 297 ARGLLLFVGCFGIPKVFSNEDVWDLIRLSSPKQIADALRRSRFLVARISDILERMMNHGA 356

Query: 281 NIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLK 340
            IEAVD+ Y FG+E  FPPQ++L SFL++ +E  K+R  +   S + L+  SE+++A+LK
Sbjct: 357 KIEAVDVAYTFGVEKKFPPQKLLTSFLRDSNEALKRRKREANISPIVLKEASEKQVAALK 416

Query: 341 CVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYL- 400
            V+K LED K DP K LPGW++ EMI  LEK+I ++ K++ D  + KRK DE      L 
Sbjct: 417 TVIKLLEDRKFDPTKLLPGWQLREMIDKLEKEIGDINKKIADKVTPKRKADENEFASNLR 476

Query: 401 SQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQ 460
           SQE KRSR +    G P++S P  GL EQ A   ++  S F   S+S+ + LLDGG + Q
Sbjct: 477 SQETKRSRFT----GSPLISSPSIGLHEQRAAGHVDGNSLF---SASLRMNLLDGGFSGQ 536

Query: 461 LGNYQIASSLRGPGLVETTVLPADIIGSGISNAAAPFPRGMGWGRGRDSNEAS 513
             N   A  +  P       LP   IG      +     G+G   G  +  +S
Sbjct: 537 TNNPASAGPM--PYGYSVPSLPEHAIGMVKGGGSILQGAGVGLSTGYSAPTSS 569

[Close]

BLAST of CSPI04G19440 vs. TrEMBL
Match: B9RA29_RICCO (Protein FRIGIDA, putative OS=Ricinus communis GN=RCOM_1502940 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 212/523 (40.54%), Postives = 304/523 (58.13%), Query Frame = 1


Query: 68  TRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLAL 127
           T TD  K    +      +SSS S+L  LC  MC RGLRKY+ S+L+++  L +E+P AL
Sbjct: 113 TITDAKKETVINSAPPPAKSSSSSELISLCEMMCGRGLRKYLTSNLTNIPKLRNEVPTAL 172

Query: 128 KWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTE 187
           K+AP PAKLVFDC G FYLQGS+AYTK SPM+P R+ASIL+LELFL+        D   +
Sbjct: 173 KYAPKPAKLVFDCFGGFYLQGSRAYTKDSPMVPGRKASILVLELFLLI------LDDGIQ 232

Query: 188 IESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLR 247
            +S L+ EA  AA AWRKRLI E G  +A +IDARGLLLF+  FGIP VFT+ D+ DL+R
Sbjct: 233 FDSDLRQEAQQAAAAWRKRLIAEGGVSKACEIDARGLLLFVGCFGIPKVFTSGDIWDLIR 292

Query: 248 SSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFL 307
           SSN + +S+AL  SH L T++ DI++ M  +   IEA+D+ Y FG+E+ FPPQ++L SFL
Sbjct: 293 SSNLQQISDALKRSHVLVTKVSDILERMMNNGMKIEAIDVAYTFGIEDKFPPQKLLTSFL 352

Query: 308 QECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIK 367
           ++  E  K+R  +   S + L+  S++ L++LK  +K LE  KLDP K LPGW++ E I 
Sbjct: 353 RDSKEALKRRRREANNSPVLLKEASQKHLSTLKSAMKFLEGRKLDPKKLLPGWQVTEKID 412

Query: 368 NLEKDIVELGKRMEDNASLKRKTDEASTQKYL-SQEIKRSRMSANKGGFPVMSYPVNGLL 427
            LEK+I +L ++++D  + KRK DE      L SQE+KR R +    G P++S P  GL 
Sbjct: 413 KLEKEIADLNRKIDDKVAPKRKADENEFSINLKSQEVKRLRFT----GSPLISSPSFGLH 472

Query: 428 EQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVLPADIIG 487
           EQ   + L+    ++ S+    + ++DGG +  + N  +A S+              + G
Sbjct: 473 EQRVPSHLDGNGSYNASTR---INMVDGGFSCLISNPPVAGSM--------------LYG 532

Query: 488 SGISNAAAPFPRGMGW-GRGRDS----------NEASIYKMGPTRELAYKDISVGQSFIQ 547
           SG  +AA   P    + G  R++          +  S +      + +  D + GQS + 
Sbjct: 533 SGSYSAAYGVPSTSSFAGVYRETLADRTGNITGSNVSAFGWHGVGDASIIDGTRGQSLVH 592

Query: 548 QAMPTLATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADA 579
           Q+   L   P+       P S+  G    S+++  DLY FADA
Sbjct: 593 QSGSGL-FGPSIEGFAGLPNSSPAGAANQSSAS--DLYRFADA 605

[Close]

BLAST of CSPI04G19440 vs. TrEMBL
Match: K7KLA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G203400 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 210/512 (41.02%), Postives = 295/512 (57.62%), Query Frame = 1


Query: 82  DKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCI 141
           +++ E     +L  LC+TM SRGLRKY+++ LS+ ASL  ++PLAL+ APNP++LVF+CI
Sbjct: 100 EEREEEEEEDELLTLCKTMNSRGLRKYVLTRLSETASLREQVPLALRSAPNPSRLVFECI 159

