CSPI04G06300 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCGAAATTTTCTCTCCGTCAAACCCTATAAATCTCCATTTCTCATCTTCCCCTGTTCCTTGCGATTGCAGCCATAACCATGGCCAAACTCACCCTAACCTTCCTTCTCTTCTTCGTCCTTGTCACTTCCTCATGCGCTCGAGATCTCATAAATTTACCGGACACATCAGAGTCCCTCACCTTTTCCGTCTCTGCACCCGCCCAGGATTCCGATTTCAAGTCCTCGATCCTCCTCCCGACCCAGAAATTGTCCGATGACGAATCTCCAAGATCCATACCAGACACCGATCAGGTACGCACCGAACCCAATCCTACTGAAATTACTGCTCTTGATACCATAGACACCGTTTCAGATCCGGTAGTTATGATCACTTTCCGTCCAATCAACCGTCAATTCGGTCGACCATCGGTGCCGCTGATGTTCCGGAGAGGCCGCCGCGGCTGTCACCACCTCCGCAGCGTGAAGCCGTGGAGATCAATCGATCGGCTAAATGAAATCTCATACGGAAACGACATGATCGTACCTGAGGAGCGATCGAACCCTAATTCTGGGTCGAACCGCGAAATTGCAATTCCGTCGAAATGGAGTGAGTTCCGACATGTCAGACCGTGGGAGGATTCGTACAGTAGCGATTGGAAGGAAGATAAGAAGCATCTCCATCATCATTATTTCCATCACCAACACCATGAAGAAGAAGAGCATGAACACAAAGAAAAGAGCAGTTTATTGAGGAAATTCCGTAAGTTTTTGAAGCATTTGGAGTTCTGAAGATACAAAATTAAACTACAAATGATACGATTATCTGTTCTTCAGGTTTATGTTTTTTCTTTTGCTTTTTCTTGAATTGCAATAAGGTAATTAGCGTTTTACATAGTTGTGTATAGGATTTTGAATCCTTAATTATGTGTAATATAATAGCGTTGCTTATGATATGAATGGGGAGTGTGTAACTTCACTTAATTAATTACAATAATTATGCATAATGTATCTATTTGCCTGTTCATGTTATATGAATTATGTTTTTGAATGCTTTGATGGA ATGGCCAAACTCACCCTAACCTTCCTTCTCTTCTTCGTCCTTGTCACTTCCTCATGCGCTCGAGATCTCATAAATTTACCGGACACATCAGAGTCCCTCACCTTTTCCGTCTCTGCACCCGCCCAGGATTCCGATTTCAAGTCCTCGATCCTCCTCCCGACCCAGAAATTGTCCGATGACGAATCTCCAAGATCCATACCAGACACCGATCAGGTACGCACCGAACCCAATCCTACTGAAATTACTGCTCTTGATACCATAGACACCGTTTCAGATCCGGTAGTTATGATCACTTTCCGTCCAATCAACCGTCAATTCGGTCGACCATCGGTGCCGCTGATGTTCCGGAGAGGCCGCCGCGGCTGTCACCACCTCCGCAGCGTGAAGCCGTGGAGATCAATCGATCGGCTAAATGAAATCTCATACGGAAACGACATGATCGTACCTGAGGAGCGATCGAACCCTAATTCTGGGTCGAACCGCGAAATTGCAATTCCGTCGAAATGGAGTGAGTTCCGACATGTCAGACCGTGGGAGGATTCGTACAGTAGCGATTGGAAGGAAGATAAGAAGCATCTCCATCATCATTATTTCCATCACCAACACCATGAAGAAGAAGAGCATGAACACAAAGAAAAGAGCAGTTTATTGAGGAAATTCCGTAAGTTTTTGAAGCATTTGGAGTTCTGA ATGGCCAAACTCACCCTAACCTTCCTTCTCTTCTTCGTCCTTGTCACTTCCTCATGCGCTCGAGATCTCATAAATTTACCGGACACATCAGAGTCCCTCACCTTTTCCGTCTCTGCACCCGCCCAGGATTCCGATTTCAAGTCCTCGATCCTCCTCCCGACCCAGAAATTGTCCGATGACGAATCTCCAAGATCCATACCAGACACCGATCAGGTACGCACCGAACCCAATCCTACTGAAATTACTGCTCTTGATACCATAGACACCGTTTCAGATCCGGTAGTTATGATCACTTTCCGTCCAATCAACCGTCAATTCGGTCGACCATCGGTGCCGCTGATGTTCCGGAGAGGCCGCCGCGGCTGTCACCACCTCCGCAGCGTGAAGCCGTGGAGATCAATCGATCGGCTAAATGAAATCTCATACGGAAACGACATGATCGTACCTGAGGAGCGATCGAACCCTAATTCTGGGTCGAACCGCGAAATTGCAATTCCGTCGAAATGGAGTGAGTTCCGACATGTCAGACCGTGGGAGGATTCGTACAGTAGCGATTGGAAGGAAGATAAGAAGCATCTCCATCATCATTATTTCCATCACCAACACCATGAAGAAGAAGAGCATGAACACAAAGAAAAGAGCAGTTTATTGAGGAAATTCCGTAAGTTTTTGAAGCATTTGGAGTTCTGA
BLAST of CSPI04G06300 vs. TrEMBL
Match: A0A0A0KYD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051490 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-120 Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 1
BLAST of CSPI04G06300 vs. TrEMBL
Match: W9SFL4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000045 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.5e-11 Identity = 77/237 (32.49%), Postives = 114/237 (48.10%), Query Frame = 1
BLAST of CSPI04G06300 vs. TrEMBL
Match: B9RCR4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1691800 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.7e-10 Identity = 85/253 (33.60%), Postives = 124/253 (49.01%), Query Frame = 1
BLAST of CSPI04G06300 vs. TrEMBL
Match: A0A061G5Z5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016448 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.4e-07 Identity = 71/254 (27.95%), Postives = 116/254 (45.67%), Query Frame = 1
BLAST of CSPI04G06300 vs. NCBI nr
Match: gi|700198239|gb|KGN53397.1| (hypothetical protein Csa_4G051490 [Cucumis sativus]) HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120 Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 1
BLAST of CSPI04G06300 vs. NCBI nr
Match: gi|703162576|ref|XP_010113087.1| (hypothetical protein L484_000045 [Morus notabilis]) HSP 1 Score: 77.4 bits (189), Expect = 3.6e-11 Identity = 77/237 (32.49%), Postives = 114/237 (48.10%), Query Frame = 1
BLAST of CSPI04G06300 vs. NCBI nr
Match: gi|657949137|ref|XP_008341481.1| (PREDICTED: uncharacterized protein LOC103404356 [Malus domestica]) HSP 1 Score: 75.1 bits (183), Expect = 1.8e-10 Identity = 81/258 (31.40%), Postives = 114/258 (44.19%), Query Frame = 1
BLAST of CSPI04G06300 vs. NCBI nr
Match: gi|255537763|ref|XP_002509948.1| (PREDICTED: uncharacterized protein LOC8287759 [Ricinus communis]) HSP 1 Score: 73.2 bits (178), Expect = 6.8e-10 Identity = 85/253 (33.60%), Postives = 124/253 (49.01%), Query Frame = 1
BLAST of CSPI04G06300 vs. NCBI nr
Match: gi|764581292|ref|XP_011463977.1| (PREDICTED: uncharacterized protein LOC105351444 [Fragaria vesca subsp. vesca]) HSP 1 Score: 66.2 bits (160), Expect = 8.3e-08 Identity = 74/271 (27.31%), Postives = 116/271 (42.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |