CSPI04G15160 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G15160
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 12616295 .. 12616722 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACAGATTGGGCCTGTATTGCAGGTACATATTGCAATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGGTAGCCTTAACGAGGTTTTGATAGCGTATGAAATATCGCTATTCATTTTCGCTTAATTCGATTTCCATACGTGATTTTATGATATTACTTGATTTGTGTAATAGATTTTGAGCAATTCGTGGTACAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

mRNA sequence

ATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACAGATTGGGCCTGTATTGCAGGTACATATTGCAATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGATTTTGAGCAATTCGTGGTACAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

Coding sequence (CDS)

ATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACAGATTGGGCCTGTATTGCAGGTACATATTGCAATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGATTTTGAGCAATTCGTGGTACAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA
Homology
[Close]
BLAST of CSPI04G15160 vs. TrEMBL
Match: A0A0A0L133_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297520 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-44
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 1 

Query: 1   MARLLISQVETVFEIEGDDERQQIGPVLQVHIAIDITKPLCQGVCIQVDFEQFVVQFEID 60
           MARLLISQVETVFEIEGDDERQ+IGPVLQVHIAIDITKPLCQGVCIQV         EID
Sbjct: 5   MARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLN-----EID 64

Query: 61  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 108
           VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL
Sbjct: 65  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 106

[Close]
BLAST of CSPI04G15160 vs. NCBI nr
Match: gi|700199144|gb|KGN54302.1| (hypothetical protein Csa_4G297520 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 4.4e-44
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 1 

Query: 1   MARLLISQVETVFEIEGDDERQQIGPVLQVHIAIDITKPLCQGVCIQVDFEQFVVQFEID 60
           MARLLISQVETVFEIEGDDERQ+IGPVLQVHIAIDITKPLCQGVCIQV         EID
Sbjct: 5   MARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLN-----EID 64

Query: 61  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 108
           VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL
Sbjct: 65  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 106

The following BLAST results are available for this feature:
BLAST of CSPI04G15160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G15160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L133_CUCSA3.1e-4490.65Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297520 PE=4 SV=1[more]
BLAST of CSPI04G15160 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G15160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199144|gb|KGN54302.1|4.4e-4490.65hypothetical protein Csa_4G297520 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G15160.1CSPI04G15160.1mRNA