CSPI04G03820 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G03820
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unplaced genomic scaffold supercont1.21, whole genome shotgun sequence
Location	Chr4 : 2371085 .. 2374100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAAAAATGGTGGGTTTAGAAAATGCAGACAAGTCTTCTCTTCGAAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAATAAGCCTAGGAACGCCAAGAAGAGAAAGCCCGATGTGAACCACAATCGCCATGCTCAAGAGACCACAAATGGTAGTGAAGCCATTGCATCAGAGCCACTTCCATTGGAGCCCTTCAGCTTTTTCCTGAATGAGTTCCAAACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGATTCCATGAAAGGTGCTTTACTAATCTGTGTCATATTCTTATTCTTTTTCCATGGAATATAATGTAATATGTTTTGTAGTGTTTAATTGTATTCGGCATCCATTTTTTCTTTTCTGAATGCGTCAGAATTTATCTGGTTTTTGTTATGATTGAAATTTTTTGTAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATGTTAAGGAAGCTTTTGGATCGTCGTGGAAAGAAATTCTATGTAAGGGGGAACTCTTGGAAGGACGGACTGAACCTGGGAGTCCTGCAGTTCTTATAATCAGTACATCTGCACTTAGGTCGATTGAACTTTTAAAGTAAGATGGATAATTTTTTTCTGCTAGTATGTTTTTGAAATAAGTGCGTGCTTTTGTTTAACTCATTTATATTTATTAGGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTAGGTGGAAGTTTCTTTCCATGATATTTTCTCTTTTAGATGATTCTGAGATAGGGGTAACATATGTTTTTGTTGTTTGATGATGTTTCAAGTTGTATGGTTTACCAATTCTTTCAATTGAATGCTTGTTGTATATCAACGCTAAACAGAGTGTGGATGATAATTGTTTATATTTTGCTATCTGGAACAAGTGGGAAGAGTTCTTGATATGTTTTAAGAGGCCTGAAGTAGTCATTCTTTTCTTTATGTTGAAAACCTCGTAGTTTCAAAATTTTGTTTGGGAGATGAAGATAATTCAAAAAACCATCTGAGGCAAAAACACTGCTGAATTTAATGGTTTGCACGTCAGTCTGATCCTGTATTTTCATTACCTTTGCTTTTAATTTTCCTGATTTCTGAAACTGATCTTATCTTATCTTTGTGATTCATTCCAGTTTTGATCTTCATGGTCACATGATTAATTTTGTGAGAAGTGTTTGTTATACACTGCTTCTCTTCATGAGCTTGGAAAGCTCAAGCAGTGATTTAGCTTCTTGATTCTTCAACACATAACAAGTAACATTATTCAGCATTAGCAATTGGTGATTTTTATGGCTCTATTCTTTTTTTGGTAACTGGGTGTCCTGGCCAATTAGTGGTTTCCATGTGCATCCATGCAACTGCTTTTCTTTATTTTGTTTGGGAAGTGATGACAAACTAGAAAAGTTTCTCAGATGCAGTTGCTATGCTGAACTTTTTATTTGCACGTCAGTCTGATCCCGTTTTCTCAATAACATGGTTGTCATTTCTGAGCTTATGAATGCTAGACTTGAATTTTTCTTGTTATTTTTAATGGTTTTTTAAAAAACAAGGATATAGAATTGGCATTTTTGCATTCCCCGTTGACCTCTTCAAACAATCATTAACATCCTTAACTTTTCCTTTAAATTTTTTGCGTTCCCTCTTCTTTTTGTTTTCTTACATCCATTTTGGACACAGATCTCTTATTTTTATGTGAAATCTTCAACTGAACTCCCAATATTATTTTCAGTTGGAAATTTTTATGGTGATCACAATTATGTTATCTTATTTTTAAAGTATGGGAAATGAAGACAAATTGAAAATTTCATCAGAGGTAGATACTATGCTGAACTCTATTGCACGTCAGTCTGATCCCTATAATTGTTTATTGGGTGTAATCTATGCGATTATTACATAAAGTATTTTTTGGGTCCAAGATGAAAGGGGGGATGGGGCAATTCCAGGTTTTGTTATTCTGTTGTGATTTAGATAATTCCGTCTAGTTCACATTTCTGCTGAATTCGTTCAAGATCCTTTTGAATTGTGCAAAATTGTTTCAAATGACATCTAATTTCAATTGTGTCTCTAACCATCTGTGTAATGCAACATTACTTGGTGGTTTTTCTTAAAACATCCAATTGTCGGTTTTGGTTTTCATATCTCTTGAACTGTTATTGTTATTCCCTTTATGATGGGTGCAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACACCGAGCAGGTTAGGCTTTTTTTGTATTGGGTTTATCGTTCAGGAATTCTAGTTCCAGATTTTGTTTCTAATGGAGTACTGTTGAGCATCTATATTGATTATCTACATTCTTCCGGGATCTATCTCTTCTCATATACATACTCTTCTGTGTCTATTTTAGGATTAAAAAATTGATTGACATTGAGGCGTTGGGGCTGTCAAGACTAGCCGTCATTGTGCTGGACGTTCAACCAGATGTCAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGGTTTGAAAACCTCCTTTATATAACTTGTCTCAACTTCCTCGATCTATGTTCAAATTAGAAGAGAATGTTTTTATATAAATAGCTGCTCATAAAATTCATATTGCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGGATAGTCGAGGGTGAGCTGCGAATTTGCCTCTTTGGACCTTTACAACCTACTCGTAAACGAAGAAAAAAGGGAATTTAGTTATTGTTAATGCATCCTCAAAATTCATCAGTTCCCTCAAATTATCTTTCATCACTTGATCATTTTTCCCCAACTTCCGTTTCATTCCTATAATTCCGATTTGGTTTGTTGTACCAAAATTTTGCAATCTGAGCTGAGAGTCAATTTTGAAGTCAAGCTGTGTGAAATATTACATTGTGTAATAGATTTTGGAATTATGTATAAATTATTCACCTTTTCTAA

