CSPI04G15820 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G15820
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	30S ribosomal S31, chloroplastic-like protein
Location	Chr4 : 13134758 .. 13135738 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCGAAACTTATCTTTGTGATTCTCCCACAAGCGCTACCTCGCTCTGCTTCATCTTCATCCATCCATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTAGTATGTGTGTGTTAGCTTCAATTGAAGTATTTACATCGCTTCTGTTCACTTTTCATTGCTTAATTTCTGTTCTGTCTTTACTTTTTTTTCAGTATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGTATGTGTCTATATGTTTTCTTGAGTTTCTGTTTCTGTCTTCCATAAGTTTCTCTATCGTTTTTTATATTTTGAATTTTTTTTCGGGGGGAAAATGTTCAGGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAGTCATAGGTCATCCTAATTCTGTTTATTTGAATGTGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTTGTATGAATTCTTCAGTCGCTTATCGGCTTCATGAATTTGTTCTTCGTTTTGAGTCAACTCCAAGTACGGCCTCTCTCTCTTTTTCCTTCTATCTTTGTCTTTAACCATTTCTGAGCAAGAGTCTAAGCATCGATGCTTCATAGATAGTCATTGCGTCACTACAGGCGTTTGTTTATGGAATTTAAGTTAACTTCCGCATACATGTTATTCGAAGACTAGAGTTGAGCTATTTAATATTAACGTTAGATATAGAAAGATTCTACCAGCTCCTTGTTGGTTTT

mRNA sequence

ATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAG

Coding sequence (CDS)

ATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAG

Homology

[Close]

BLAST of CSPI04G15820 vs. Swiss-Prot
Match: RR31_ARATH (30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana GN=RPS31 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 20  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRD 79
           S S  E  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+
Sbjct: 22  SSSHSETAGVSL-SCFTHQFSLSTSSS-SSIPLVYCGRGDRKTAKGKRFNHSFGNARPRN 81

Query: 80  KTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Sbjct: 82  KSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118

[Close]

BLAST of CSPI04G15820 vs. Swiss-Prot
Match: RR31_SPIOL (30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea GN=RPS31 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRF--FSFSKCEAL-GTSLRASSTASLAISTPSSPSSIPAIYCGR 60
           MASL   LL  PS +     FSFS  +++ G SL +  T SL+ S  +SP+ +P IYCGR
Sbjct: 1   MASL---LLGTPSMACHSVSFSFSHSQSVAGVSLSSPPTLSLSSSVSTSPA-LPLIYCGR 60

Query: 61  GDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFD 103
           GD+KT +GKRFNHS+GNARP++K KGRG P+ P  P      K D
Sbjct: 61  GDRKTAKGKRFNHSFGNARPKNKNKGRGPPKAPIFPKGDPSQKED 101

[Close]

BLAST of CSPI04G15820 vs. TrEMBL
Match: A0A0A0KXY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308630 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.8e-57
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60
           MASLPFGLLQAPSQSPRFFSFSK EALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK
Sbjct: 1   MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60

Query: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
Sbjct: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 118

[Close]

BLAST of CSPI04G15820 vs. TrEMBL
Match: A0A061ERJ0_THECC (Plastid-specific ribosomal protein 4 OS=Theobroma cacao GN=TCM_047048 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-32
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRFFSFSKC-----EALGTSLRASSTASLAISTPSSPSSIPAIYC 60
           MASL  G    P+QS    S S+      + LGTSL  S T+S+++ST SSPS IP +YC
Sbjct: 1   MASLLLGAAPVPAQSVNLSSLSRISSSHSQTLGTSLSVS-TSSVSLSTASSPS-IPYVYC 60

Query: 61  GRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESL 119
           GRGDKKT++GKRFNHS+GNARPR+K KGRG PRVP PPSPPRKDKFDD+EKIKIEIDESL
Sbjct: 61  GRGDKKTKKGKRFNHSFGNARPRNKKKGRGPPRVPIPPSPPRKDKFDDDEKIKIEIDESL 120

[Close]

BLAST of CSPI04G15820 vs. TrEMBL
Match: A0A0B0NGY6_GOSAR (30S ribosomal S31, chloroplastic-like protein OS=Gossypium arboreum GN=F383_20354 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.6e-31
Identity = 82/123 (66.67%), Postives = 91/123 (73.98%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRF-----FSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYC 60
           MASL  G     +QS         S S  + LGTSL  S++ S ++S  SSPS IP +YC
Sbjct: 1   MASLLLGAAPISAQSLNLSYVSRISSSHSQTLGTSLSVSNS-SFSLSAASSPS-IPYVYC 60

