CSPI04G08370 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G08370
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 6135702 .. 6135866 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATCCAAACAATAATCCTACCAACCAACAACAGGACCCAGATCAGAACCCTGCTTACCTTACCCATGATTTAGACCATCCCATCGGGTCATATGCATCACCAAGCTTGTACGATTTCAACCCAGGCATAACATCTCCTGTGTTTAGGAAAGATTCATGA

mRNA sequence

ATGAAGAATCCAAACAATAATCCTACCAACCAACAACAGGACCCAGATCAGAACCCTGCTTACCTTACCCATGATTTAGACCATCCCATCGGGTCATATGCATCACCAAGCTTGTACGATTTCAACCCAGGCATAACATCTCCTGTGTTTAGGAAAGATTCATGA

Coding sequence (CDS)

ATGAAGAATCCAAACAATAATCCTACCAACCAACAACAGGACCCAGATCAGAACCCTGCTTACCTTACCCATGATTTAGACCATCCCATCGGGTCATATGCATCACCAAGCTTGTACGATTTCAACCCAGGCATAACATCTCCTGTGTTTAGGAAAGATTCATGA
Homology
[Close]
BLAST of CSPI04G08370 vs. TrEMBL
Match: A0A0A0KVN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091895 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.8e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MKNPNNNPTNQQQDPDQNPAYLTHDLDHPIGSYASPSLYDFNPGITSPVFRKDS 55
          MKNPNNNPTNQQQDPDQNPAYLTHDLDHPIGSYASPSLYDFNPGITSPVFRKDS
Sbjct: 1  MKNPNNNPTNQQQDPDQNPAYLTHDLDHPIGSYASPSLYDFNPGITSPVFRKDS 54

[Close]
BLAST of CSPI04G08370 vs. NCBI nr
Match: gi|700198465|gb|KGN53623.1| (hypothetical protein Csa_4G091895 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 9.8e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MKNPNNNPTNQQQDPDQNPAYLTHDLDHPIGSYASPSLYDFNPGITSPVFRKDS 55
          MKNPNNNPTNQQQDPDQNPAYLTHDLDHPIGSYASPSLYDFNPGITSPVFRKDS
Sbjct: 1  MKNPNNNPTNQQQDPDQNPAYLTHDLDHPIGSYASPSLYDFNPGITSPVFRKDS 54

The following BLAST results are available for this feature:
BLAST of CSPI04G08370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G08370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVN8_CUCSA6.8e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091895 PE=4 SV=1[more]
BLAST of CSPI04G08370 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G08370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198465|gb|KGN53623.1|9.8e-24100.00hypothetical protein Csa_4G091895 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G08370.1CSPI04G08370.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G08370CsaV3_4G008620Cucumber (Chinese Long) v3cpicucB213
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G08370Watermelon (97103) v2cpiwmbB331
CSPI04G08370Wax gourdcpiwgoB382
CSPI04G08370Cucumber (Gy14) v1cgycpiB411
CSPI04G08370Cucurbita maxima (Rimu)cmacpiB344
CSPI04G08370Cucurbita maxima (Rimu)cmacpiB418
CSPI04G08370Cucurbita moschata (Rifu)cmocpiB335
CSPI04G08370Cucurbita moschata (Rifu)cmocpiB406
CSPI04G08370Cucumber (Chinese Long) v2cpicuB182
CSPI04G08370Melon (DHL92) v3.5.1cpimeB312
CSPI04G08370Melon (DHL92) v3.5.1cpimeB318
CSPI04G08370Watermelon (Charleston Gray)cpiwcgB341
CSPI04G08370Watermelon (97103) v1cpiwmB317
CSPI04G08370Cucurbita pepo (Zucchini)cpecpiB226
CSPI04G08370Bottle gourd (USVL1VR-Ls)cpilsiB305
CSPI04G08370Melon (DHL92) v3.6.1cpimedB303
CSPI04G08370Melon (DHL92) v3.6.1cpimedB310
CSPI04G08370Cucumber (Gy14) v2cgybcpiB168
CSPI04G08370Silver-seed gourdcarcpiB1028