CSPI04G10290 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G10290
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionLipid transfer protein
LocationChr4 : 8359192 .. 8359535 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAATATCACAATTCTTTCGAAATCACCAAGAAAATGAAGAGAGTTTCGATTTCAACAAGTCTTTGCCTATCGGTGCCTGTGATGGCAATGGTGATGGTGGTGGCGCTCATCACCGGAGCTGGACTGGCAGATGCAGTGAATTGTAATCCTATGGAGATGAGACCATGTCTTCCGGCATTGGAATCGTCAGTGCCGCCAACAGCTGAATGTTGTGAGAAATTGAAGGAGCAAGAGCCATGCTTTTGTGCATACCTCAAAAGTCCTGTATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTGCTACTTCTTGTCGCGTTCCTATACCCACCTGCTAG

mRNA sequence

ATGAAGAGAGTTTCGATTTCAACAAGTCTTTGCCTATCGGTGCCTGTGATGGCAATGGTGATGGTGGTGGCGCTCATCACCGGAGCTGGACTGGCAGATGCAGTGAATTGTAATCCTATGGAGATGAGACCATGTCTTCCGGCATTGGAATCGTCAGTGCCGCCAACAGCTGAATGTTGTGAGAAATTGAAGGAGCAAGAGCCATGCTTTTGTGCATACCTCAAAAGTCCTGTATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTGCTACTTCTTGTCGCGTTCCTATACCCACCTGCTAG

Coding sequence (CDS)

ATGAAGAGAGTTTCGATTTCAACAAGTCTTTGCCTATCGGTGCCTGTGATGGCAATGGTGATGGTGGTGGCGCTCATCACCGGAGCTGGACTGGCAGATGCAGTGAATTGTAATCCTATGGAGATGAGACCATGTCTTCCGGCATTGGAATCGTCAGTGCCGCCAACAGCTGAATGTTGTGAGAAATTGAAGGAGCAAGAGCCATGCTTTTGTGCATACCTCAAAAGTCCTGTATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTGCTACTTCTTGTCGCGTTCCTATACCCACCTGCTAG
Homology
[Close]
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 

Query: 35  VNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATS 94
           V C+P+++ PCL  + S  P    CC+KL+EQ PC C YLK+P  + Y+ SPNA+K+A++
Sbjct: 1   VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 95  CRVPIPTC 103
           C VP+P C
Sbjct: 61  CGVPVPQC 68

[Close]
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-16
Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 1 

Query: 4   VSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKL 63
           +++   + +SV    +V+ + LI    +A+AV CNP E+  C+PA+     P++ CC KL
Sbjct: 1   MTMKMKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKL 60

Query: 64  KEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           K QEPC C Y+K+P  K Y+ SP AKK+ ++C V  P C
Sbjct: 61  KVQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1 

Query: 37  CNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCR 96
           C+ +++ PCL A+  + PP+A CC KLKEQ+PC C YLK P  K Y+ SP A+K A+SC 
Sbjct: 3   CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 97  VPI 100
           V +
Sbjct: 63  VAL 65

[Close]
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-12
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 12  LSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFC 71
           L+V V+A+ MV A   G       +CN  ++  C  A+     PTA CC  L+ Q+ CFC
Sbjct: 5   LAVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFC 64

Query: 72  AYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
            + K P +  Y+ SPNA+K  +SC + +PTC
Sbjct: 65  QFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTPX_ORYSJ (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.3e-12
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1 

Query: 12  LSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFC 71
           L+V V+A+ MV A   G        CN  ++  C  A+     PTA CC  L+ Q+ CFC
Sbjct: 5   LAVLVLAVAMVAACGGGVVGVAGAGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFC 64

Query: 72  AYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
            + K P +  Y+ SPNA+K  +SC + +PTC
Sbjct: 65  QFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]
BLAST of CSPI04G10290 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 4.7e-50
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MKRVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC 60
           MK+VSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC
Sbjct: 1   MKKVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC 60

Query: 61  EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC
Sbjct: 61  EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of CSPI04G10290 vs. TrEMBL
Match: A5JUZ7_SESIN (Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-21
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 

Query: 16  VMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLK 75
           V+A+V+V+A +       A  CNP+E+ PCL A+  S PP+AECC KLKEQ PCFC Y+K
Sbjct: 11  VVAIVVVLA-VAEVHETGAAPCNPVELSPCLAAISGSQPPSAECCSKLKEQVPCFCDYVK 70

Query: 76  SPVFKPYLESPNAKKIATSCRVPIPTC 103
           +PVFKPY++SPNAKK+A +C V  PTC
Sbjct: 71  NPVFKPYVDSPNAKKVAATCGVAFPTC 96