Query: 61  GRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESL 119
           GRGDKKTERGKRFNHS+GNARPRDK KGRG PRVP PPSPPRKDKFDD+EKIKIEIDESL
Sbjct: 61  GRGDKKTERGKRFNHSFGNARPRDKKKGRGPPRVPVPPSPPRKDKFDDDEKIKIEIDESL 120

[Close]

BLAST of CSPI04G15820 vs. TrEMBL
Match: A0A0D2MGA3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G262200 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.3e-31
Identity = 81/123 (65.85%), Postives = 92/123 (74.80%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRFFSFSKC-----EALGTSLRASSTASLAISTPSSPSSIPAIYC 60
           MASL  G     +QS    S S+      + LGTSL  S++ S ++S  SSPS IP +YC
Sbjct: 1   MASLLLGAAPISAQSLNLSSVSRISSSHSQTLGTSLSVSNS-SFSLSAASSPS-IPYVYC 60

Query: 61  GRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESL 119
           GRGDKKTERGKRFNHS+GNARPRDK KGRG PRVP PP+PPRKDKFDD+EKIKIEIDESL
Sbjct: 61  GRGDKKTERGKRFNHSFGNARPRDKKKGRGPPRVPVPPAPPRKDKFDDDEKIKIEIDESL 120

[Close]

BLAST of CSPI04G15820 vs. TrEMBL
Match: W9S307_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015587 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-30
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRF---FSFSKCEALGTSLRASS-TASLAISTPSSPSSIPAIYCG 60
           MASL  G L  PSQS       SFS+ + L TSL + + ++S +  + +SP S P++YCG
Sbjct: 1   MASLLLGSLPIPSQSLPLASRISFSQSQTLATSLPSFALSSSFSSISATSPPSFPSVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 119
           RGDKKTERGKRFNHSYGNARPR+K KGRG PRVP PPSPPRKDKFD + KIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRNKKKGRGPPRVPVPPSPPRKDKFDSDAKIKIEIDESLF 120

[Close]

BLAST of CSPI04G15820 vs. TAIR10
Match: AT2G38140.1 (AT2G38140.1 plastid-specific ribosomal protein 4)

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 20  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRD 79
           S S  E  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+
Sbjct: 22  SSSHSETAGVSL-SCFTHQFSLSTSSS-SSIPLVYCGRGDRKTAKGKRFNHSFGNARPRN 81

Query: 80  KTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Sbjct: 82  KSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: gi|449460301|ref|XP_004147884.1| (PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-56
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60
           MASLPFGLLQAPSQSPRFFSFSK EALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK
Sbjct: 1   MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60

Query: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
Sbjct: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 118

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: gi|659069340|ref|XP_008449316.1| (PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSP----RFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           M SLPFGLLQAPSQSP     +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 119
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: gi|590628595|ref|XP_007026761.1| (Plastid-specific ribosomal protein 4 [Theobroma cacao])

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-32
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRFFSFSKC-----EALGTSLRASSTASLAISTPSSPSSIPAIYC 60
           MASL  G    P+QS    S S+      + LGTSL  S T+S+++ST SSPS IP +YC
Sbjct: 1   MASLLLGAAPVPAQSVNLSSLSRISSSHSQTLGTSLSVS-TSSVSLSTASSPS-IPYVYC 60

Query: 61  GRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESL 119
           GRGDKKT++GKRFNHS+GNARPR+K KGRG PRVP PPSPPRKDKFDD+EKIKIEIDESL
Sbjct: 61  GRGDKKTKKGKRFNHSFGNARPRNKKKGRGPPRVPIPPSPPRKDKFDDDEKIKIEIDESL 120

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: gi|728832677|gb|KHG12120.1| (30S ribosomal S31, chloroplastic -like protein [Gossypium arboreum])

HSP 1 Score: 141.7 bits (356), Expect = 8.1e-31
Identity = 82/123 (66.67%), Postives = 91/123 (73.98%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRF-----FSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYC 60
           MASL  G     +QS         S S  + LGTSL  S++ S ++S  SSPS IP +YC
Sbjct: 1   MASLLLGAAPISAQSLNLSYVSRISSSHSQTLGTSLSVSNS-SFSLSAASSPS-IPYVYC 60

