CSPI04G14000 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G14000
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description60S ribosomal protein L4
LocationChr4 : 11884998 .. 11887192 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCTTATATTCACATATATATATATATAAACACGAAGCCTCAAAACCCTAATTCTTTCGCTTCGTTTTCCCCCTCTGTTCTGCACTTCACACACAATCACTCTCCAATGGCCGCTGCCGCCCGCCCCTTGGTCTCCGTCCAGTCCCTTGAAGGGGACATGGCTACCGATGCAGCGCCCACCGTCCCGCTTCCGGACGTCATGAAGGCTTCAATTCGTCCGGACATTGTTAGCTTTGTCCATTCCAATATCTCCAAAAACAGCCGTCAGCCTTACGCCGTCAGCAAGCGCGCCGGTCATCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCACGTGTTCCTGGTGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGTTGGCACCGTAAGATCAATGTGAACCAGAAGAGGTATGCTGTTGTTTCGGCCATCGCTGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGTGGTCATCGAATTGAAACTGTCCCTGAATTGCCCCTTGTTGTGAGTGACTCGGCTGAAGGTGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCTGATGCTGAGAAGGCTAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAATCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCTGGTGTTGAGATTGCTAACGTTGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGGCATCTTGGGAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGTCTTCAGAGAAGAAGAAGGGTTATGTCCTTCCTAGGTCTAAGATGGTGAATGCTGATTTGTCAAGGATTATTAACTCTGATGAAGTTCAATCTGTTGTGAAGCCGATTAAGAAGAATGTTAAGAGACCTCAATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAAACTGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTTAAGGCGAAAAAGGAGAAACTCGACAAGAAGAGGAATTTAACTACAAAGGTATACTTTTTTGCGTTCTTTGTGAGATCATTTGGATACTGCTCGTCGATTGTTATTTACATTCTTTTGGAAATCAAGTATTGAATATGTTCGTCTTAGATTGACTTGCCTTCAAGTACTTCTAATTATTTGTTTCTTTTGGTGTTGGTTTTCGTTATTTGTTATAGAATGATTTGTAATCAAAATGTTGATTATAGTTTGAATTATGAGATGCTTATATGCTAAAACTGACGAGATGGGTTGGATTCTCCATCACTTTTTTTTTTGTGTGCTTGCCTCAGTCTTTTTAGTACTAGTAATTTACCATAACCCATTAGTCTAATCTTTTTGGTCGATTGATGATTTACTGTTTGTTTTATCTTCTCGAGGATGTTTTTTCCTTCAAAATTTGTGTACTCTGTATTTCTCTTTTCAAACCAAAATCATGGATACCTGTGACCACAAGTTGTGTTTAATAAGGTGGTACAATTGTTCATATTAACTGCATTTTGTTATTATAGAACATCCTAACCTCGGTGTTGATTTTCTTTTCCCCCTTTTGTACATGAACTCACAGGAGGATGCAACTGCTATCAGAGCCGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGCGATTACACAGAGTTTGAGAACTTCTCAAAATGGCTTGGTGTTTCCCAGTAATTTCGTTTTTCTTTATTGAAAATCTCATAGACCTTAATTACTTTTGTTAATCTATTTTGCCAAGGAGTTGTTATTCTTGCTTTTGATTGTTATTGCGTTTATGAAGGGAAGTAGTTTGGGAGAACAAAGAGTGAAATAACATAGATAATTAACTTTTGCCGTTTTGCTCTCCCGTTTTTCTCTAGATTGCTTCTCTTTGTTAGTTAAACCGAAATTACAAATGAGTGCAGCCTTATATCATTTCTTCCTTATGATGTTATATGCACTGTGATATGCTTATCTTCTGTTTTTCAATGGCATATTAATTTTCCGG

