CSPI04G04270 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G04270
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Glycine-rich family protein
Location	Chr4 : 2785093 .. 2785958 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCCCCCCACTATAAAAGCCACTTTAATGATCACTACACAACACAACTTCTATCCTTCAACCAATTAATAATAATTTCAAATCTCTCTCTTTCTCTCTTAGAATAAAAGAAAACTCACTAAAAATATGAAAGAACCATCTAAATTCCATCTCTCATCTCTCTTCTTTCTTCTCTTTGTACTCACATCTTCCTCCACCGTCAGCTGCGGCGCTACTCCCCGGAAACTTCTCAATTTCCCTGACATGTCTTGGGGTTCACCCAGTGGAGGAGGTGGTGGTGGGAATGGGAACCCCACTGGGGCCTATGGCTCCGGCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCAAGCCCTGGGAGCGGTTGGGGTTTCGGTTCCGGTTCGGGCCGCTCTCCAACCGGGTTTGGAAAAGGTTATGGATATGGATTTGGGTCGGGATCTGGGTCCGGGTCGGGATATGGGTATGGAAGTGGGAGTGGTGGTGCTCATGGTGGTGGATATGGGTCTGGAAGTGGCTACGGTAACTCCGGCGGTGGCGGTAGTGGTGGCGGATACGGCGGTCCGAGTGGTGATGAGTATCGATCGCCAATGACTACAAGGGACAAGAACAGGCAAGGGTAGAAAAAATGTATGTGAATGAATATATGTTATAAAGTGTAGTGATATATGGTGATAAAAAGGTGAGAATATATATGGTTAGCCCTAGCAAGCTAGCTCGCTTTTAATTATAATATATATGGTTTGTAAGCTTTGTTTAAAGTTTTCCCATATATATGAGACTCAGCCTTATAATCATATATTATAGTGTGTAGTATTATATAACTTTATAATGAGACTAAAATATATTTTCCAATTTTCC

mRNA sequence

ATGAAAGAACCATCTAAATTCCATCTCTCATCTCTCTTCTTTCTTCTCTTTGTACTCACATCTTCCTCCACCGTCAGCTGCGGCGCTACTCCCCGGAAACTTCTCAATTTCCCTGACATGTCTTGGGGTTCACCCAGTGGAGGAGGTGGTGGTGGGAATGGGAACCCCACTGGGGCCTATGGCTCCGGCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCAAGCCCTGGGAGCGGTTGGGGTTTCGGTTCCGGTTCGGGCCGCTCTCCAACCGGGTTTGGAAAAGGTTATGGATATGGATTTGGGTCGGGATCTGGGTCCGGGTCGGGATATGGGTATGGAAGTGGGAGTGGTGGTGCTCATGGTGGTGGATATGGGTCTGGAAGTGGCTACGGTAACTCCGGCGGTGGCGGTAGTGGTGGCGGATACGGCGGTCCGAGTGGTGATGAGTATCGATCGCCAATGACTACAAGGGACAAGAACAGGCAAGGGTAG

Coding sequence (CDS)

ATGAAAGAACCATCTAAATTCCATCTCTCATCTCTCTTCTTTCTTCTCTTTGTACTCACATCTTCCTCCACCGTCAGCTGCGGCGCTACTCCCCGGAAACTTCTCAATTTCCCTGACATGTCTTGGGGTTCACCCAGTGGAGGAGGTGGTGGTGGGAATGGGAACCCCACTGGGGCCTATGGCTCCGGCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCAAGCCCTGGGAGCGGTTGGGGTTTCGGTTCCGGTTCGGGCCGCTCTCCAACCGGGTTTGGAAAAGGTTATGGATATGGATTTGGGTCGGGATCTGGGTCCGGGTCGGGATATGGGTATGGAAGTGGGAGTGGTGGTGCTCATGGTGGTGGATATGGGTCTGGAAGTGGCTACGGTAACTCCGGCGGTGGCGGTAGTGGTGGCGGATACGGCGGTCCGAGTGGTGATGAGTATCGATCGCCAATGACTACAAGGGACAAGAACAGGCAAGGGTAG

Homology

[Close]

BLAST of CSPI04G04270 vs. TrEMBL
Match: A0A0A0KXP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025120 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-78
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60
           MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY
Sbjct: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60

Query: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
           GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG
Sbjct: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120

Query: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
Sbjct: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 166

[Close]

