CSPI04G14580 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G14580
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCM0545.320.nc protein
LocationChr4 : 12244955 .. 12246200 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGATTTGAATTCAATGTTTTTCATTCATGAACCTCCTCTTCTGCAGCCACCTCCTTTGACCTGACGTTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGAATGCTAAATGCTAGAGTTGGATTGCTGGAAAATCGGGACTTTCCTGGATCAATTTCCTTCAACACTTTACCTACTGGATCTCCCATCTCCTTCACTGACTCTTCGGTTCTTGACTCTGAGGTAATGTTTCACTTTTTTTTTTTTGCCTCAATTCTTTTTTTAGTACATCTGGGGATAGGATCGGACCTTCAACCACGAGGGAGCAAAGTGGTGTCAATTATCTTTTGCTTTTTCCCTTCAAATTCTGTGCTTCAATTCCCCTTTGTTTCTGATTGGATTACAGTCAAGCGGGTCATTCTTCCATTCTAAAAGCATCACTCTGGGTAGCCTAATCGGTGGTTCTACTTCTAACATCATGGAACTCACAAGAAGACCGTCAAGAGAAGGTAGCACAGAAGCCAGCCTAGGAGTTGACAGAAAGATCAATAACTACTTCAAGTTGAAGTCCAAGCCATGGCTGTTTTCCCTGTGCTGCAAACTGAGCACCGATGCCGTGATCGCCACTAGAACTCACTCGCTGGCTCACTTTCTAGAATTGGAGAGGAAACGAACTGCCACCGTAGCTGCCGCCCACCCTCGGCCAATTGTCGGAAGATCCAGCAATATTTTAACCAGTTGAAACACTGTTTTCATTAGTCAATGGCAAAGAGCAAATAGGAAGAGGCCAAGGAGAGTGGTTAATCGGTGGGGAAAATGGGAATGGGGTTCTTTGATGTTGTTTTCATCCTCTGCCTTCAGACAAAATTATTAGGCTGCCATTCATAATACCGTTAAATGTGCCAGTAGTGAGATGCTTTTCTGGGTCTTCATCAACTGTTTTGAGATCTGACTCTGATCTCTTAAATCAGGTACTCAACAACCCCTTACTTTAAAATTGTTTGTTACATCTCTTGTTTTTGCATATTAATTACTCGTTTGAGTTTTACTTTCTTGCCTCTGTTCATTTCAATTTGAAAACGGAAAGTA

mRNA sequence

ATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGAATGCTAAATGCTAGAGTTGGATTGCTGGAAAATCGGGACTTTCCTGGATCAATTTCCTTCAACACTTTACCTACTGGATCTCCCATCTCCTTCACTGACTCTTCGGTTCTTGACTCTGAGTCAAGCGGGTCATTCTTCCATTCTAAAAGCATCACTCTGGGTAGCCTAATCGGTGGTTCTACTTCTAACATCATGGAACTCACAAGAAGACCGTCAAGAGAAGGTAGCACAGAAGCCAGCCTAGGAGTTGACAGAAAGATCAATAACTACTTCAAGTTGAAGTCCAAGCCATGGCTGTTTTCCCTGTGCTGCAAACTGAGCACCGATGCCGTGATCGCCACTAGAACTCACTCGCTGGCTCACTTTCTAGAATTGGAGAGGAAACGAACTGCCACCGTAGCTGCCGCCCACCCTCGGCCAATTGTCGGAAGATCCAGCAATATTTTAACCAGTTGA

Coding sequence (CDS)

ATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGAATGCTAAATGCTAGAGTTGGATTGCTGGAAAATCGGGACTTTCCTGGATCAATTTCCTTCAACACTTTACCTACTGGATCTCCCATCTCCTTCACTGACTCTTCGGTTCTTGACTCTGAGTCAAGCGGGTCATTCTTCCATTCTAAAAGCATCACTCTGGGTAGCCTAATCGGTGGTTCTACTTCTAACATCATGGAACTCACAAGAAGACCGTCAAGAGAAGGTAGCACAGAAGCCAGCCTAGGAGTTGACAGAAAGATCAATAACTACTTCAAGTTGAAGTCCAAGCCATGGCTGTTTTCCCTGTGCTGCAAACTGAGCACCGATGCCGTGATCGCCACTAGAACTCACTCGCTGGCTCACTTTCTAGAATTGGAGAGGAAACGAACTGCCACCGTAGCTGCCGCCCACCCTCGGCCAATTGTCGGAAGATCCAGCAATATTTTAACCAGTTGA
Homology
[Close]
BLAST of CSPI04G14580 vs. TrEMBL
Match: A0A0A0KX74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G295490 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.9e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH 86
           MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH
Sbjct: 1   MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH 60