mRNA sequence

ATGGCCGCTGCCGCCCGCCCCTTGGTCTCCGTCCAGTCCCTTGAAGGGGACATGGCTACCGATGCAGCGCCCACCGTCCCGCTTCCGGACGTCATGAAGGCTTCAATTCGTCCGGACATTGTTAGCTTTGTCCATTCCAATATCTCCAAAAACAGCCGTCAGCCTTACGCCGTCAGCAAGCGCGCCGGTCATCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCACGTGTTCCTGGTGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGTTGGCACCGTAAGATCAATGTGAACCAGAAGAGGTATGCTGTTGTTTCGGCCATCGCTGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGTGGTCATCGAATTGAAACTGTCCCTGAATTGCCCCTTGTTGTGAGTGACTCGGCTGAAGGTGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCTGATGCTGAGAAGGCTAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAATCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCTGGTGTTGAGATTGCTAACGTTGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGGCATCTTGGGAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGTCTTCAGAGAAGAAGAAGGGTTATGTCCTTCCTAGGTCTAAGATGGTGAATGCTGATTTGTCAAGGATTATTAACTCTGATGAAGTTCAATCTGTTGTGAAGCCGATTAAGAAGAATGTTAAGAGACCTCAATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAAACTGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTTAAGGCGAAAAAGGAGAAACTCGACAAGAAGAGGAATTTAACTACAAAGGAGGATGCAACTGCTATCAGAGCCGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGCGATTACACAGAGTTTGAGAACTTCTCAAAATGGCTTGGTGTTTCCCAGTAA

Coding sequence (CDS)

ATGGCCGCTGCCGCCCGCCCCTTGGTCTCCGTCCAGTCCCTTGAAGGGGACATGGCTACCGATGCAGCGCCCACCGTCCCGCTTCCGGACGTCATGAAGGCTTCAATTCGTCCGGACATTGTTAGCTTTGTCCATTCCAATATCTCCAAAAACAGCCGTCAGCCTTACGCCGTCAGCAAGCGCGCCGGTCATCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCACGTGTTCCTGGTGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGTTGGCACCGTAAGATCAATGTGAACCAGAAGAGGTATGCTGTTGTTTCGGCCATCGCTGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGTGGTCATCGAATTGAAACTGTCCCTGAATTGCCCCTTGTTGTGAGTGACTCGGCTGAAGGTGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCTGATGCTGAGAAGGCTAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAATCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCTGGTGTTGAGATTGCTAACGTTGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGGCATCTTGGGAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGTCTTCAGAGAAGAAGAAGGGTTATGTCCTTCCTAGGTCTAAGATGGTGAATGCTGATTTGTCAAGGATTATTAACTCTGATGAAGTTCAATCTGTTGTGAAGCCGATTAAGAAGAATGTTAAGAGACCTCAATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAAACTGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTTAAGGCGAAAAAGGAGAAACTCGACAAGAAGAGGAATTTAACTACAAAGGAGGATGCAACTGCTATCAGAGCCGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGCGATTACACAGAGTTTGAGAACTTCTCAAAATGGCTTGGTGTTTCCCAGTAA
Homology
[Close]
BLAST of CSPI04G14000 vs. Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 4.8e-200
Identity = 357/404 (88.37%), Postives = 383/404 (94.80%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV+VQSLEGDMATD   TV LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK+
Sbjct: 5   AAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKK 64

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 65  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 124

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           NQKRYAVVSAIAASAVPSLVLARGH+IETVPELPLVVSDS EGVE+TSAA+KVLKQ+GA+
Sbjct: 125 NQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGAY 184

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERLN
Sbjct: 185 SDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLN 244

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADL+RIINSD
Sbjct: 245 LLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSD 304

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PI++  KR  LKKNPL+ LN MLKLNPYAKTARRM+LLAE +RVKAKKEKLDK
Sbjct: 305 EVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDK 364

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   +KE+A+ I+AAGKAWYQTMISDSDYTEF+NF+KWLGVSQ
Sbjct: 365 KRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]
BLAST of CSPI04G14000 vs. Swiss-Prot
Match: RL4A_ARATH (60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 4.0e-191
Identity = 335/404 (82.92%), Postives = 376/404 (93.07%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKE+A AI+AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]
BLAST of CSPI04G14000 vs. Swiss-Prot
Match: RL4B_ARATH (60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=2 SV=2)

HSP 1 Score: 666.0 bits (1717), Expect = 2.6e-190
Identity = 335/404 (82.92%), Postives = 373/404 (92.33%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKE+A AI+AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]
BLAST of CSPI04G14000 vs. Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 438.7 bits (1127), Expect = 6.8e-122
Identity = 221/358 (61.73%), Postives = 280/358 (78.21%), Query Frame = 1 

Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+    +   V +P V +A IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           +Q  ++   K VKR +LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]
BLAST of CSPI04G14000 vs. Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B OS=Xenopus laevis GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 438.3 bits (1126), Expect = 8.9e-122
Identity = 220/358 (61.45%), Postives = 280/358 (78.21%), Query Frame = 1 

Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+ +      V +P V KA IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGETS---GKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           +Q  ++   K VKR +LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]
BLAST of CSPI04G14000 vs. TrEMBL
Match: A0A0A0L0Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292970 PE=4 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 3.1e-222
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. TrEMBL
Match: A0A0A0LDW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736750 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 4.6e-210
Identity = 377/405 (93.09%), Postives = 394/405 (97.28%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLV+VQ LEGDMATD++PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASA+PSLVLARGHRIE+VPELPLV+SDSAEG+EKTS+AIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
            PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPG++I NVERL
Sbjct: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK VKRP LKKNPLKNLNAMLKLNPYAKTARRM+LLAE QRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKR +  KEDA A++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. TrEMBL
Match: A0A0S3SSP9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G264300 PE=4 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 1.5e-205
Identity = 367/405 (90.62%), Postives = 389/405 (96.05%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLV++QSLEGDMATDA+ TVP+PDVM+ASIRPDIV+FVHSNISKNSRQPYAVS+
Sbjct: 1   MAAAARPLVTIQSLEGDMATDASATVPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAI+ASA+PSLVLARGHRIETVPELPLVVSDSAEGVEKT  AIKVLKQ+GA
Sbjct: 121 VNQKRYAVVSAISASAIPSLVLARGHRIETVPELPLVVSDSAEGVEKTKEAIKVLKQIGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH IRPGKGKMRNRRYISRKGPLIVYGTEGAK VKAFRN+PGVE+ANVERL
Sbjct: 181 FPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNVPGVEVANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSF+K SEKKKGY+LPRSKMVN+DLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+V R  LKKNPLKNLN MLKLNPYAKTA+RMALLAE QRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKDVTRATLKKNPLKNLNVMLKLNPYAKTAKRMALLAEAQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKR   +KE+A+ IRAAGKAWY TM+SDSDYTEF+NFSKWLGVSQ
Sbjct: 361 KKRKTVSKEEASTIRAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. TrEMBL
Match: A0A0B0PKI8_GOSAR (60S ribosomal L4 OS=Gossypium arboreum GN=F383_00247 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 2.6e-205
Identity = 368/405 (90.86%), Postives = 387/405 (95.56%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQ+LE DMATDA PTVPL DVMKASIRPDIV+FVH NISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQTLESDMATDATPTVPLADVMKASIRPDIVTFVHDNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAV SAIAASAVPSLV+ARGHRIE+VPE+PLV+SDS E VEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVASAIAASAVPSLVMARGHRIESVPEMPLVISDSVESVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           +PD EKAKDSH IRPGKGKMRNRRYISRKGPLIVYGTEG+KLVKAFRNIPGVE+ANVERL
Sbjct: 181 YPDVEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGSKLVKAFRNIPGVEVANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRF+IWTKSA+EKLDS+YGSFEK SEKKKGYVLPRSKMVNADL RIINS
Sbjct: 241 NLLKLAPGGHLGRFIIWTKSAYEKLDSVYGSFEKPSEKKKGYVLPRSKMVNADLGRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK +KR  LKKNPLKNLNAMLKLNPYAKTARRM+LLAE QRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEIKRAPLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKR   +KE+ATAI++AGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRKPISKEEATAIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. TrEMBL
Match: A0A0B0NP69_GOSAR (60S ribosomal L4 OS=Gossypium arboreum GN=F383_05206 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 2.2e-204
Identity = 367/404 (90.84%), Postives = 386/404 (95.54%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVSVQ++E DMATDA PTVPL DVMKASIRPDIV+FVH NISKNSRQPYAVSKR
Sbjct: 3   AAAARPLVSVQTIESDMATDATPTVPLADVMKASIRPDIVTFVHDNISKNSRQPYAVSKR 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           NQKRYAV SAIAASAVPSLV+ARGHRIE+VPE+PLV+SD+AE VEKTSAAIKVLKQVGA+
Sbjct: 123 NQKRYAVASAIAASAVPSLVMARGHRIESVPEMPLVISDAAESVEKTSAAIKVLKQVGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
           PD EKAKDS  IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVE+ANVERLN
Sbjct: 183 PDVEKAKDSQGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRF+IWTKSA+EKLDSIYGSFEK SEKKKGY+LPRSKMVNADL RIINSD
Sbjct: 243 LLKLAPGGHLGRFIIWTKSAYEKLDSIYGSFEKPSEKKKGYILPRSKMVNADLGRIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVVKPIKK +KR  LKKNPLKNLNAMLKLNPYAKTARRM+LLAE QRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKEIKRAPLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   +KE+ATAI++AGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 363 KRKPISKEEATAIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]
BLAST of CSPI04G14000 vs. TAIR10
Match: AT3G09630.1 (AT3G09630.1 Ribosomal protein L4/L1 family)