BLAST of CSPI04G04270 vs. TrEMBL
Match: V7BCU6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G091400g PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.1e-32
Identity = 104/155 (67.10%), Postives = 116/155 (74.84%), Query Frame = 1


Query: 12  LFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYN 71
           L FL F +TS++T + G   RKLL F   S G+PS      +G PTGA GSGHG NWDY+
Sbjct: 12  LLFLFFFITSTATAT-GPAGRKLL-FDMPSGGAPS------SGTPTGATGSGHGANWDYS 71

Query: 72  WGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGS 131
           WGWGS P +G+GFGSGSGRSPTGF +G GYG+GSGSGSGSGYGYGSGSGGA GGGYGSGS
Sbjct: 72  WGWGSGPATGYGFGSGSGRSPTGFARGSGYGYGSGSGSGSGYGYGSGSGGARGGGYGSGS 131

Query: 132 GYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           G GNSGGGG GGG GG  GD  R P T+R KN  G
Sbjct: 132 GSGNSGGGGYGGGNGG--GDNNRMPSTSRSKNNHG 156

[Close]

BLAST of CSPI04G04270 vs. TrEMBL
Match: A0A058ZYU9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00118 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-29
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 14  FLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWG 73
           FL+F + ++   S   +  + L+ P+MS G       GG G+P GA GSGHGPNWDY+WG
Sbjct: 11  FLIFAVFAAIAFSSPVSSARTLDLPEMSTGPT-----GGTGSPDGASGSGHGPNWDYSWG 70

Query: 74  WGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGY 133
           WGSSPGSGWG+GSGSG SPTGFGKG+GYGFGSG+GSGSG+GYGSG GGAHGGG G  SG 
Sbjct: 71  WGSSPGSGWGYGSGSGHSPTGFGKGFGYGFGSGTGSGSGFGYGSGGGGAHGGGSGYESGS 130

Query: 134 GNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQ 166
           G SGG G+GGG G   G   +SP   RD++ +
Sbjct: 131 GRSGGAGAGGGSGNSGGSGGKSPSYPRDRDHR 157

[Close]

BLAST of CSPI04G04270 vs. TrEMBL
Match: A9PEI8_POPTR (Glycine-rich family protein OS=Populus trichocarpa GN=POPTR_0012s11590g PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 96/158 (60.76%), Postives = 111/158 (70.25%), Query Frame = 1


Query: 11  SLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSP--SGGGGGGNGNPTGAYGSGHGPNW 70
           +LF L  +   S   + G T  +++   DM + SP  S    G  G P+GA GSGHGPNW
Sbjct: 9   TLFLLFLIAGGSFARNIGGTSNRVV-VGDMKFASPEMSTVPVGQTGPPSGASGSGHGPNW 68

Query: 71  DYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYG 130
           DYNWGWGS+P  GWG+GSGSGRSPTGFGKG+GYG GSGSGSGSGYGYG+GSGGA GGGYG
Sbjct: 69  DYNWGWGSTPNGGWGYGSGSGRSPTGFGKGFGYGSGSGSGSGSGYGYGTGSGGAQGGGYG 128

Query: 131 SGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           +GSG GNS GGGSG G GGPS    +SP   R +   G
Sbjct: 129 AGSGSGNSAGGGSGEGSGGPSNYGTQSPSDPRQRTNHG 165

[Close]

BLAST of CSPI04G04270 vs. TrEMBL
Match: A0A0S3SNR5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G103900 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-28
Identity = 98/155 (63.23%), Postives = 114/155 (73.55%), Query Frame = 1


Query: 12  LFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYN 71
           L FL F +TS++  + G   RKLL   DMS      GG   +GNPTG  GSG G NW+Y+
Sbjct: 12  LLFLFFFVTSTTAATGG---RKLLF--DMS-----SGGAPSSGNPTGGTGSGRGANWEYS 71

Query: 72  WGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGS 131
           WGWGS+PG+G+GFGSGSGRSPTGF +GYGYG+GSGSGSGSGYGYG GSGGA GGGYGSG+
Sbjct: 72  WGWGSAPGTGYGFGSGSGRSPTGFARGYGYGYGSGSGSGSGYGYGWGSGGARGGGYGSGN 131

Query: 132 GYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           G GNSGGGG GGG GG  GD  R P  ++ K+  G
Sbjct: 132 GSGNSGGGGYGGGNGG--GDNNRIPSASKSKSNHG 154

[Close]