[Close]
BLAST of CSPI04G10290 vs. TrEMBL
Match: A0A0A0KW80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 8   TSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQE 67
           T LCL      +V+V   ++   L +AV+CNP E+ PC+ A+ SS  PTA CC+KL++QE
Sbjct: 7   TGLCL------LVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 66

Query: 68  PCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           PC+C YLK P +K Y ESP  + IA+ CRVPIP C
Sbjct: 67  PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95

[Close]
BLAST of CSPI04G10290 vs. TrEMBL
Match: B9H330_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 16  VMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLK 75
           ++ MV+VV L+  A ++ AV CNP ++ PCLPA+ SS PP+  CC KLKEQ+PC C YLK
Sbjct: 7   LVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCLCGYLK 66

Query: 76  SPVFKPYLESPNAKKIATSCRVPIPTC 103
            P  K ++ SP A+K+A++C VP P+C
Sbjct: 67  DPALKQFVSSPGARKVASACGVPYPSC 93

[Close]
BLAST of CSPI04G10290 vs. TrEMBL
Match: A0A0D2TTY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G057100 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.6e-20
Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 1 

Query: 1   MKRVSISTSLCLSVPVMAMVMVVALITGAG-LADAVNCNPMEMRPCLPALESSVPPTAEC 60
           MKRVS   +LC+      + + V L +G    A+AV CNP+E+ PC PAL SS PP++ C
Sbjct: 1   MKRVSF-VALCV------VALAVVLFSGESRTAEAVTCNPVELAPCSPALTSSSPPSSAC 60

Query: 61  CEKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           C KLK Q+PC C YLK+P  K Y+ SPNAKK+A++C VP P C
Sbjct: 61  CSKLKAQQPCLCGYLKNPSLKQYVNSPNAKKVASTCGVPYPKC 96

[Close]
BLAST of CSPI04G10290 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 5.9e-20
Identity = 38/89 (42.70%), Postives = 62/89 (69.66%), Query Frame = 1 

Query: 14  VPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAY 73
           V V+A+   + L+T   +A+ V C+PM++  C  A+ SS PP+  CC KL+EQ+PC C Y
Sbjct: 7   VSVLALAAAILLLT-VPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGY 66

Query: 74  LKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           +++P  + Y+ SPNA+K++ SC++P P+C
Sbjct: 67  MRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]
BLAST of CSPI04G10290 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 44/99 (44.44%), Postives = 70/99 (70.71%), Query Frame = 1 

Query: 4   VSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKL 63
           V I T++ +S+  +A V+++ L   A  A+AV C+PM++ PC  A+ SS PP+A CC KL
Sbjct: 2   VMIKTTM-VSLFALAAVLLMIL---APAAEAVTCSPMQLSPCATAITSSSPPSALCCAKL 61

Query: 64  KEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           KEQ PC C Y+++P  + ++ +PNA+K++ SC++PIP C
Sbjct: 62  KEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]
BLAST of CSPI04G10290 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.0e-16
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1 

Query: 30  GLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLKSPVFKPYLESPNAK 89
           G AD V C+ +++  C   + + VPP+ ECC KLKEQ+PCFC Y+K P +  Y+ S NAK
Sbjct: 32  GEAD-VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAK 91

Query: 90  KIATSCRVPIPTC 103
           K   +C VP PTC
Sbjct: 92  KTLATCGVPYPTC 103

[Close]
BLAST of CSPI04G10290 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 6.7e-16
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 

Query: 20  VMVVALITGAGLADAVN-CNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLKSPV 79
           ++++ ++       AV+ CNP ++ PCL  +     P+  CC K+KEQ+ C C YLK+P 
Sbjct: 15  ILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPN 74

Query: 80  FKPYLESPNAKKIATSCRVPIPTC 103
           FK +L SPNAK IAT C  P P C
Sbjct: 75  FKSFLNSPNAKIIATDCHCPYPKC 98

[Close]
BLAST of CSPI04G10290 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 3.3e-15
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 1 

Query: 14  VPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAY 73
           VPV A V     + G+G    V C+  ++  C+ A+ +  PP+ +CC KLKE E C C Y
Sbjct: 20  VPVKARV-----VKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTY 79

Query: 74  LKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           +++P++  Y+ SPNA+K   +C V  PTC
Sbjct: 80  IQNPLYSSYVTSPNARKTLAACDVAYPTC 103

[Close]
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|700198657|gb|KGN53815.1| (hypothetical protein Csa_4G141230 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 6.7e-50
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MKRVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC 60
           MK+VSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC
Sbjct: 1   MKKVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC 60

Query: 61  EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC
Sbjct: 61  EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|659086709|ref|XP_008444077.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-42
Identity = 87/102 (85.29%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   MKRVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC 60
           MK+VSIS++LCLS  +MA VMVVALITGA LADAVNCNP EMRPCLPALESSVPPTAECC
Sbjct: 1   MKKVSISSTLCLSASMMATVMVVALITGARLADAVNCNPTEMRPCLPALESSVPPTAECC 60