Query: 61  GRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESL 119
           GRGDKKTERGKRFNHS+GNARPRDK KGRG PRVP PPSPPRKDKFDD+EKIKIEIDESL
Sbjct: 61  GRGDKKTERGKRFNHSFGNARPRDKKKGRGPPRVPVPPSPPRKDKFDDDEKIKIEIDESL 120

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: gi|823137387|ref|XP_012468485.1| (PREDICTED: 30S ribosomal protein S31, chloroplastic [Gossypium raimondii])

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 81/123 (65.85%), Postives = 92/123 (74.80%), Query Frame = 1


Query: 1   MASLPFGLLQAPSQSPRFFSFSKC-----EALGTSLRASSTASLAISTPSSPSSIPAIYC 60
           MASL  G     +QS    S S+      + LGTSL  S++ S ++S  SSPS IP +YC
Sbjct: 1   MASLLLGAAPISAQSLNLSSVSRISSSHSQTLGTSLSVSNS-SFSLSAASSPS-IPYVYC 60

Query: 61  GRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESL 119
           GRGDKKTERGKRFNHS+GNARPRDK KGRG PRVP PP+PPRKDKFDD+EKIKIEIDESL
Sbjct: 61  GRGDKKTERGKRFNHSFGNARPRDKKKGRGPPRVPVPPAPPRKDKFDDDEKIKIEIDESL 120

The following BLAST results are available for this feature:

BLAST of CSPI04G15820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RR31_ARATH	2.1e-26	64.65	30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana GN=RPS31 PE=1 S...	[more]
RR31_SPIOL	1.4e-14	50.48	30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea GN=RPS31 PE=1 SV=2	[more]

BLAST of CSPI04G15820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXY4_CUCSA	7.8e-57	99.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308630 PE=4 SV=1	[more]
A0A061ERJ0_THECC	1.7e-32	66.67	Plastid-specific ribosomal protein 4 OS=Theobroma cacao GN=TCM_047048 PE=4 SV=1	[more]
A0A0B0NGY6_GOSAR	5.6e-31	66.67	30S ribosomal S31, chloroplastic-like protein OS=Gossypium arboreum GN=F383_2035...	[more]
A0A0D2MGA3_GOSRA	7.3e-31	65.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G262200 PE=4 SV=1	[more]
W9S307_9ROSA	1.3e-30	63.93	Uncharacterized protein OS=Morus notabilis GN=L484_015587 PE=4 SV=1	[more]

BLAST of CSPI04G15820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38140.1	1.2e-27	64.65	plastid-specific ribosomal protein 4	[more]