BLAST of CSPI04G04270 vs. TAIR10
Match: AT5G61660.1 (AT5G61660.1 glycine-rich protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-25
Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = 1


Query: 54  GNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGY 113
           GN  G  GSG GPNW+YNWGWGS+PGSGWG+G+GSGRSPTG+G+G GYG+GSGSGSG+GY
Sbjct: 28  GNMPGESGSGRGPNWEYNWGWGSAPGSGWGYGAGSGRSPTGWGRGSGYGYGSGSGSGTGY 87

Query: 114 GYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGG 148
           GYGSG GGA GGGYG GSG G SGGGG GGG+ G
Sbjct: 88  GYGSGGGGARGGGYGYGSGNGRSGGGGGGGGFNG 121

[Close]

BLAST of CSPI04G04270 vs. NCBI nr
Match: gi|449458319|ref|XP_004146895.1| (PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 3.2e-78
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60
           MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY
Sbjct: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60

Query: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
           GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG
Sbjct: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120

Query: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
Sbjct: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 166

[Close]

BLAST of CSPI04G04270 vs. NCBI nr
Match: gi|659107755|ref|XP_008453841.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 7.7e-72
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 1


Query: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60
           MK+PSKFHLSSLFFLLFVLTSSSTVS  ATPRKLLNFPDMSWGSP+ GGGGGNGNPTGAY
Sbjct: 1   MKQPSKFHLSSLFFLLFVLTSSSTVSGAATPRKLLNFPDMSWGSPN-GGGGGNGNPTGAY 60

Query: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
           GSGH PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG
Sbjct: 61  GSGHAPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120

Query: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           GAHGGGYGSGSGYGNSGGGG GGGYGGPSGDEYRSP TTRDKNRQG
Sbjct: 121 GAHGGGYGSGSGYGNSGGGGGGGGYGGPSGDEYRSPTTTRDKNRQG 165

[Close]

BLAST of CSPI04G04270 vs. NCBI nr
Match: gi|593685994|ref|XP_007143668.1| (hypothetical protein PHAVU_007G091400g [Phaseolus vulgaris])

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 104/155 (67.10%), Postives = 116/155 (74.84%), Query Frame = 1


Query: 12  LFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYN 71
           L FL F +TS++T + G   RKLL F   S G+PS      +G PTGA GSGHG NWDY+
Sbjct: 12  LLFLFFFITSTATAT-GPAGRKLL-FDMPSGGAPS------SGTPTGATGSGHGANWDYS 71

Query: 72  WGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGS 131
           WGWGS P +G+GFGSGSGRSPTGF +G GYG+GSGSGSGSGYGYGSGSGGA GGGYGSGS
Sbjct: 72  WGWGSGPATGYGFGSGSGRSPTGFARGSGYGYGSGSGSGSGYGYGSGSGGARGGGYGSGS 131

Query: 132 GYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           G GNSGGGG GGG GG  GD  R P T+R KN  G
Sbjct: 132 GSGNSGGGGYGGGNGG--GDNNRMPSTSRSKNNHG 156

[Close]

BLAST of CSPI04G04270 vs. NCBI nr
Match: gi|702488028|ref|XP_010034981.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Eucalyptus grandis])

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 14  FLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWG 73
           FL+F + ++   S   +  + L+ P+MS G       GG G+P GA GSGHGPNWDY+WG
Sbjct: 11  FLIFAVFAAIAFSSPVSSARTLDLPEMSTGPT-----GGTGSPDGASGSGHGPNWDYSWG 70

Query: 74  WGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGY 133
           WGSSPGSGWG+GSGSG SPTGFGKG+GYGFGSG+GSGSG+GYGSG GGAHGGG G  SG 
Sbjct: 71  WGSSPGSGWGYGSGSGHSPTGFGKGFGYGFGSGTGSGSGFGYGSGGGGAHGGGSGYESGS 130

Query: 134 GNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQ 166
           G SGG G+GGG G   G   +SP   RD++ +
Sbjct: 131 GRSGGAGAGGGSGNSGGSGGKSPSYPRDRDHR 157

[Close]

BLAST of CSPI04G04270 vs. NCBI nr
Match: gi|951021796|ref|XP_014512764.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Vigna radiata var. radiata])

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 99/155 (63.87%), Postives = 113/155 (72.90%), Query Frame = 1