Query: 87  SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS 146
           SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS
Sbjct: 61  SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS 120

Query: 147 TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 191
           TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS
Sbjct: 121 TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 164

[Close]
BLAST of CSPI04G14580 vs. TrEMBL
Match: A0A067KHA8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09059 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 90/142 (63.38%), Postives = 104/142 (73.24%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDS-SVLDSESSGSFF 86
           MA Q++GWPLGLR +NARVG + NRDF GSISF+TL TGSP SFTDS S LD+ES+GSFF
Sbjct: 1   MALQEEGWPLGLRPVNARVGFVRNRDFNGSISFSTLLTGSPSSFTDSTSDLDTESTGSFF 60

Query: 87  HSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKL 146
           H KSITLGSLIG   S+I+EL+RR +R  + E S   D+K N     K K WL SLC KL
Sbjct: 61  HDKSITLGSLIG--VSSILELSRRSTRRRTAEPSR--DQKNN----CKPKTWLLSLCSKL 120

Query: 147 STDAVIATRTHSLAHFLELERK 168
           STDAV      SL HFLE+ERK
Sbjct: 121 STDAVKTDNVSSLGHFLEVERK 134

[Close]
BLAST of CSPI04G14580 vs. TrEMBL
Match: V4URZ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012740mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-34
Identity = 91/157 (57.96%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFT-DSSVLDSESSGSFF 86
           MA+Q+DGWPLGLR LNARVGL+ NR+  GS+SFNTL TGSP S T  SS LD+ES+GSFF
Sbjct: 1   MARQEDGWPLGLRPLNARVGLVGNRNLSGSVSFNTLLTGSPSSSTLSSSDLDTESTGSFF 60

Query: 87  HSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKL 146
             KSITLGSLIG   SNI+EL+RR +R   T+      R   NY   K +PWLFSLC KL
Sbjct: 61  RDKSITLGSLIG--VSNILELSRRSTRRRPTDTL----RDQKNY---KPRPWLFSLCSKL 120

Query: 147 STDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVG 183
           +TDAV    T SL HFLE ER+  +     H   I G
Sbjct: 121 TTDAVNTNNTPSLGHFLEAERRAASICRRNHSPAIYG 148

[Close]
BLAST of CSPI04G14580 vs. TrEMBL
Match: A0A067E7L3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028212mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-34
Identity = 91/157 (57.96%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFT-DSSVLDSESSGSFF 86
           MA+Q+DGWPLGLR LNARVGL+ NR+  GS+SFNTL TGSP S T  SS LD+ES+GSFF
Sbjct: 1   MARQEDGWPLGLRPLNARVGLVGNRNLSGSVSFNTLLTGSPSSSTLSSSDLDTESTGSFF 60

Query: 87  HSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKL 146
             KSITLGSLIG   SNI+EL+RR +R   T+      R   NY   K +PWLFSLC KL
Sbjct: 61  RDKSITLGSLIG--VSNILELSRRSTRRRPTDTL----RDQKNY---KPRPWLFSLCSKL 120

Query: 147 STDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVG 183
           +TDAV    T SL HFLE ER+  +     H   I G
Sbjct: 121 TTDAVNTNNTPSLGHFLEAERRAASICRRNHSPAIYG 148

[Close]
BLAST of CSPI04G14580 vs. TrEMBL
Match: B9HBK8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s08460g PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 87/146 (59.59%), Postives = 105/146 (71.92%), Query Frame = 1 

Query: 29  QQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSV-LDSESSGSFFHS 88
           QQ+DGWPLGLR LNARVGL+ NRDF GSISF+TL T S  SFTDSS  LD+ES+GSFFH 
Sbjct: 7   QQEDGWPLGLRPLNARVGLVRNRDFNGSISFSTLLTASNSSFTDSSSDLDTESTGSFFHD 66

Query: 89  KSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLST 148
           KS+TLGSLIG   S+I+EL+RR +R  +TE      R+  NY   KSKPW+FS+C +LS 
Sbjct: 67  KSLTLGSLIG--VSSILELSRRSTRGRTTETL----REQKNY---KSKPWMFSICSRLSP 126

Query: 149 DAV-IATRTHSLAHFLELERKRTATV 173
           D V       SL HFLE+ER+  A +
Sbjct: 127 DVVNTNNNAPSLGHFLEVERRAAANI 143