Query: 142 GRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAI 201
           GRF+LQGSKAYTK SPMIPARQ S+L+LE +L+SG    + D    +E+SLK E D AA+
Sbjct: 160 GRFFLQGSKAYTKDSPMIPARQVSVLVLEYYLLSGCVGNEVD----LEASLKREVDSAAV 219

Query: 202 AWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHS 261
           AWRKR+  E G  +A+++DARGL+LF+A FGIPTVF ++D+  L+ +SN +  S+AL  S
Sbjct: 220 AWRKRIFVEGGLLKAAEVDARGLILFIAIFGIPTVFKDEDIYSLVSASNGREFSDALLKS 279

Query: 262 HCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKV 321
             L  R+ D+  GM K    ++AVD+ Y FG E  + P+  L SFLQ+ +ETWKK     
Sbjct: 280 QPLLKRVSDVADGMIKKGMAVKAVDLAYTFGFEEKYSPRTALTSFLQKSEETWKKAKQDA 339

Query: 322 RGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRME 381
           R     L+   E+ LA+LK V+ CLE HK+D VK LPGW++   I NLEKDI +  K++E
Sbjct: 340 RDFPSALKVAHEKYLAALKSVVNCLEGHKIDFVKLLPGWQLKNKITNLEKDIGDANKKIE 399

Query: 382 DNASLKRKTDE-ASTQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCF 441
           + + LKRK D+  S+ K    E KR+R +       V+S  +  L EQ   + ++  S +
Sbjct: 400 EKSMLKRKVDKNNSSNKMKIPEAKRTRFTGKDAS--VLSPSLAILQEQRIVSHMDGNSSY 459

Query: 442 STSSSSMPLKLLDGGRASQLGNY--------QIASSLRGPGLVETTVLPADIIGSGISNA 501
             S S++   LLDG      GNY         I+ SL    L  T    A+++G  +  +
Sbjct: 460 DGSLSAL---LLDG---RSYGNYPNNYLAAASISDSLAEKYLGSTVASGANMLGGAMGGS 519

Query: 502 AAPFPRGM---GWGRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTPPP 561
            + +   M     G   +SN       G        D  VGQSF+ Q+  TL        
Sbjct: 520 YSGYQGDMIRDNVGTVLNSNSHLYRYHGIGEGALSHDRPVGQSFVGQSASTL--NNLYGK 579

Query: 562 TTVEPYSAV---YGFMGHSTSNNFDLYHFADA 579
           T+ E ++ V         S S   DLY FADA
Sbjct: 580 TSTEGFAGVPEHLSIGASSRSGGSDLYGFADA 597

[Close]

BLAST of CSPI04G19440 vs. TrEMBL
Match: K7KVE1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G162100 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 205/501 (40.92%), Postives = 293/501 (58.48%), Query Frame = 1


Query: 83  KQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIG 142
           K+ E     +L  LC+TM SRGLRKY+++ LS+ ASL  ++P+AL+ A  P++LVF+CIG
Sbjct: 107 KEEEKEKEDELITLCKTMNSRGLRKYVLTRLSETASLREQVPVALRSAAKPSRLVFECIG 166

Query: 143 RFYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIA 202
           RF+LQGSKAYTK SPM+PARQ S+L+LE +L+SG    + D    +E+SLK EAD AA+A
Sbjct: 167 RFFLQGSKAYTKNSPMVPARQVSVLVLEHYLLSGCVGNEKD----VEASLKREADSAAVA 226

Query: 203 WRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSH 262
           WRKR+  E G  +A+++DARGL+LF+A FGIP+VF ++D+ +L+  SN +  S+AL  S 
Sbjct: 227 WRKRMFVEGGLLKAAEVDARGLILFVAGFGIPSVFKDEDIYNLVCVSNGREFSDALLQSQ 286

Query: 263 CLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVR 322
            L  R+ D+  GM K    ++AVD+ Y FG E  + PQ  L SFLQ+ +ETWKK     R
Sbjct: 287 PLLKRVSDVADGMMKKGMAVKAVDLAYTFGFEEKYSPQTALTSFLQKSEETWKKAKQDAR 346

Query: 323 GSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMED 382
                L+   E+ LA+L+ V+KCLE HK+DPVK LPGW++   I NLEKDI +  K++++
Sbjct: 347 DFPSALKVAHEKYLAALQSVVKCLEGHKIDPVKFLPGWQLKNKITNLEKDISDTNKKIDE 406

Query: 383 NASLKRKTDE-ASTQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFS 442
            + LKRK D+  S+ K    E KR+R +       V+S  +  L EQ   + ++  S + 
Sbjct: 407 KSMLKRKVDKNNSSNKMKIPEAKRARFTGKDAS--VLSPSLATLQEQRIFSRMDGNSSYD 466

Query: 443 TSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVLPADIIGSGISNAAAPFPRGMG 502
            S S+    LLDG       N  + ++     L E        +GS +++ A     G  
Sbjct: 467 GSLSA---HLLDGRSYGNYPNNYLTAASASDSLAE------KYLGSAVASGANML--GGA 526