Query: 61  EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           EKLKEQEPCFC YLKSP+FK YLESPNAKKIA+SC +PIPTC
Sbjct: 61  EKLKEQEPCFCEYLKSPIFKRYLESPNAKKIASSCGIPIPTC 102

[Close]
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|694439405|ref|XP_009346593.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 1 

Query: 1   MKRVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECC 60
           MK  S S + CL V      MVVAL   A   +AV C+P+E+ PCL A+ S  PP+A CC
Sbjct: 1   MKLSSGSLAFCLMV-----AMVVALCDEARTVEAVTCSPLELSPCLEAIRSGAPPSATCC 60

Query: 61  EKLKEQEPCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           EKLKEQ+PCFC Y+K+PV KPY+++PNAKK+A++C VP P C
Sbjct: 61  EKLKEQQPCFCEYIKNPVLKPYIDNPNAKKVASACGVPFPQC 97

[Close]
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|747098318|ref|XP_011097163.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Sesamum indicum])

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-21
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 

Query: 16  VMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCFCAYLK 75
           V+A+V+V+A +       A  CNP+E+ PCL A+  S PP+AECC KLKEQ PCFC Y+K
Sbjct: 11  VVAIVVVLA-VAEVHETGAAPCNPVELSPCLAAISGSQPPSAECCSKLKEQVPCFCDYVK 70

Query: 76  SPVFKPYLESPNAKKIATSCRVPIPTC 103
           +PVFKPY++SPNAKK+A +C V  PTC
Sbjct: 71  NPVFKPYVDSPNAKKVAATCGVAFPTC 96

[Close]
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|659086707|ref|XP_008444076.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20
Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 12  LSVPVMAMVMVVAL-ITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPCF 71
           L  P + +++VVA+ +TG  L +A +CNP E+ PC+ A+ SS  PTA CC+KL++QEPC+
Sbjct: 3   LQGPGLCLLVVVAIFLTGVRLGEAASCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCY 62

Query: 72  CAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 103
           C YLK P +K Y ESP  + IA+ CRVPIP C
Sbjct: 63  CGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 94

The following BLAST results are available for this feature:
BLAST of CSPI04G10290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP2_PRUAR3.4e-1748.53Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP_VIGUN1.3e-1640.40Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_APIGA1.6e-1450.79Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
NLTPX_ORYSI2.5e-1238.46Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=... [more]
NLTPX_ORYSJ3.3e-1238.46Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 P... [more]
BLAST of CSPI04G10290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW09_CUCSA4.7e-5099.02Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1[more]
A5JUZ7_SESIN3.5e-2157.47Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1[more]
A0A0A0KW80_CUCSA1.7e-2050.53Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1[more]
B9H330_POPTR1.7e-2051.72Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1[more]
A0A0D2TTY3_GOSRA6.6e-2051.46Uncharacterized protein OS=Gossypium raimondii GN=B456_008G057100 PE=4 SV=1[more]
BLAST of CSPI04G10290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48750.15.9e-2042.70 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G18280.11.3e-1944.44 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38170.11.0e-1649.32 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73780.16.7e-1642.86 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38160.13.3e-1539.33 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of CSPI04G10290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198657|gb|KGN53815.1|6.7e-5099.02hypothetical protein Csa_4G141230 [Cucumis sativus][more]
gi|659086709|ref|XP_008444077.1|6.7e-4285.29PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|694439405|ref|XP_009346593.1|1.1e-2354.90PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri][more]
gi|747098318|ref|XP_011097163.1|5.0e-2157.47PREDICTED: non-specific lipid-transfer protein 2-like [Sesamum indicum][more]
gi|659086707|ref|XP_008444076.1|1.5e-2052.17PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G10290.1CSPI04G10290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 17..100
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 37..102
score: 5.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 36..102
score: 3.4
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 36..102
score: 4.3
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 1..102
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G10290Cla97C07G143390Watermelon (97103) v2cpiwmbB337
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G10290Melon (DHL92) v3.6.1cpimedB304
CSPI04G10290Cucumber (Gy14) v2cgybcpiB168
CSPI04G10290Cucumber (Chinese Long) v3cpicucB213
CSPI04G10290Wax gourdcpiwgoB375
CSPI04G10290Cucurbita maxima (Rimu)cmacpiB265
CSPI04G10290Cucurbita moschata (Rifu)cmocpiB252
CSPI04G10290Cucumber (Chinese Long) v2cpicuB182
CSPI04G10290Melon (DHL92) v3.5.1cpimeB313
CSPI04G10290Melon (DHL92) v3.5.1cpimeB332
CSPI04G10290Watermelon (Charleston Gray)cpiwcgB347
CSPI04G10290Watermelon (97103) v1cpiwmB312
CSPI04G10290Cucurbita pepo (Zucchini)cpecpiB619