[Close]
BLAST of CSPI04G14580 vs. TAIR10
Match: AT5G02440.1 (AT5G02440.1 unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23
Identity = 68/175 (38.86%), Postives = 97/175 (55.43%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLL---------ENRDFPGSISFNTLPTGSPISFTDSSVLD 86
           MA Q++GWPLGLR +NAR+G L           +   GSISF++L + SP S   SS LD
Sbjct: 1   MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSS-QSSSDLD 60

Query: 87  SESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPW 146
           S+S GSFF  +S TLG+LIG   S+ +EL+RR +R  + +     + + +   K   KPW
Sbjct: 61  SQSMGSFFRDRSYTLGNLIG--ISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPW 120

Query: 147 LFSLCCKLSTDAVIAT-------------RTHSLAHFLELERKRTATVAAAHPRP 180
           +FS+C KLST+A + +                SL HFL +ER+   +   + P P
Sbjct: 121 IFSICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRSTPTP 172

[Close]
BLAST of CSPI04G14580 vs. NCBI nr
Match: gi|778693404|ref|XP_004142071.2| (PREDICTED: uncharacterized protein LOC101214483 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 2.6e-100
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1 

Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL
Sbjct: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI
Sbjct: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180

Query: 181 VGRSSNILTS 191
           VGRSSNILTS
Sbjct: 181 VGRSSNILTS 190

[Close]
BLAST of CSPI04G14580 vs. NCBI nr
Match: gi|659069024|ref|XP_008447773.1| (PREDICTED: uncharacterized protein LOC103490160 [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 8.2e-94
Identity = 179/190 (94.21%), Postives = 184/190 (96.84%), Query Frame = 1 

Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           M+TRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 1   MLTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKS TLGSL+GGSTSNIMEL+RR SREGSTEASL
Sbjct: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASL 120

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFK KSK WLFSLCCKLSTDAVIATRTHSLAHFLELERKRTAT AAAHPRPI
Sbjct: 121 GVDRKINNYFKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATGAAAHPRPI 180

Query: 181 VGRSSNILTS 191
           VGRS++ LTS
Sbjct: 181 VGRSNDNLTS 190

[Close]
BLAST of CSPI04G14580 vs. NCBI nr
Match: gi|700199087|gb|KGN54245.1| (hypothetical protein Csa_4G295490 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 4.1e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH 86
           MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH
Sbjct: 1   MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH 60

Query: 87  SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS 146
           SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS
Sbjct: 61  SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS 120

Query: 147 TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 191
           TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS
Sbjct: 121 TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 164

[Close]
BLAST of CSPI04G14580 vs. NCBI nr
Match: gi|802614948|ref|XP_012074920.1| (PREDICTED: uncharacterized protein At3g17950-like [Jatropha curcas])

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 90/142 (63.38%), Postives = 104/142 (73.24%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDS-SVLDSESSGSFF 86
           MA Q++GWPLGLR +NARVG + NRDF GSISF+TL TGSP SFTDS S LD+ES+GSFF
Sbjct: 1   MALQEEGWPLGLRPVNARVGFVRNRDFNGSISFSTLLTGSPSSFTDSTSDLDTESTGSFF 60

Query: 87  HSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKL 146
           H KSITLGSLIG   S+I+EL+RR +R  + E S   D+K N     K K WL SLC KL
Sbjct: 61  HDKSITLGSLIG--VSSILELSRRSTRRRTAEPSR--DQKNN----CKPKTWLLSLCSKL 120

Query: 147 STDAVIATRTHSLAHFLELERK 168
           STDAV      SL HFLE+ERK
Sbjct: 121 STDAVKTDNVSSLGHFLEVERK 134

[Close]
BLAST of CSPI04G14580 vs. NCBI nr
Match: gi|567872959|ref|XP_006429069.1| (hypothetical protein CICLE_v10012740mg [Citrus clementina])

HSP 1 Score: 152.9 bits (385), Expect = 5.6e-34
Identity = 91/157 (57.96%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFT-DSSVLDSESSGSFF 86
           MA+Q+DGWPLGLR LNARVGL+ NR+  GS+SFNTL TGSP S T  SS LD+ES+GSFF
Sbjct: 1   MARQEDGWPLGLRPLNARVGLVGNRNLSGSVSFNTLLTGSPSSSTLSSSDLDTESTGSFF 60

Query: 87  HSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKL 146
             KSITLGSLIG   SNI+EL+RR +R   T+      R   NY   K +PWLFSLC KL
Sbjct: 61  RDKSITLGSLIG--VSNILELSRRSTRRRPTDTL----RDQKNY---KPRPWLFSLCSKL 120