Query: 503 WGRGRDSNEASIYKMGPTRELAYK-DISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVYG 562
            G      +  +Y+     E A   D SVGQSF+ Q+  TL        T+ E ++ V  
Sbjct: 527 MGGSFSGYQGDMYRYHGIGEGALSHDRSVGQSFVGQSASTL--NNLYGKTSTEGFAGVPE 586

Query: 563 FM---GHSTSNNFDLYHFADA 579
            +     S S   DLY FADA
Sbjct: 587 HLSVGASSRSGGSDLYGFADA 588

[Close]

BLAST of CSPI04G19440 vs. TAIR10
Match: AT4G00650.1 (AT4G00650.1 FRIGIDA-like protein)

HSP 1 Score: 180.6 bits (457), Expect = 2.8e-45
Identity = 94/177 (53.11%), Postives = 122/177 (68.93%), Query Frame = 1


Query: 85  PESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRF 144
           PE+S+  + E +C  MCS+GLRKYI +++SD A L  EIP ALK A  PAK V DCIG+F
Sbjct: 137 PETSNKPEGERICELMCSKGLRKYIYANISDQAKLMEEIPSALKLAKEPAKFVLDCIGKF 196

Query: 145 YLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAWR 204
           YLQG +A+TK SPM  ARQ S+LILE FL+      +   + +IES +K EA+ AA+AWR
Sbjct: 197 YLQGRRAFTKESPMSSARQVSLLILESFLL---MPDRGKGKVKIESWIKDEAETAAVAWR 256

Query: 205 KRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHS 262
           KRL+TE G   A  +DARGLLL +A FG+P+ F + DL DL+R S S  ++ AL  S
Sbjct: 257 KRLMTEGGLAAAEKMDARGLLLLVACFGVPSNFRSTDLLDLIRMSGSNEIAGALKRS 310

[Close]

BLAST of CSPI04G19440 vs. TAIR10
Match: AT5G48385.1 (AT5G48385.1 FRIGIDA-like protein)

HSP 1 Score: 124.0 bits (310), Expect = 3.2e-28
Identity = 85/289 (29.41%), Postives = 141/289 (48.79%), Query Frame = 1


Query: 86  ESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRFY 145
           E  +  QL  LC  M S GL K++  +  +LASL  EIP+A + A NPA LV D +  FY
Sbjct: 168 EVKAYPQLLKLCGDMDSTGLHKFVSDNRKNLASLKEEIPMAFRAAANPASLVLDSLEGFY 227

Query: 146 LQGSKAYT--KVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAW 205
              +      K + ++  R+  I+++E   I  +   +N     +  ++K  A   A  W
Sbjct: 228 PMEAPTADGKKDANLLGMRRTCIMLMECLSILLSGLDRNCLAVVLSQNVKHRAKTIAEGW 287

Query: 206 RKRLIT-ESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSH 265
              L + +  +C  + ++A   L  LA+F I   F  D+L  L+   + +  +  LC S 
Sbjct: 288 NPLLESLDMDACNGNSLEAHAFLQLLATFAIVADFKEDELLKLIPMVSRRRQAAELCRSL 347

Query: 266 CLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVR 325
            L  ++P +I+ +  S K I+AV++ +AF +   F P  +L S+L E   +   +     
Sbjct: 348 GLAEKMPGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARRS-SPQGRPGN 407

Query: 326 GSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEK 372
            S       +E +L  LK V+KC+E+H L+  +  P   +H+ I  LEK
Sbjct: 408 ASPAVQDEFNERELIGLKTVIKCIEEHSLE--EQYPVEPLHKRILQLEK 453

[Close]

BLAST of CSPI04G19440 vs. TAIR10
Match: AT4G14900.1 (AT4G14900.1 FRIGIDA-like protein)

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-19
Identity = 82/312 (26.28%), Postives = 141/312 (45.19%), Query Frame = 1


Query: 71  DFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWA 130
           D G+VD  DG+        LS L+ LC  M +RG   ++++   +L +L  +IP+AL   
Sbjct: 113 DTGEVDDGDGL--------LSALKSLCLKMDARGFWGFVIARKKELENLRSQIPVALVDC 172

Query: 131 PNPAKLVFDCIGR-FYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIE 190
            +P KLV + +   F +       KVS       A ++ILE  +           R  + 
Sbjct: 173 VDPPKLVLEAVSEVFPVDKRGGGEKVSNDFG--WACVVILESLIPVMVDPVMGKSRLLVT 232

Query: 191 SSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDL---RDLL 250
            S+K +A   A  W+  L    G       D    L  L +FGI      DDL   R L+
Sbjct: 233 PSVKEKAKEIAETWKASLEERGGIENVKTPDVHTFLQHLVTFGI---VKKDDLALYRKLV 292

Query: 251 RSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSF 310
             S  +     L  S  L  ++PD+I+ +    + ++AV   +  G+ ++FPP  +L ++
Sbjct: 293 VGSAWRKQMPKLAVSVGLGDQMPDMIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAY 352