HSP 1 Score: 668.7 bits (1724), Expect = 2.3e-192
Identity = 335/404 (82.92%), Postives = 376/404 (93.07%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKE+A AI+AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]
BLAST of CSPI04G14000 vs. TAIR10
Match: AT5G02870.1 (AT5G02870.1 Ribosomal protein L4/L1 family)

HSP 1 Score: 666.0 bits (1717), Expect = 1.5e-191
Identity = 335/404 (82.92%), Postives = 373/404 (92.33%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKE+A AI+AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]
BLAST of CSPI04G14000 vs. NCBI nr
Match: gi|449448709|ref|XP_004142108.1| (PREDICTED: 60S ribosomal protein L4 [Cucumis sativus])

HSP 1 Score: 778.9 bits (2010), Expect = 4.4e-222
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. NCBI nr
Match: gi|659096785|ref|XP_008449286.1| (PREDICTED: 60S ribosomal protein L4-like [Cucumis melo])

HSP 1 Score: 773.5 bits (1996), Expect = 1.9e-220
Identity = 402/405 (99.26%), Postives = 403/405 (99.51%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. NCBI nr
Match: gi|449440055|ref|XP_004137800.1| (PREDICTED: 60S ribosomal protein L4 [Cucumis sativus])

HSP 1 Score: 738.4 bits (1905), Expect = 6.6e-210
Identity = 377/405 (93.09%), Postives = 394/405 (97.28%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLV+VQ LEGDMATD++PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASA+PSLVLARGHRIE+VPELPLV+SDSAEG+EKTS+AIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
            PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPG++I NVERL
Sbjct: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK VKRP LKKNPLKNLNAMLKLNPYAKTARRM+LLAE QRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKR +  KEDA A++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. NCBI nr
Match: gi|659083961|ref|XP_008442632.1| (PREDICTED: 60S ribosomal protein L4 [Cucumis melo])

HSP 1 Score: 735.3 bits (1897), Expect = 5.6e-209
Identity = 377/404 (93.32%), Postives = 396/404 (98.02%), Query Frame = 1 

Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV+VQ+LEGDMATD++PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR
Sbjct: 3   AAAARPLVAVQTLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           NQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLV+SDSAEG+EKTS+AIKVLKQVGAF
Sbjct: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAF 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPG++I NVERLN
Sbjct: 183 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVVKPIKK VKRP LKKNPLKNLNAMLKLNPYAKTARRM+LLAE QRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR++  KEDA A++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 KRSI-PKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]
BLAST of CSPI04G14000 vs. NCBI nr
Match: gi|951072874|ref|XP_014491920.1| (PREDICTED: 60S ribosomal protein L4 [Vigna radiata var. radiata])

HSP 1 Score: 723.4 bits (1866), Expect = 2.2e-205
Identity = 367/405 (90.62%), Postives = 389/405 (96.05%), Query Frame = 1 

Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLV+VQSLEGDMATDA+ TVP+PDVM+ASIRPDIV+FVHSNISKNSRQPYAVS+
Sbjct: 1   MAAAARPLVTVQSLEGDMATDASATVPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAI+ASA+PSLVLARGHRIETVPELPLV+SDSAEGVEKT  AIKVLKQ+GA
Sbjct: 121 VNQKRYAVVSAISASAIPSLVLARGHRIETVPELPLVISDSAEGVEKTKEAIKVLKQIGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH IRPGKGKMRNRRYISRKGPLIVYGTEGAK VKAFRN+PGVE+ANVERL
Sbjct: 181 FPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNVPGVEVANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSF+K SEKKKGY+LPRSKMVN+DLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+V R  LKKNPLKNLN MLKLNPYAKTA+RMALLAE QRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKDVTRATLKKNPLKNLNVMLKLNPYAKTAKRMALLAEAQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKR   +KE+A+ IRAAGKAWY TM+SDSDYTEF+NFSKWLGVSQ
Sbjct: 361 KKRKTVSKEEASTIRAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405

The following BLAST results are available for this feature:
BLAST of CSPI04G14000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL4_PRUAR4.8e-20088.3760S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1[more]
RL4A_ARATH4.0e-19182.9260S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1[more]
RL4B_ARATH2.6e-19082.9260S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=2 SV=2[more]
RL4A_XENLA6.8e-12261.7360S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-a PE=2 SV=2[more]
RL4B_XENLA8.9e-12261.4560S ribosomal protein L4-B OS=Xenopus laevis GN=rpl4-b PE=2 SV=2[more]
BLAST of CSPI04G14000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Q4_CUCSA3.1e-222100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292970 PE=4 SV=1[more]
A0A0A0LDW3_CUCSA4.6e-21093.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736750 PE=4 SV=1[more]
A0A0S3SSP9_PHAAN1.5e-20590.62Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G264300 PE=... [more]
A0A0B0PKI8_GOSAR2.6e-20590.8660S ribosomal L4 OS=Gossypium arboreum GN=F383_00247 PE=4 SV=1[more]
A0A0B0NP69_GOSAR2.2e-20490.8460S ribosomal L4 OS=Gossypium arboreum GN=F383_05206 PE=4 SV=1[more]
BLAST of CSPI04G14000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G09630.12.3e-19282.92 Ribosomal protein L4/L1 family[more]
AT5G02870.11.5e-19182.92 Ribosomal protein L4/L1 family[more]
BLAST of CSPI04G14000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448709|ref|XP_004142108.1|4.4e-222100.00PREDICTED: 60S ribosomal protein L4 [Cucumis sativus][more]
gi|659096785|ref|XP_008449286.1|1.9e-22099.26PREDICTED: 60S ribosomal protein L4-like [Cucumis melo][more]
gi|449440055|ref|XP_004137800.1|6.6e-21093.09PREDICTED: 60S ribosomal protein L4 [Cucumis sativus][more]
gi|659083961|ref|XP_008442632.1|5.6e-20993.32PREDICTED: 60S ribosomal protein L4 [Cucumis melo][more]
gi|951072874|ref|XP_014491920.1|2.2e-20590.62PREDICTED: 60S ribosomal protein L4 [Vigna radiata var. radiata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002136Ribosomal_L4/L1e
IPR013000Ribosomal_L4/L1e_euk/arc_CS
IPR023574Ribosomal_L4_dom_sf
IPR025755Ribos_L4_C_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005840 ribosome
cellular_component GO:0016592 mediator complex
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0001104 RNA polymerase II transcription cofactor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14000.1CSPI04G14000.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 26..266
