CSPI04G10280 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G10280
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionLipid transfer protein
LocationChr4 : 8350428 .. 8350712 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTCAAGGTACAGGCCTTTGCCTTCTTGTGGTGGCGGCGATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG

mRNA sequence

ATGAAAGTTCAAGGTACAGGCCTTTGCCTTCTTGTGGTGGCGGCGATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG

Coding sequence (CDS)

ATGAAAGTTCAAGGTACAGGCCTTTGCCTTCTTGTGGTGGCGGCGATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG
Homology
[Close]
BLAST of CSPI04G10280 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSSVR-LGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 60
          MK++ + +C +VV A+FL  V  + EAV+CNPTELS CV AIT  + P++ CC KL+ QE
Sbjct: 5  MKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQE 64

Query: 61 PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          PC C Y+K+P  K Y  SP  + + S C V  P C
Sbjct: 65 PCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]
BLAST of CSPI04G10280 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1 

Query: 27 VSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKDPKYKAYAESPRVRAIASQ 86
          V+C+P +LSPC+  I S       CCQKLR+Q PC CGYLK+P  + Y  SP  R +AS 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 87 CRVPIPKC 95
          C VP+P+C
Sbjct: 61 CGVPVPQC 68

[Close]
BLAST of CSPI04G10280 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-15
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 28 SCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKDPKYKAYAESPRVRAIASQC 87
          +C+  +LSPC++AIT +T P+AACC KL++Q+PC CGYLKDP  K Y  SP  R  AS C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 88 RVPIPKC 95
           V + KC
Sbjct: 62 GVAL-KC 67

[Close]
BLAST of CSPI04G10280 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-12
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 1 

Query: 1   MKVQGTGLCLLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 60
           M+ +     ++V+     +    G   +C P +L+ C SAI   T P+  CC  LR Q+ 
Sbjct: 9   MRKEAAVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQG 68

Query: 61  CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
           C C Y+KDP Y  Y  SP  R   + C +P+P C
Sbjct: 69  CLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]
BLAST of CSPI04G10280 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 3.9e-12
Identity = 35/91 (38.46%), Postives = 48/91 (52.75%), Query Frame = 1 

Query: 8  LCLLVVAAIFLSSVRLG----EAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYC 67
          L +LV+A   +++   G       SCN  +L+ C  AI     PTAACC  LR Q+ C+C
Sbjct: 5  LAVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFC 64

Query: 68 GYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
           + KDP+Y  Y  SP  R   S C + +P C
Sbjct: 65 QFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]
BLAST of CSPI04G10280 vs. TrEMBL
Match: A0A0A0KW80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-45
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 60
          MKVQGTGLCLLVV AIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP
Sbjct: 2  MKVQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 61

Query: 61 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC
Sbjct: 62 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95

[Close]
BLAST of CSPI04G10280 vs. TrEMBL
Match: M5WX74_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013890mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.4e-21
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSS-VRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 60
          +   G  LC++V+ A+ LS   R+ EAV+C+P +LSPC+  I S + P+  CCQKLR+Q 
Sbjct: 4  LSYSGVALCVVVMVAVMLSEEARMAEAVTCSPVQLSPCLGPINSGSPPSTTCCQKLREQR 63

Query: 61 PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          PC CGYLK+P  + Y  SP  R +AS C VP+P+C
Sbjct: 64 PCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC 98

[Close]
BLAST of CSPI04G10280 vs. TrEMBL
Match: S4TID2_GOSHI (Lipid transfer protein OS=Gossypium hirsutum GN=LTP9 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-20
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 1 

Query: 2  KVQGTGLCLLVVAAIFLSSV-RLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 61
          +V    LC++ ++ +  S   R+ EAV+CNPTELSPC+SA TSS+ P+AACC KL+ Q+P
Sbjct: 3  RVSFVALCVVALSVVLFSGESRMAEAVTCNPTELSPCLSAFTSSSPPSAACCSKLKAQKP 62

Query: 62 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          C CGY+K+P  K Y  SP  + +AS C V  PKC
Sbjct: 63 CLCGYIKNPSLKQYVNSPNAKNVASTCGVTYPKC 96

[Close]
BLAST of CSPI04G10280 vs. TrEMBL
Match: A0A068U2N8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040234001 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-20
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 1  MKVQGTGLC-LLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 60
          MK+    LC +L++ A+ +  V +  AV+C+PTELSPCV AI S+  P+ ACC KLR+Q 
Sbjct: 1  MKLSQMRLCSVLLLVAVIVGEVEVSRAVTCSPTELSPCVGAIISNQPPSPACCSKLREQR 60

Query: 61 PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          PC CGYL+DP  + Y  SP  R +AS C VP P+C
Sbjct: 61 PCLCGYLRDPNLRQYVNSPNARRVASSCGVPTPRC 95

[Close]
BLAST of CSPI04G10280 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.6e-20
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1 

Query: 6   TGLCL------LVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 65
           T LCL      +V+    ++   L +AV+CNP E+ PC+ A+ SS  PTA CC+KL++QE
Sbjct: 8   TSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQE 67

Query: 66  PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
           PC+C YLK P +K Y ESP  + IA+ CRVPIP C
Sbjct: 68  PCFCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of CSPI04G10280 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 4.2e-20
Identity = 38/85 (44.71%), Postives = 60/85 (70.59%), Query Frame = 1 

Query: 10 LLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKDP 69
          L + AAI L +V + E V+C+P +L+ C +A+TSS+ P+ ACC KLR+Q+PC CGY+++P
Sbjct: 10 LALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGYMRNP 69

Query: 70 KYKAYAESPRVRAIASQCRVPIPKC 95
            + Y  SP  R +++ C++P P C
Sbjct: 70 TLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]
BLAST of CSPI04G10280 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 9.2e-20
Identity = 39/93 (41.94%), Postives = 64/93 (68.82%), Query Frame = 1 

Query: 3  VQGTGLCLLVVAAIFLSSVR-LGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPC 62
          ++ T + L  +AA+ L  +    EAV+C+P +LSPC +AITSS+ P+A CC KL++Q PC
Sbjct: 4  IKTTMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPC 63

Query: 63 YCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
           CGY+++P  + +  +P  R ++  C++PIP+C
Sbjct: 64 LCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]
BLAST of CSPI04G10280 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-15
Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 9  CLLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKD 68
          C +++  I     R+     CNP +LSPC+  I   + P+  CC K+++Q+ C C YLK+
Sbjct: 13 CTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKN 72

Query: 69 PKYKAYAESPRVRAIASQCRVPIPKC 95
          P +K++  SP  + IA+ C  P PKC
Sbjct: 73 PNFKSFLNSPNAKIIATDCHCPYPKC 98

[Close]
BLAST of CSPI04G10280 vs. TAIR10
Match: AT5G38195.1 (AT5G38195.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 4.4e-14
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 1 

Query: 8  LCLLVVAAIFLSS---VRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCG 67
          L ++ V  + +SS   ++   + SC PTEL PC+ A+T+   PT  CC KL +Q+ C CG
Sbjct: 6  LMVITVVIVVMSSPILIKSEVSSSCIPTELMPCLPAMTTGGQPTKDCCDKLIEQKECLCG 65

Query: 68 YLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          Y+ +P Y  +  SP  R +   C +P P C
Sbjct: 66 YINNPLYSTFVSSPVARKVLEVCNIPYPSC 95

[Close]
BLAST of CSPI04G10280 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-13
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 24  GEA-VSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKDPKYKAYAESPRVRA 83
           GEA V+C+  +LS C + + +   P+  CC KL++Q+PC+C Y+KDP+Y  Y  S   + 
Sbjct: 32  GEADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKK 91

Query: 84  IASQCRVPIPKC 95
             + C VP P C
Sbjct: 92  TLATCGVPYPTC 103

[Close]
BLAST of CSPI04G10280 vs. NCBI nr
Match: gi|700198655|gb|KGN53813.1| (hypothetical protein Csa_4G141210 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-45
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 60
          MKVQGTGLCLLVV AIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP
Sbjct: 2  MKVQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 61

Query: 61 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC
Sbjct: 62 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95

[Close]
BLAST of CSPI04G10280 vs. NCBI nr
Match: gi|659086707|ref|XP_008444076.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 3.3e-43
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 60
          MK+QG GLCLLVV AIFL+ VRLGEA SCNPTELSPCVSAITSSTAPTAACCQKLRQQEP
Sbjct: 1  MKLQGPGLCLLVVVAIFLTGVRLGEAASCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 60

Query: 61 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC
Sbjct: 61 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 94

[Close]
BLAST of CSPI04G10280 vs. NCBI nr
Match: gi|595966620|ref|XP_007217198.1| (hypothetical protein PRUPE_ppa013890mg [Prunus persica])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-20
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSS-VRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 60
          +   G  LC++V+ A+ LS   R+ EAV+C+P +LSPC+  I S + P+  CCQKLR+Q 
Sbjct: 4  LSYSGVALCVVVMVAVMLSEEARMAEAVTCSPVQLSPCLGPINSGSPPSTTCCQKLREQR 63

Query: 61 PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          PC CGYLK+P  + Y  SP  R +AS C VP+P+C
Sbjct: 64 PCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC 98