Query: 311 LQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMI 370
           L++  +      +    S      V+ ++ ++L+ VLKC+E++KL+  +  P   + + +
Sbjct: 353 LRDAKKATALITDDSNNSGRSAHLVARKEQSALRAVLKCIEEYKLE--EEFPPENLKKRL 409

Query: 371 KNLEKDIVELGK 379
             LEK   E  K
Sbjct: 413 DQLEKTKTEKRK 409

[Close]

BLAST of CSPI04G19440 vs. TAIR10
Match: AT3G22440.1 (AT3G22440.1 FRIGIDA-like protein)

HSP 1 Score: 93.6 bits (231), Expect = 4.6e-19
Identity = 83/324 (25.62%), Postives = 144/324 (44.44%), Query Frame = 1


Query: 58  SRSSRSNLPETRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLA 117
           +R++  +L + R   G     D  D   E   LS L+ LC  M +RG   ++ +   +L 
Sbjct: 96  ARAALESLEKARDGCGDGSNDDSGDVDDEEGLLSALKSLCLKMDARGFWNFVTARKKELE 155

Query: 118 SLHHEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGA 177
           +L  +IP AL    +PA LV + I   +   ++   KVS       A ++ILE       
Sbjct: 156 NLRSKIPAALVDCVDPAMLVLEAISEVFPVDTRG-DKVSN--DYGWACVVILESLTPVIV 215

Query: 178 AETKNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVF 237
                  R  +  S+K +A   A  W+K L            D    L  L +FGI    
Sbjct: 216 DPVIGKSRLLVTPSVKEKAKEIAETWKKSLEERGRIENVKTPDVHTFLQHLVTFGI---V 275

Query: 238 TNDDL---RDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGME 297
            ++DL   R L+  S  +     L  S  L  ++PD+I+ +    + ++AV   Y  G+ 
Sbjct: 276 KSEDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPDMIEELISRGQQLDAVHFTYEVGLV 335

Query: 298 NVFPPQEILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPV 357
           + FPP  +L ++L++  ++    +     +      V+ ++ ++LK VLKC+E++KL+  
Sbjct: 336 DKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRATHLVARKEQSALKAVLKCIEEYKLE-- 395

Query: 358 KSLPGWKIHEMIKNLEKDIVELGK 379
           +  P   + + +  LEK   E  K
Sbjct: 396 EEFPPENLKKRLDQLEKTKTEKRK 411

[Close]

BLAST of CSPI04G19440 vs. TAIR10
Match: AT5G16320.1 (AT5G16320.1 FRIGIDA like 1)

HSP 1 Score: 85.9 bits (211), Expect = 9.5e-17
Identity = 83/352 (23.58%), Postives = 152/352 (43.18%), Query Frame = 1


Query: 70  TDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKW 129
           +D GK    + V +QP      +L  LC  +   GL KY++    D   L+ E+  A+++
Sbjct: 80  SDAGKSSSSEEVSEQPVVEP--ELRALCEKIDGIGLIKYLIRIWDDETPLNQEVSAAIRY 139

Query: 130 APNPAKLVFDCI-GRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEI 189
           +P+ A +V D I G  Y   S   +        R+  +L++E+ +   A  T + +    
Sbjct: 140 SPDTASMVLDAIEGSNYTPSSSGRS-----FDVRRVFVLLMEVLIEINANITVDTRN--- 199

Query: 190 ESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRS 249
                  A   A  W+ ++            +A   L  +A+F + + F  ++L D +  
Sbjct: 200 ------RAKKLAYHWKSKV-------GVKPFEALVFLHLVAAFELGSEFDTEELSDYVFM 259

Query: 250 SNSKGLSNALCHSHCL-RTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFL 309
                 +  +C+   + R R+  +IK +  S K I AV  +Y  GM + F P  +L S++
Sbjct: 260 IAKYKQATLVCNKIGVDRKRVGKLIKTLLDSGKPILAVKFMYECGMTDEFEPIPVLKSYI 319

Query: 310 QECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIK 369
           ++C E   +   +   S       S++++++LK ++K ++D  L+        K+ E ++
Sbjct: 320 KDCREAALRVCVEDNYSLKSQNEASDKEVSALKPLIKIIKDQNLE--SEFTQEKVEERVE 379

Query: 370 NLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMS 420
            LEK          + A  KR T     Q+   +  KR+R   N    PV S
Sbjct: 380 ELEK----------NKALRKRNTTNPPKQEPQQKGKKRTRDCKNGSQVPVPS 396

[Close]

BLAST of CSPI04G19440 vs. NCBI nr
Match: gi|449453187|ref|XP_004144340.1| (PREDICTED: protein FRIGIDA [Cucumis sativus])

HSP 1 Score: 1205.7 bits (3118), Expect = 0.0e+00
Identity = 609/612 (99.51%), Postives = 610/612 (99.67%), Query Frame = 1


Query: 1   MSLMAATVDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRS 60
           MSLMAATVDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRS
Sbjct: 1   MSLMAATVDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRS 60