mRNA sequence

ATGGTGGGTTTAGAAAATGCAGACAAGTCTTCTCTTCGAAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAATAAGCCTAGGAACGCCAAGAAGAGAAAGCCCGATGTGAACCACAATCGCCATGCTCAAGAGACCACAAATGGTAGTGAAGCCATTGCATCAGAGCCACTTCCATTGGAGCCCTTCAGCTTTTTCCTGAATGAGTTCCAAACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGATTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATGTTAAGGAAGCTTTTGGATCGTCGTGGAAAGAAATTCTATGTAAGGGGGAACTCTTGGAAGGACGGACTGAACCTGGGAGTCCTGCAGTTCTTATAATCAGTACATCTGCACTTAGGTCGATTGAACTTTTAAAGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACACCGAGCAGGATTAAAAAATTGATTGACATTGAGGCGTTGGGGCTGTCAAGACTAGCCGTCATTGTGCTGGACGTTCAACCAGATGTCAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGGATAGTCGAGGGTGAGCTGCGAATTTGCCTCTTTGGACCTTTACAACCTACTCGTAAACGAAGAAAAAAGGGAATTTAG

Coding sequence (CDS)

ATGGTGGGTTTAGAAAATGCAGACAAGTCTTCTCTTCGAAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAATAAGCCTAGGAACGCCAAGAAGAGAAAGCCCGATGTGAACCACAATCGCCATGCTCAAGAGACCACAAATGGTAGTGAAGCCATTGCATCAGAGCCACTTCCATTGGAGCCCTTCAGCTTTTTCCTGAATGAGTTCCAAACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGATTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATGTTAAGGAAGCTTTTGGATCGTCGTGGAAAGAAATTCTATGTAAGGGGGAACTCTTGGAAGGACGGACTGAACCTGGGAGTCCTGCAGTTCTTATAATCAGTACATCTGCACTTAGGTCGATTGAACTTTTAAAGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACACCGAGCAGGATTAAAAAATTGATTGACATTGAGGCGTTGGGGCTGTCAAGACTAGCCGTCATTGTGCTGGACGTTCAACCAGATGTCAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGGATAGTCGAGGGTGAGCTGCGAATTTGCCTCTTTGGACCTTTACAACCTACTCGTAAACGAAGAAAAAAGGGAATTTAG

Homology

[Close]

BLAST of CSPI04G03820 vs. Swiss-Prot
Match: CMS1_RAT (Protein CMSS1 OS=Rattus norvegicus GN=Cmss1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.5e-13
Identity = 49/149 (32.89%), Postives = 85/149 (57.05%), Query Frame = 1


Query: 112 AFGSSWKEILCKG-ELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSK 171
           +  S  KEI  K  +L +   E  S  +LI+ +SA+R++EL++   +   +   +KLF+K
Sbjct: 128 SLSSYLKEICPKWVKLRKTHNEKKSVLMLILCSSAVRALELIRSLTAFKGDAKVMKLFAK 187

Query: 172 HMKVEEQVQLLKNR-VNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQ-PDVKGYSLFSL 231
           H+KV+EQV+LL+ R +++  GTP RIK+L+  + L L+ L  +V D    D K   +  +
Sbjct: 188 HIKVQEQVKLLEKRAIHLGVGTPGRIKELVKQDGLNLNPLKFLVFDWNWRDQKLRRMMDI 247

Query: 232 PQVRDEFWDLYKSYLHPRIVEGELRICLF 258
           P++R E ++L    +        L++ LF
Sbjct: 248 PEIRKEVFELLDMGVFSLCKSDSLKLGLF 276

[Close]

BLAST of CSPI04G03820 vs. Swiss-Prot
Match: CMS1_MOUSE (Protein CMSS1 OS=Mus musculus GN=Cmss1 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.6e-13
Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 1


Query: 112 AFGSSWKEILCKG-ELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSK 171
           +  S  KEI  K  +L +   E  S  +LI+ +SA+R++EL++   +   +   +KLF+K
Sbjct: 128 SLSSYLKEICPKWVKLRKTHNEKKSVLMLILCSSAVRALELIRSLTAFKGDAKVMKLFAK 187