Query: 12  LFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYN 71
           L FL F +TS+ T + G   RKLL   DMS      GG   +GNPTG  GSG G NW+Y+
Sbjct: 10  LLFLFFFVTST-TAATGPAGRKLLF--DMS-----SGGAPSSGNPTGGTGSGRGANWEYS 69

Query: 72  WGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGS 131
           WGWGS PG+G+GFGSGSGRSPTGF +GYGYG+GSGSGSGSGYGYG GSGGA GGGYGSG+
Sbjct: 70  WGWGSGPGTGYGFGSGSGRSPTGFARGYGYGYGSGSGSGSGYGYGWGSGGARGGGYGSGN 129

Query: 132 GYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG 167
           G GN+GGGG GGG GG  GD  R P  ++ KN  G
Sbjct: 130 GSGNNGGGGYGGGNGG--GDNNRIPSASKSKNNHG 154

The following BLAST results are available for this feature:

BLAST of CSPI04G04270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G04270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXP2_CUCSA	2.3e-78	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025120 PE=4 SV=1	[more]
V7BCU6_PHAVU	7.1e-32	67.10	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G091400g PE=4 SV=1	[more]
A0A058ZYU9_EUCGR	2.5e-29	59.87	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00118 PE=4 SV=1	[more]
A9PEI8_POPTR	3.7e-28	60.76	Glycine-rich family protein OS=Populus trichocarpa GN=POPTR_0012s11590g PE=2 SV=...	[more]
A0A0S3SNR5_PHAAN	8.1e-28	63.23	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G103900 PE=...	[more]

BLAST of CSPI04G04270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61660.1	2.6e-25	76.60	glycine-rich protein	[more]

BLAST of CSPI04G04270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458319\|ref\|XP_004146895.1\|	3.2e-78	100.00	PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
gi\|659107755\|ref\|XP_008453841.1\|	7.7e-72	95.18	PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]	[more]
gi\|593685994\|ref\|XP_007143668.1\|	1.0e-31	67.10	hypothetical protein PHAVU_007G091400g [Phaseolus vulgaris]	[more]
gi\|702488028\|ref\|XP_010034981.1\|	3.6e-29	59.87	PREDICTED: putative glycine-rich cell wall structural protein 1 [Eucalyptus gran...	[more]
gi\|951021796\|ref\|XP_014512764.1\|	1.8e-28	63.87	PREDICTED: putative glycine-rich cell wall structural protein 1 [Vigna radiata v...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G04270.1	CSPI04G04270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..27 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G04270	Csa4G025120	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G04270	CsaV3_4G004360	Cucumber (Chinese Long) v3	cpicucB213

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G04270	Cucumber (Chinese Long) v3	cpicucB234
CSPI04G04270	Watermelon (97103) v2	cpiwmbB274
CSPI04G04270	Watermelon (97103) v2	cpiwmbB326
CSPI04G04270	Wax gourd	cpiwgoB378
CSPI04G04270	Wild cucumber (PI 183967)	cpicpiB156
CSPI04G04270	Cucumber (Gy14) v1	cgycpiB103
CSPI04G04270	Cucurbita maxima (Rimu)	cmacpiB337
CSPI04G04270	Cucurbita maxima (Rimu)	cmacpiB716
CSPI04G04270	Cucurbita moschata (Rifu)	cmocpiB328
CSPI04G04270	Cucurbita moschata (Rifu)	cmocpiB604
CSPI04G04270	Cucurbita moschata (Rifu)	cmocpiB708
CSPI04G04270	Cucumber (Chinese Long) v2	cpicuB194
CSPI04G04270	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G04270	Watermelon (Charleston Gray)	cpiwcgB298
CSPI04G04270	Watermelon (Charleston Gray)	cpiwcgB336
CSPI04G04270	Watermelon (97103) v1	cpiwmB315
CSPI04G04270	Cucurbita pepo (Zucchini)	cpecpiB220
CSPI04G04270	Cucurbita pepo (Zucchini)	cpecpiB398
CSPI04G04270	Cucurbita pepo (Zucchini)	cpecpiB731
CSPI04G04270	Bottle gourd (USVL1VR-Ls)	cpilsiB243
CSPI04G04270	Bottle gourd (USVL1VR-Ls)	cpilsiB303
CSPI04G04270	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G04270	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G04270	Cucumber (Gy14) v2	cgybcpiB222
CSPI04G04270	Silver-seed gourd	carcpiB0408
CSPI04G04270	Silver-seed gourd	carcpiB0746
CSPI04G04270	Silver-seed gourd	carcpiB0906