Query: 61  SRSNLPETRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLH 120
           SRSNLPETRTDFGKVDGK+GVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLA LH
Sbjct: 61  SRSNLPETRTDFGKVDGKEGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLARLH 120

Query: 121 HEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAET 180
           HEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAET
Sbjct: 121 HEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAET 180

Query: 181 KNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTND 240
           KNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTND
Sbjct: 181 KNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTND 240

Query: 241 DLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQ 300
           DLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQ
Sbjct: 241 DLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQ 300

Query: 301 EILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGW 360
           EILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGW
Sbjct: 301 EILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGW 360

Query: 361 KIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSY 420
           KIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSY
Sbjct: 361 KIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSY 420

Query: 421 PVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVL 480
           PVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVL
Sbjct: 421 PVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVL 480

Query: 481 PADIIGSGISNAAAPFPRGMGWGRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPT 540
           PADIIGSGISNAAAPFPRGMGWGRGRDSNEASIYKMGPTRE AYKDISVGQSFIQQAMPT
Sbjct: 481 PADIIGSGISNAAAPFPRGMGWGRGRDSNEASIYKMGPTREFAYKDISVGQSFIQQAMPT 540

Query: 541 LATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLR 600
           LATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLR
Sbjct: 541 LATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLR 600

Query: 601 LPHHHHPSYFYN 613
           LPHHHHPSYFYN
Sbjct: 601 LPHHHHPSYFYN 612

[Close]

BLAST of CSPI04G19440 vs. NCBI nr
Match: gi|659069372|ref|XP_008449489.1| (PREDICTED: protein FRIGIDA [Cucumis melo])

HSP 1 Score: 1061.2 bits (2743), Expect = 6.8e-307
Identity = 551/605 (91.07%), Postives = 570/605 (94.21%), Query Frame = 1


Query: 8   VDSSKEEEHSETDSRLGEGPCQLSSLFSNSSPLVPTAESGRNPVYSSTHLSRSSRSNLPE 67
           +D+  ++  S ++S L      LSSL   SS LVPTAESGRNPVYSSTH SRS RSNLPE
Sbjct: 80  IDARSKQHMSSSNSLLDNHSQLLSSLSFKSSTLVPTAESGRNPVYSSTHPSRSPRSNLPE 139

Query: 68  TRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLAL 127
           TRT  GKVDGK+GVDKQ ESSSLS+LEHLC+TMCSRGLRKYIVSHLSDLA+L HEIPLAL
Sbjct: 140 TRTYSGKVDGKEGVDKQTESSSLSELEHLCQTMCSRGLRKYIVSHLSDLANLRHEIPLAL 199

Query: 128 KWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTE 187
           K APNPAKLVFDCIGRFYLQGSKAYTK SPMIPARQASILILELFLISGAAETKNDKRTE
Sbjct: 200 KCAPNPAKLVFDCIGRFYLQGSKAYTKDSPMIPARQASILILELFLISGAAETKNDKRTE 259

Query: 188 IESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLR 247
           IESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLR
Sbjct: 260 IESSLKVEADLAAIAWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLR 319

Query: 248 SSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFL 307
           SSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGME+VFPPQEILLSFL
Sbjct: 320 SSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFL 379

Query: 308 QECDETWKKRINKVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIK 367
           QECDETWKKRIN+VRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIK
Sbjct: 380 QECDETWKKRINEVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIK 439

Query: 368 NLEKDIVELGKRMEDNASLKRKTDEASTQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLE 427
           NLEKDIVEL KRMEDNASLKRKTDEASTQKYLSQEIKRSR+ A+KGGFPVMSYPVNGLLE
Sbjct: 440 NLEKDIVELRKRMEDNASLKRKTDEASTQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLE 499

Query: 428 QNATTFLEDKSCFSTSSSSMPLKLLDGGRASQLGNYQIASSLRGPGLVETTVLPADIIGS 487
           QNA TFLEDKSCFSTSSSSMP KLLDGGRASQLGNYQIASSLRGPGL+ETTVLPAD IGS
Sbjct: 500 QNAATFLEDKSCFSTSSSSMPQKLLDGGRASQLGNYQIASSLRGPGLLETTVLPAD-IGS 559

Query: 488 GISNAAAPFPRGMGWGRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP 547
           GI+NAAA FPRGM  GRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP
Sbjct: 560 GITNAAASFPRGM--GRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP 619

Query: 548 PPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFENDLPKNRSTQTGTLSRLRLPHHHHP 607
           PPTTVEPYSAV GFMGHSTSNNFDLYHFADAAVFENDLPKN ++QTGTLSRLRLPH+HHP
Sbjct: 620 PPTTVEPYSAVDGFMGHSTSNNFDLYHFADAAVFENDLPKNSTSQTGTLSRLRLPHNHHP 679

Query: 608 SYFYN 613
            YFYN
Sbjct: 680 PYFYN 680

[Close]

BLAST of CSPI04G19440 vs. NCBI nr
Match: gi|225461850|ref|XP_002283789.1| (PREDICTED: protein FRIGIDA [Vitis vinifera])