Query: 147 STDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVG 183
           +TDAV    T SL HFLE ER+  +     H   I G
Sbjct: 121 TTDAVNTNNTPSLGHFLEAERRAASICRRNHSPAIYG 148

The following BLAST results are available for this feature:
BLAST of CSPI04G14580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G14580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KX74_CUCSA2.9e-85100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G295490 PE=4 SV=1[more]
A0A067KHA8_JATCU2.3e-3463.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09059 PE=4 SV=1[more]
V4URZ4_9ROSI3.9e-3457.96Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012740mg PE=4 SV=1[more]
A0A067E7L3_CITSI3.9e-3457.96Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028212mg PE=4 SV=1[more]
B9HBK8_POPTR1.3e-3259.59Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s08460g PE=4 SV=1[more]
BLAST of CSPI04G14580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G02440.12.8e-2338.86 unknown protein[more]
BLAST of CSPI04G14580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778693404|ref|XP_004142071.2|2.6e-100100.00PREDICTED: uncharacterized protein LOC101214483 [Cucumis sativus][more]
gi|659069024|ref|XP_008447773.1|8.2e-9494.21PREDICTED: uncharacterized protein LOC103490160 [Cucumis melo][more]
gi|700199087|gb|KGN54245.1|4.1e-85100.00hypothetical protein Csa_4G295490 [Cucumis sativus][more]
gi|802614948|ref|XP_012074920.1|3.3e-3463.38PREDICTED: uncharacterized protein At3g17950-like [Jatropha curcas][more]
gi|567872959|ref|XP_006429069.1|5.6e-3457.96hypothetical protein CICLE_v10012740mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14580.2CSPI04G14580.2mRNA
CSPI04G14580.1CSPI04G14580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33544FAMILY NOT NAMEDcoord: 1..141
score: 2.7
NoneNo IPR availablePANTHERPTHR33544:SF3SUBFAMILY NOT NAMEDcoord: 1..141
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G14580Cla017893Watermelon (97103) v1cpiwmB292
CSPI04G14580Cla013301Watermelon (97103) v1cpiwmB354
CSPI04G14580Cla018216Watermelon (97103) v1cpiwmB345
CSPI04G14580Csa6G190490Cucumber (Chinese Long) v2cpicuB202
CSPI04G14580Csa3G734280Cucumber (Chinese Long) v2cpicuB178
CSPI04G14580Csa4G295490Cucumber (Chinese Long) v2cpicuB181
CSPI04G14580MELO3C003124Melon (DHL92) v3.5.1cpimeB322
CSPI04G14580MELO3C009262Melon (DHL92) v3.5.1cpimeB288
CSPI04G14580MELO3C025924Melon (DHL92) v3.5.1cpimeB266
CSPI04G14580ClCG10G021090Watermelon (Charleston Gray)cpiwcgB282
CSPI04G14580ClCG04G008250Watermelon (Charleston Gray)cpiwcgB316
CSPI04G14580ClCG02G020230Watermelon (Charleston Gray)cpiwcgB304
CSPI04G14580Lsi01G014200Bottle gourd (USVL1VR-Ls)cpilsiB247
CSPI04G14580Lsi03G021050Bottle gourd (USVL1VR-Ls)cpilsiB276
CSPI04G14580Lsi10G013710Bottle gourd (USVL1VR-Ls)cpilsiB246
CSPI04G14580MELO3C003124.2Melon (DHL92) v3.6.1cpimedB313
CSPI04G14580MELO3C025924.2Melon (DHL92) v3.6.1cpimedB262
CSPI04G14580MELO3C009262.2Melon (DHL92) v3.6.1cpimedB282
CSPI04G14580CsaV3_6G016930Cucumber (Chinese Long) v3cpicucB243
CSPI04G14580CsaV3_3G034940Cucumber (Chinese Long) v3cpicucB209
CSPI04G14580CsaV3_4G024920Cucumber (Chinese Long) v3cpicucB212
CSPI04G14580Cla97C10G204320Watermelon (97103) v2cpiwmbB280