score: 2.2
IPR013000Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved sitePROSITEPS00939RIBOSOMAL_L1Ecoord: 120..146
scor
IPR023574Ribosomal protein L4 domainGENE3DG3DSA:3.40.1370.10coord: 8..268
score: 7.5E
IPR023574Ribosomal protein L4 domainunknownSSF52166Ribosomal protein L4coord: 10..267
score: 2.88
IPR02575560S ribosomal protein L4, C-terminal domainPFAMPF14374Ribos_L4_asso_Ccoord: 280..353
score: 8.7
NoneNo IPR availableunknownCoilCoilcoord: 345..365
scor
NoneNo IPR availablePANTHERPTHR1943160S RIBOSOMAL PROTEIN L4coord: 3..405
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G14000Cla018267Watermelon (97103) v1cpiwmB345
CSPI04G14000Cla017849Watermelon (97103) v1cpiwmB292
CSPI04G14000Csa4G292970Cucumber (Chinese Long) v2cpicuB181
CSPI04G14000Csa3G736750Cucumber (Chinese Long) v2cpicuB178
CSPI04G14000MELO3C014262Melon (DHL92) v3.5.1cpimeB290
CSPI04G14000MELO3C009306Melon (DHL92) v3.5.1cpimeB288
CSPI04G14000ClCG04G008800Watermelon (Charleston Gray)cpiwcgB316
CSPI04G14000ClCG10G020630Watermelon (Charleston Gray)cpiwcgB282
CSPI04G14000Lsi01G013670Bottle gourd (USVL1VR-Ls)cpilsiB247
CSPI04G14000Lsi03G020600Bottle gourd (USVL1VR-Ls)cpilsiB276
CSPI04G14000MELO3C014262.2Melon (DHL92) v3.6.1cpimedB284
CSPI04G14000MELO3C009306.2Melon (DHL92) v3.6.1cpimedB282
CSPI04G14000CsaV3_4G024340Cucumber (Chinese Long) v3cpicucB212
CSPI04G14000CsaV3_3G035460Cucumber (Chinese Long) v3cpicucB209
CSPI04G14000Cla97C10G203840Watermelon (97103) v2cpiwmbB280
CSPI04G14000Cla97C04G075480Watermelon (97103) v2cpiwmbB307
CSPI04G14000Bhi03G001288Wax gourdcpiwgoB410
CSPI04G14000Bhi11G001818Wax gourdcpiwgoB359
CSPI04G14000Cucsa.065650Cucumber (Gy14) v1cgycpiB055
CSPI04G14000Cucsa.307240Cucumber (Gy14) v1cgycpiB460
CSPI04G14000CmaCh06G003450Cucurbita maxima (Rimu)cmacpiB852
CSPI04G14000CmaCh07G009400Cucurbita maxima (Rimu)cmacpiB876
CSPI04G14000CmoCh06G003410Cucurbita moschata (Rifu)cmocpiB834
CSPI04G14000CmoCh07G009870Cucurbita moschata (Rifu)cmocpiB856
CSPI04G14000CmoCh14G001740Cucurbita moschata (Rifu)cmocpiB254
CSPI04G14000Cp4.1LG08g11260Cucurbita pepo (Zucchini)cpecpiB873
CSPI04G14000Cp4.1LG03g02100Cucurbita pepo (Zucchini)cpecpiB621
CSPI04G14000Cp4.1LG19g04290Cucurbita pepo (Zucchini)cpecpiB497
CSPI04G14000CsGy4G013570Cucumber (Gy14) v2cgybcpiB170
CSPI04G14000CsGy3G030640Cucumber (Gy14) v2cgybcpiB124
CSPI04G14000Carg12588Silver-seed gourdcarcpiB1037
CSPI04G14000Carg25801Silver-seed gourdcarcpiB0454
CSPI04G14000Carg01014Silver-seed gourdcarcpiB0184
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI04G14000CSPI03G32870Wild cucumber (PI 183967)cpicpiB107
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G14000Cucumber (Chinese Long) v3cpicucB241
CSPI04G14000Watermelon (97103) v2cpiwmbB295
CSPI04G14000Wild cucumber (PI 183967)cpicpiB153
CSPI04G14000Wild cucumber (PI 183967)cpicpiB162
CSPI04G14000Cucurbita maxima (Rimu)cmacpiB266
CSPI04G14000Cucumber (Chinese Long) v2cpicuB191
CSPI04G14000Cucumber (Chinese Long) v2cpicuB200
CSPI04G14000Melon (DHL92) v3.5.1cpimeB264
CSPI04G14000Watermelon (Charleston Gray)cpiwcgB304
CSPI04G14000Watermelon (Charleston Gray)cpiwcgB305
CSPI04G14000Watermelon (97103) v1cpiwmB354
CSPI04G14000Watermelon (97103) v1cpiwmB355
CSPI04G14000Bottle gourd (USVL1VR-Ls)cpilsiB246
CSPI04G14000Cucumber (Gy14) v2cgybcpiB278