HSP 1 Score: 356.7 bits (914), Expect = 8.2e-95
Identity = 223/527 (42.31%), Postives = 301/527 (57.12%), Query Frame = 1


Query: 82  DKQPESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCI 141
           +  P  +S+S+L  LC  M SRGLRKYI+SHLSD+A L  E+P ALK AP PAKLV +CI
Sbjct: 103 EPMPAQTSVSELGFLCGMMRSRGLRKYIISHLSDVAKLREEVPAALKGAPKPAKLVLECI 162

Query: 142 GRFYLQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAI 201
           GRF+LQGSKA+ K + M+P+RQAS+LILE FL+S          TE+E S+K EADLAA+
Sbjct: 163 GRFFLQGSKAFGKATHMVPSRQASLLILEFFLLSDC--------TEMEPSVKEEADLAAV 222

Query: 202 AWRKRLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHS 261
            WRKRLI E G   ASDIDARGLLL +ASFGIP +F N+DLR+L+R S  K +S+AL  S
Sbjct: 223 TWRKRLINEGGVSNASDIDARGLLLLVASFGIPALFRNEDLRNLIRLSCPKEISDALRRS 282

Query: 262 HCLRTRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKV 321
             L  R+PD+I+GM K+  N+EAVD  Y FG+E  FP  +IL SFL+E  E WK+   + 
Sbjct: 283 RFLLARVPDVIQGMIKNQMNVEAVDFAYTFGLEEKFPIWKILTSFLREHKEEWKR--TRE 342

Query: 322 RGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRME 381
             S ++L++ +E  L+++K V +CLEDH++DP K L GW I E I  LEK++ +L K+ME
Sbjct: 343 EDSPIRLKKANENYLSAMKSVTRCLEDHRVDPSKLLSGWHIDEKIIQLEKEMADLDKKME 402

Query: 382 DNASLKRKTDEA-STQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCF 441
               LKRK DE  S +K  ++EIK S ++A           V GL EQ     +  +S +
Sbjct: 403 GKVMLKRKADEIDSLKKMKTREIKHSPIAAPSS--------VIGLQEQRVADNMASRSFY 462

Query: 442 STSSSSMPLKLLDGGRASQLGNYQIASS-LRGPGLVETTVLPADIIGSGISNAAAPFPRG 501
               S+MP+  LD G    +  Y  AS+ L G G      LP +I G+   + +     G
Sbjct: 463 ---DSTMPINFLDSGFPGHISTYPAASAMLHGSG---GGSLPENITGTMSGSGSGTRVHG 522

Query: 502 MGWGRGR---------------------DSNEASIYKMGP----TRELAYKDISVGQSFI 561
            G G G                      D     +   GP     R++ + D  +GQSFI
Sbjct: 523 TGTGPGMAGTGGVPSMASFSGAHGEMLFDRTGQMMKNNGPPYAGRRDMGFNDRVIGQSFI 582

Query: 562 QQAMPTLATTPTPPPTTVEPYSAVYGFMGHSTSNN---FDLYHFADA 579
                    +   P T++E +  +      + +N     DLY FADA
Sbjct: 583 AHPASMGVDSIFGPSTSMESFPGMPNAPSINAANGSSASDLYQFADA 605

[Close]

BLAST of CSPI04G19440 vs. NCBI nr
Match: gi|802770094|ref|XP_012090538.1| (PREDICTED: protein FRIGIDA [Jatropha curcas])

HSP 1 Score: 340.1 bits (871), Expect = 7.9e-90
Identity = 206/473 (43.55%), Postives = 279/473 (58.99%), Query Frame = 1


Query: 41  VPTAESGRNPVYSSTHLSRSSRSNLPETRTDFGKVDGKDGVDKQPESSSLSQLEHLCRTM 100
           VP   S   PV  +T +  +    +    T   K +    V      S+ S+L  LC  M
Sbjct: 117 VPATASAPAPVPPTTPIITAKEKTIEAVETANRKTETDKAV-----VSTKSELISLCEVM 176

Query: 101 CSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRFYLQGSKAYTKVSPMIP 160
           C RGLRKY+ SHLS++  L  E+P ALK A  PA+LV DC+GRFYLQGS+AYTK SPMIP
Sbjct: 177 CGRGLRKYLTSHLSNVKKLRAEVPSALKCASKPARLVLDCMGRFYLQGSRAYTKNSPMIP 236

Query: 161 ARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAWRKRLITESGSCQASDID 220
            R+A ILILE FL+        D   E ++S+K EA+ AA+AWRKRL+ E G  +AS+ID
Sbjct: 237 GRKAGILILEFFLLI------IDNDIEFDASVKQEAEQAAVAWRKRLVAEGGVSRASEID 296

Query: 221 ARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSHCLRTRIPDIIKGMTKSSK 280
           ARGLLLF+  FGIP VF+N+D+ DL+R S+ K +++AL  S  L  RI DI++ M     
Sbjct: 297 ARGLLLFVGCFGIPKVFSNEDVWDLIRLSSPKQIADALRRSRFLVARISDILERMMNHGA 356