CSPI04G14580Cla97C02G046190Watermelon (97103) v2cpiwmbB295
CSPI04G14580Cla97C04G074930Watermelon (97103) v2cpiwmbB307
CSPI04G14580BhiUN66G15Wax gourdcpiwgoB416
CSPI04G14580Bhi11G001870Wax gourdcpiwgoB359
CSPI04G14580Bhi10G000559Wax gourdcpiwgoB393
CSPI04G14580Cucsa.066130Cucumber (Gy14) v1cgycpiB055
CSPI04G14580Cucsa.175410Cucumber (Gy14) v1cgycpiB279
CSPI04G14580CmaCh02G008070Cucurbita maxima (Rimu)cmacpiB613
CSPI04G14580CmaCh14G001540Cucurbita maxima (Rimu)cmacpiB266
CSPI04G14580CmaCh20G004070Cucurbita maxima (Rimu)cmacpiB555
CSPI04G14580CmaCh07G009810Cucurbita maxima (Rimu)cmacpiB876
CSPI04G14580CmoCh14G001440Cucurbita moschata (Rifu)cmocpiB254
CSPI04G14580CmoCh02G008080Cucurbita moschata (Rifu)cmocpiB605
CSPI04G14580CmoCh20G004480Cucurbita moschata (Rifu)cmocpiB545
CSPI04G14580CmoCh07G010330Cucurbita moschata (Rifu)cmocpiB856
CSPI04G14580Cp4.1LG19g04550Cucurbita pepo (Zucchini)cpecpiB497
CSPI04G14580Cp4.1LG16g06020Cucurbita pepo (Zucchini)cpecpiB281
CSPI04G14580Cp4.1LG05g09180Cucurbita pepo (Zucchini)cpecpiB729
CSPI04G14580Cp4.1LG03g02340Cucurbita pepo (Zucchini)cpecpiB621
CSPI04G14580CsGy6G014400Cucumber (Gy14) v2cgybcpiB280
CSPI04G14580CsGy4G014060Cucumber (Gy14) v2cgybcpiB170
CSPI04G14580Carg03311Silver-seed gourdcarcpiB0367
CSPI04G14580Carg20290Silver-seed gourdcarcpiB0339
CSPI04G14580Carg12552Silver-seed gourdcarcpiB1037
CSPI04G14580Carg24371Silver-seed gourdcarcpiB0511
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI04G14580CSPI06G14540Wild cucumber (PI 183967)cpicpiB164
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G14580Silver-seed gourdcarcpiB0184
CSPI04G14580Silver-seed gourdcarcpiB0970
CSPI04G14580Cucumber (Chinese Long) v3cpicucB231
CSPI04G14580Cucumber (Chinese Long) v3cpicucB201
CSPI04G14580Cucumber (Chinese Long) v3cpicucB232
CSPI04G14580Watermelon (97103) v2cpiwmbB298
CSPI04G14580Watermelon (97103) v2cpiwmbB347
CSPI04G14580Wax gourdcpiwgoB395
CSPI04G14580Wild cucumber (PI 183967)cpicpiB024
CSPI04G14580Wild cucumber (PI 183967)cpicpiB107
CSPI04G14580Wild cucumber (PI 183967)cpicpiB152
CSPI04G14580Wild cucumber (PI 183967)cpicpiB153
CSPI04G14580Cucumber (Gy14) v1cgycpiB257
CSPI04G14580Cucurbita maxima (Rimu)cmacpiB677
CSPI04G14580Cucurbita maxima (Rimu)cmacpiB852
CSPI04G14580Cucurbita moschata (Rifu)cmocpiB669
CSPI04G14580Cucurbita moschata (Rifu)cmocpiB834
CSPI04G14580Watermelon (Charleston Gray)cpiwcgB277
CSPI04G14580Cucumber (Chinese Long) v2cpicuB170
CSPI04G14580Cucumber (Chinese Long) v2cpicuB191
CSPI04G14580Cucumber (Chinese Long) v2cpicuB192
CSPI04G14580Melon (DHL92) v3.5.1cpimeB263
CSPI04G14580Melon (DHL92) v3.5.1cpimeB264
CSPI04G14580Watermelon (Charleston Gray)cpiwcgB307
CSPI04G14580Watermelon (97103) v1cpiwmB287
CSPI04G14580Watermelon (97103) v1cpiwmB305
CSPI04G14580Cucurbita pepo (Zucchini)cpecpiB065
CSPI04G14580Cucurbita pepo (Zucchini)cpecpiB873
CSPI04G14580Bottle gourd (USVL1VR-Ls)cpilsiB267
CSPI04G14580Bottle gourd (USVL1VR-Ls)cpilsiB271
CSPI04G14580Melon (DHL92) v3.6.1cpimedB259
CSPI04G14580Melon (DHL92) v3.6.1cpimedB260
CSPI04G14580Cucumber (Gy14) v2cgybcpiB124
CSPI04G14580Cucumber (Gy14) v2cgybcpiB219
CSPI04G14580Cucumber (Gy14) v2cgybcpiB220