BLAST of CSPI04G15820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460301\|ref\|XP_004147884.1\|	1.1e-56	99.15	PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis sativus]	[more]
gi\|659069340\|ref\|XP_008449316.1\|	1.1e-51	90.16	PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]	[more]
gi\|590628595\|ref\|XP_007026761.1\|	2.5e-32	66.67	Plastid-specific ribosomal protein 4 [Theobroma cacao]	[more]
gi\|728832677\|gb\|KHG12120.1\|	8.1e-31	66.67	30S ribosomal S31, chloroplastic -like protein [Gossypium arboreum]	[more]
gi\|823137387\|ref\|XP_012468485.1\|	1.1e-30	65.85	PREDICTED: 30S ribosomal protein S31, chloroplastic [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032544	plastid translation
biological_process	GO:0010311	lateral root formation
biological_process	GO:0008150	biological_process
biological_process	GO:0048829	root cap development
biological_process	GO:0009958	positive gravitropism
biological_process	GO:0048765	root hair cell differentiation
biological_process	GO:0001736	establishment of planar polarity
biological_process	GO:0060919	auxin influx
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009986	cell surface
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0010011	auxin binding
molecular_function	GO:0010328	auxin influx transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G15820.1	CSPI04G15820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34550	FAMILY NOT NAMED	coord: 30..117 score: 3.5
None	No IPR available	PANTHER	PTHR34550:SF1	30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC	coord: 30..117 score: 3.5
None	No IPR available	PFAM	PF17067	RPS31	coord: 19..99 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G15820	Cla018111	Watermelon (97103) v1	cpiwmB345
CSPI04G15820	Csa4G308630	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G15820	MELO3C003245	Melon (DHL92) v3.5.1	cpimeB322
CSPI04G15820	ClCG04G007070	Watermelon (Charleston Gray)	cpiwcgB316
CSPI04G15820	Lsi01G015400	Bottle gourd (USVL1VR-Ls)	cpilsiB247
CSPI04G15820	MELO3C003245.2	Melon (DHL92) v3.6.1	cpimedB313
CSPI04G15820	CsaV3_4G026180	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G15820	Bhi03G001678	Wax gourd	cpiwgoB395
CSPI04G15820	Cucsa.067170	Cucumber (Gy14) v1	cgycpiB055
CSPI04G15820	CmaCh07G010500	Cucurbita maxima (Rimu)	cmacpiB876
CSPI04G15820	CmoCh07G010980	Cucurbita moschata (Rifu)	cmocpiB856
CSPI04G15820	Cp4.1LG19g02810	Cucurbita pepo (Zucchini)	cpecpiB496
CSPI04G15820	Carg19994	Silver-seed gourd	carcpiB0591
CSPI04G15820	Carg13274	Silver-seed gourd	carcpiB0613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G15820	Cucumber (Gy14) v2	cgybcpiB124
CSPI04G15820	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G15820	Cucumber (Gy14) v2	cgybcpiB277
CSPI04G15820	Silver-seed gourd	carcpiB0021
CSPI04G15820	Silver-seed gourd	carcpiB0183
CSPI04G15820	Silver-seed gourd	carcpiB0294
CSPI04G15820	Silver-seed gourd	carcpiB1036
CSPI04G15820	Cucumber (Chinese Long) v3	cpicucB209
CSPI04G15820	Cucumber (Chinese Long) v3	cpicucB240
CSPI04G15820	Watermelon (97103) v2	cpiwmbB281
CSPI04G15820	Watermelon (97103) v2	cpiwmbB291
CSPI04G15820	Watermelon (97103) v2	cpiwmbB307
CSPI04G15820	Wax gourd	cpiwgoB363
CSPI04G15820	Wax gourd	cpiwgoB392
CSPI04G15820	Wild cucumber (PI 183967)	cpicpiB106
CSPI04G15820	Wild cucumber (PI 183967)	cpicpiB159
CSPI04G15820	Cucumber (Gy14) v1	cgycpiB195
CSPI04G15820	Cucumber (Gy14) v1	cgycpiB279
CSPI04G15820	Cucurbita maxima (Rimu)	cmacpiB267
CSPI04G15820	Cucurbita maxima (Rimu)	cmacpiB677
CSPI04G15820	Cucurbita maxima (Rimu)	cmacpiB851
CSPI04G15820	Cucurbita moschata (Rifu)	cmocpiB253
CSPI04G15820	Cucurbita moschata (Rifu)	cmocpiB669
CSPI04G15820	Cucurbita moschata (Rifu)	cmocpiB719
CSPI04G15820	Cucurbita moschata (Rifu)	cmocpiB835
CSPI04G15820	Cucumber (Chinese Long) v2	cpicuB177
CSPI04G15820	Cucumber (Chinese Long) v2	cpicuB197
CSPI04G15820	Melon (DHL92) v3.5.1	cpimeB282
CSPI04G15820	Melon (DHL92) v3.5.1	cpimeB287
CSPI04G15820	Watermelon (Charleston Gray)	cpiwcgB283
CSPI04G15820	Watermelon (Charleston Gray)	cpiwcgB294
CSPI04G15820	Watermelon (97103) v1	cpiwmB293
CSPI04G15820	Watermelon (97103) v1	cpiwmB358
CSPI04G15820	Cucurbita pepo (Zucchini)	cpecpiB065
CSPI04G15820	Cucurbita pepo (Zucchini)	cpecpiB499
CSPI04G15820	Cucurbita pepo (Zucchini)	cpecpiB620
CSPI04G15820	Cucurbita pepo (Zucchini)	cpecpiB872
CSPI04G15820	Bottle gourd (USVL1VR-Ls)	cpilsiB277
CSPI04G15820	Bottle gourd (USVL1VR-Ls)	cpilsiB280
CSPI04G15820	Melon (DHL92) v3.6.1	cpimedB278
CSPI04G15820	Melon (DHL92) v3.6.1	cpimedB282