Query: 281 NIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGSTMQLRRVSEEKLASLK 340
            IEAVD+ Y FG+E  FPPQ++L SFL++ +E  K+R  +   S + L+  SE+++A+LK
Sbjct: 357 KIEAVDVAYTFGVEKKFPPQKLLTSFLRDSNEALKRRKREANISPIVLKEASEKQVAALK 416

Query: 341 CVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRKTDEASTQKYL- 400
            V+K LED K DP K LPGW++ EMI  LEK+I ++ K++ D  + KRK DE      L 
Sbjct: 417 TVIKLLEDRKFDPTKLLPGWQLREMIDKLEKEIGDINKKIADKVTPKRKADENEFASNLR 476

Query: 401 SQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDGGRASQ 460
           SQE KRSR +    G P++S P  GL EQ A   ++  S F   S+S+ + LLDGG + Q
Sbjct: 477 SQETKRSRFT----GSPLISSPSIGLHEQRAAGHVDGNSLF---SASLRMNLLDGGFSGQ 536

Query: 461 LGNYQIASSLRGPGLVETTVLPADIIGSGISNAAAPFPRGMGWGRGRDSNEAS 513
             N   A  +  P       LP   IG      +     G+G   G  +  +S
Sbjct: 537 TNNPASAGPM--PYGYSVPSLPEHAIGMVKGGGSILQGAGVGLSTGYSAPTSS 569

[Close]

BLAST of CSPI04G19440 vs. NCBI nr
Match: gi|950963973|ref|XP_014498449.1| (PREDICTED: protein FRIGIDA [Vigna radiata var. radiata])

HSP 1 Score: 338.6 bits (867), Expect = 2.3e-89
Identity = 221/576 (38.37%), Postives = 324/576 (56.25%), Query Frame = 1


Query: 29  QLSSLFSNSSPLVPTAESGRNPVYSSTHLSRSSRSNLPETRTDFGKVDGKDGVDKQP--- 88
           ++  L S+ S   P A+     + S +  +++  +  P+T+T+  + + ++  +K+    
Sbjct: 64  RMKELQSSGSNASPNAKETTEAIVSQSETAKTDSNPKPKTKTEEEEEEEEEEEEKEKVKE 123

Query: 89  ESSSLSQLEHLCRTMCSRGLRKYIVSHLSDLASLHHEIPLALKWAPNPAKLVFDCIGRFY 148
           E     +L  LC+TM SRGLRKY++S LSD ASL  ++P+ALK +P P+KLVF+CIGRF+
Sbjct: 124 EEKEEDELLSLCKTMNSRGLRKYVLSRLSDTASLREQVPVALKSSPKPSKLVFECIGRFF 183

Query: 149 LQGSKAYTKVSPMIPARQASILILELFLISGAAETKNDKRTEIESSLKVEADLAAIAWRK 208
           LQGSKAYTK SPMIPARQ S+L+LE +L+SG       K  E+E+SLK EAD AA+AWRK
Sbjct: 184 LQGSKAYTKDSPMIPARQVSVLVLEYYLLSGCV----GKEEEVEASLKKEADSAAVAWRK 243

Query: 209 RLITESGSCQASDIDARGLLLFLASFGIPTVFTNDDLRDLLRSSNSKGLSNALCHSHCLR 268
           RLI E G  +AS+IDARGL+LF+A FGIP VF ++D+  L+  SN + + +AL  S  L 
Sbjct: 244 RLIVEGGLSKASEIDARGLILFVAGFGIPAVFRDEDIWSLVSVSNHREIFDALSQSQLLL 303

Query: 269 TRIPDIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGST 328
            R+ DI  GM +    ++AVD+ Y FG+E  + PQ  L +FLQ+ +ETWKK         
Sbjct: 304 KRVSDIADGMIRKGMVVKAVDLAYTFGLEEKYSPQTALTTFLQKSEETWKKSKQDANDFP 363

Query: 329 MQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNAS 388
             L++  E+ LA+LK V+ CLEDH +D VK LPGW++ + I NLEKDI +   ++E+ + 
Sbjct: 364 SVLKQAHEKYLAALKSVVNCLEDHNIDFVKLLPGWELKDEIINLEKDISDTNVKIEEKSM 423

Query: 389 LKRKTDE-ASTQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSS 448
           +KRK D+  S+ K    E KR+R +       V+S  +  L EQ     +   S +    
Sbjct: 424 VKRKVDKNNSSNKMKVPEAKRTRFAGR--DVSVLSPSLAALHEQRIVNRINGNSSY---E 483

Query: 449 SSMPLKLLDG------------GRASQLGNYQIASSLRGPGLVETTVLPADIIGSGISNA 508
            S+   LLDG              + QLG+  ++ SL    L  T      ++G G+  +
Sbjct: 484 GSLAAHLLDGRSYGGYPNSYLSATSIQLGS--VSDSLAEKYLGTTVASGPIMLGGGMGGS 543

Query: 509 AAPFPRGM---GWGRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQ--AMPTLATTPTP 568
            + +   M     G   +SN    + +G    L++ D  VGQSF+ Q  A+       T 
Sbjct: 544 YSGYQGDMIRDNVGTVLNSNSYRWHGVGEGASLSH-DRLVGQSFVGQSTALVNNLYGKTS 603