[Close]
BLAST of CSPI04G10280 vs. NCBI nr
Match: gi|645246251|ref|XP_008229267.1| (PREDICTED: non-specific lipid-transfer protein 2 [Prunus mume])

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-20
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1 

Query: 1  MKVQGTGLCLLVVAAIFLSS-VRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQE 60
          +   G  LC++V+ A+ LS   R+ EAV+C+P +LSPC+  I S   P+  CCQKLR+Q 
Sbjct: 4  LSYSGVALCVVVMVAVMLSEEARMAEAVTCSPVQLSPCLGPINSGARPSTTCCQKLREQR 63

Query: 61 PCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          PC CGYLK+P  + Y  SP  R +AS C VP+P+C
Sbjct: 64 PCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC 98

[Close]
BLAST of CSPI04G10280 vs. NCBI nr
Match: gi|440494829|gb|AGC08429.1| (lipid transfer protein [Gossypium hirsutum])

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-20
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 1 

Query: 2  KVQGTGLCLLVVAAIFLSSV-RLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 61
          +V    LC++ ++ +  S   R+ EAV+CNPTELSPC+SA TSS+ P+AACC KL+ Q+P
Sbjct: 3  RVSFVALCVVALSVVLFSGESRMAEAVTCNPTELSPCLSAFTSSSPPSAACCSKLKAQKP 62

Query: 62 CYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC 95
          C CGY+K+P  K Y  SP  + +AS C V  PKC
Sbjct: 63 CLCGYIKNPSLKQYVNSPNAKNVASTCGVTYPKC 96

The following BLAST results are available for this feature:
BLAST of CSPI04G10280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP_VIGUN1.1e-1948.42Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_PRUAR1.2e-1651.47Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP2_APIGA1.3e-1555.22Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
NLTP2_HORVU1.0e-1234.04Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=... [more]
NLTPX_ORYSI3.9e-1238.46Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=... [more]
BLAST of CSPI04G10280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW80_CUCSA1.1e-4598.94Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1[more]
M5WX74_PRUPE9.4e-2148.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013890mg PE=4 SV=1[more]
S4TID2_GOSHI1.6e-2051.06Lipid transfer protein OS=Gossypium hirsutum GN=LTP9 PE=4 SV=1[more]
A0A068U2N8_COFCA2.1e-2050.53Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040234001 PE=4 SV=1[more]
A0A0A0KW09_CUCSA4.6e-2049.47Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1[more]
BLAST of CSPI04G10280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48750.14.2e-2044.71 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G18280.19.2e-2041.94 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73780.11.1e-1537.21 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38195.14.4e-1437.78 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38170.14.9e-1340.28 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of CSPI04G10280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198655|gb|KGN53813.1|1.6e-4598.94hypothetical protein Csa_4G141210 [Cucumis sativus][more]
gi|659086707|ref|XP_008444076.1|3.3e-4393.62PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|595966620|ref|XP_007217198.1|1.3e-2048.42hypothetical protein PRUPE_ppa013890mg [Prunus persica][more]
gi|645246251|ref|XP_008229267.1|1.8e-2048.42PREDICTED: non-specific lipid-transfer protein 2 [Prunus mume][more]
gi|440494829|gb|AGC08429.1|2.3e-2051.06lipid transfer protein [Gossypium hirsutum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G10280.1CSPI04G10280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 20..92
score: 5.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 29..94
score: 5.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 28..94
score: 7.75
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 28..94
score: 1.5
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 1..94
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G10280Csa4G141210Cucumber (Chinese Long) v2cpicuB182
CSPI04G10280Bhi01G001684Wax gourdcpiwgoB375
CSPI04G10280CmaCh01G004080Cucurbita maxima (Rimu)cmacpiB479
CSPI04G10280Cp4.1LG02g13790Cucurbita pepo (Zucchini)cpecpiB569
CSPI04G10280CsGy4G009890Cucumber (Gy14) v2cgybcpiB168
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G10280Cucumber (Chinese Long) v3cpicucB213
CSPI04G10280Watermelon (97103) v2cpiwmbB337
CSPI04G10280Cucurbita maxima (Rimu)cmacpiB265
CSPI04G10280Cucurbita moschata (Rifu)cmocpiB252
CSPI04G10280Melon (DHL92) v3.5.1cpimeB313
CSPI04G10280Melon (DHL92) v3.5.1cpimeB332
CSPI04G10280Watermelon (Charleston Gray)cpiwcgB347
CSPI04G10280Watermelon (97103) v1cpiwmB312
CSPI04G10280Cucurbita pepo (Zucchini)cpecpiB619
CSPI04G10280Melon (DHL92) v3.6.1cpimedB304