Query: 569 PPTTVEPYSAVYGFMGHSTSNNFDLYHFADAAVFEN 584
           P     P     G   H+  +  DLY FAD  VF++
Sbjct: 604 PEFAGVPEHPSIGASSHTGGS--DLYSFAD-GVFDS 624

The following BLAST results are available for this feature:

BLAST of CSPI04G19440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FRIGI_ARATH	1.5e-72	45.71	Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=1 SV=1	[more]
FRIG0_ARATH	5.0e-44	53.11	Inactive protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=2 SV=1	[more]
FRL3_ARATH	5.6e-27	29.41	FRIGIDA-like protein 3 OS=Arabidopsis thaliana GN=FRL3 PE=1 SV=1	[more]
FRL4B_ARATH	6.2e-18	26.28	FRIGIDA-like protein 4b OS=Arabidopsis thaliana GN=FRL4B PE=1 SV=1	[more]
FRL4A_ARATH	8.1e-18	25.62	FRIGIDA-like protein 4a OS=Arabidopsis thaliana GN=FRL4A PE=2 SV=1	[more]

BLAST of CSPI04G19440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYX9_CUCSA	0.0e+00	99.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G437530 PE=4 SV=1	[more]
A0A067JI55_JATCU	5.5e-90	43.55	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26334 PE=4 SV=1	[more]
B9RA29_RICCO	4.7e-89	40.54	Protein FRIGIDA, putative OS=Ricinus communis GN=RCOM_1502940 PE=4 SV=1	[more]
K7KLA6_SOYBN	1.0e-88	41.02	Uncharacterized protein OS=Glycine max GN=GLYMA_04G203400 PE=4 SV=1	[more]
K7KVE1_SOYBN	1.4e-88	40.92	Uncharacterized protein OS=Glycine max GN=GLYMA_06G162100 PE=4 SV=1	[more]

BLAST of CSPI04G19440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00650.1	2.8e-45	53.11	FRIGIDA-like protein	[more]
AT5G48385.1	3.2e-28	29.41	FRIGIDA-like protein	[more]
AT4G14900.1	3.5e-19	26.28	FRIGIDA-like protein	[more]
AT3G22440.1	4.6e-19	25.62	FRIGIDA-like protein	[more]
AT5G16320.1	9.5e-17	23.58	FRIGIDA like 1	[more]

BLAST of CSPI04G19440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453187\|ref\|XP_004144340.1\|	0.0e+00	99.51	PREDICTED: protein FRIGIDA [Cucumis sativus]	[more]
gi\|659069372\|ref\|XP_008449489.1\|	6.8e-307	91.07	PREDICTED: protein FRIGIDA [Cucumis melo]	[more]
gi\|225461850\|ref\|XP_002283789.1\|	8.2e-95	42.31	PREDICTED: protein FRIGIDA [Vitis vinifera]	[more]
gi\|802770094\|ref\|XP_012090538.1\|	7.9e-90	43.55	PREDICTED: protein FRIGIDA [Jatropha curcas]	[more]
gi\|950963973\|ref\|XP_014498449.1\|	2.3e-89	38.37	PREDICTED: protein FRIGIDA [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012474	Frigida

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009908	flower development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G19440.1	CSPI04G19440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012474	Frigida-like	PFAM	PF07899	Frigida	coord: 87..377 score: 1.1
None	No IPR available	PANTHER	PTHR31791	FAMILY NOT NAMED	coord: 86..541 score: 1.5E
None	No IPR available	PANTHER	PTHR31791:SF3	SUBFAMILY NOT NAMED	coord: 86..541 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G19440	Cla006106	Watermelon (97103) v1	cpiwmB341
CSPI04G19440	Csa4G437530	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G19440	MELO3C003262	Melon (DHL92) v3.5.1	cpimeB325
CSPI04G19440	ClCG04G003180	Watermelon (Charleston Gray)	cpiwcgB314
CSPI04G19440	Lsi01G020250	Bottle gourd (USVL1VR-Ls)	cpilsiB249
CSPI04G19440	MELO3C003262.2	Melon (DHL92) v3.6.1	cpimedB316
CSPI04G19440	CsaV3_4G029810	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G19440	Cucsa.169900	Cucumber (Gy14) v1	cgycpiB267
CSPI04G19440	CmaCh03G000010	Cucurbita maxima (Rimu)	cmacpiB673
CSPI04G19440	CmoCh03G000200	Cucurbita moschata (Rifu)	cmocpiB673
CSPI04G19440	Cp4.1LG10g12300	Cucurbita pepo (Zucchini)	cpecpiB067
CSPI04G19440	CsGy4G018330	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G19440	Carg26108	Silver-seed gourd	carcpiB0552

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G19440	Cucurbita maxima (Rimu)	cmacpiB886
CSPI04G19440	Cucurbita moschata (Rifu)	cmocpiB867
CSPI04G19440	Silver-seed gourd	carcpiB0513
CSPI04G19440	Watermelon (97103) v2	cpiwmbB312