Query: 172 HMKVEEQVQLLKNRV-NIASGTPSRIKKLIDIEALGLSRLAVIVLDVQ-PDVKGYSLFSL 231
           H+KV+EQV+LL+ RV ++  GTP RIK+L+  + L L+ L  +V D    D K   +  +
Sbjct: 188 HIKVQEQVKLLEKRVIHLGVGTPGRIKELVKQDGLHLNPLKFLVFDWNWRDQKLRRMMDI 247

Query: 232 PQVRDEFWDLYKSYLHPRIVEGELRICLF 258
           P++R E ++L    +        L++ LF
Sbjct: 248 PEIRKEVFELLDMGVFSLCKSDSLKLGLF 276

[Close]

BLAST of CSPI04G03820 vs. Swiss-Prot
Match: CMS1_DANRE (Protein CMSS1 OS=Danio rerio GN=cmss1 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.9e-13
Identity = 70/242 (28.93%), Postives = 116/242 (47.93%), Query Frame = 1


Query: 20  KQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPLEPFSFFLNEFQTANDVQVS 79
           ++R   KP N   +    N  R  ++ T      +S+P+P  P               VS
Sbjct: 66  QERSEEKPDNESNK----NKKRRKKKKTITDVLTSSKPVPGSPVDL------------VS 125

Query: 80  SLELDSMKDRCILGPPESSVQDDKSL-VKHVKEAFGSSWKEILCK-GELLEGRTEPGSPA 139
            L+    + R ++   E ++QD   L    +  +  S  KE+  K  ++ +  T+  S  
Sbjct: 126 LLKTYHSQTRSVIEQEELTLQDSCFLSCNDLTHSLSSYLKEVCPKWAKMQKQHTQTSSVV 185

Query: 140 VLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQ-LLKNRVNIASGTPSRIK 199
           +LI+  SALR+I+L+K   +   +   +KLF+KH+KVEEQ++ L K   +IA GTP RI 
Sbjct: 186 LLIVCGSALRTIDLIKQLVTFKGQAKVLKLFAKHIKVEEQIKSLSKGVTHIAVGTPGRIC 245

Query: 200 KLIDIEALGLSRLAVIVLDVQ-PDVKGYSLFSLPQVRDEFWDLYKSYLHPRIVEGELRIC 258
            L++ E L +  L  +VLD    D K   +  +P+V+ +   +    L     EG ++I 
Sbjct: 246 ALLEKEGLTVQGLRYLVLDWNYRDQKQRRMVDVPEVKGDLLKMMDQGLIQSCREGTVKIG 291

[Close]

BLAST of CSPI04G03820 vs. Swiss-Prot
Match: CMS1_XENLA (Protein CMSS1 OS=Xenopus laevis GN=cmss1 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 71/253 (28.06%), Postives = 123/253 (48.62%), Query Frame = 1


Query: 9   KSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPLEPFSFFLN 68
           K S  +  NK+K+ P  K +  +K++  V+     +++    +    + +  +  +    
Sbjct: 27  KESEESKGNKKKKIPSGKTQVKRKKEVKVSQEAEKEDSAPKKKRRKKKTIS-DVLAQHAP 86

Query: 69  EFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKH-VKEAFGSSWKEILCK-GEL 128
              T  D+Q   LE    K R ++   E  + D   + ++ +     S  KEI  K  +L
Sbjct: 87  TAGTPEDMQKLVLEHFENK-RSVIELEELQIPDTCFVKENDLTHTLSSYLKEICPKWSKL 146

Query: 129 LEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQLL-KNRV 188
            +   E  S  +L++ +SA R++EL+K   +   +   +KLF+KH+K+++Q+ LL KN  
Sbjct: 147 SKNHKEKKSVLLLVVCSSAHRTLELIKLINAFKADTKVMKLFAKHIKIKDQINLLEKNVT 206

Query: 189 NIASGTPSRIKKLIDIEALGLSRLAVIVLDVQ-PDVKGYSLFSLPQVRDEFWDLYKSYLH 248
           +I  GTP RIK LID + L L  +  +V D    D K   +  +P+V+ E  +L  S L 
Sbjct: 207 HIGIGTPGRIKALIDQDGLSLESMKYLVFDWNWRDQKLRRMMDIPEVKKETLELLDSGLI 266

Query: 249 PRIVEGELRICLF 258
                G L+I LF
Sbjct: 267 RASRAGTLKIGLF 277

[Close]

BLAST of CSPI04G03820 vs. Swiss-Prot
Match: CMS1_HUMAN (Protein CMSS1 OS=Homo sapiens GN=CMSS1 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-11
Identity = 69/248 (27.82%), Postives = 118/248 (47.58%), Query Frame = 1


Query: 15  PRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLP--LEPFSFFLNEFQT 74
           P  K KQ         K+RK +    R  ++         SEP P   E     + ++ +
Sbjct: 45  PSEKTKQPKECFLIQPKERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYS 104

Query: 75  ANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEILCKG-ELLEGRT 134
           +  + +   EL+ + D C L   +            +  +  S  KEI  K  +L +  +
Sbjct: 105 SRRLVIELEELN-LPDSCFLKAND------------LTHSLSSYLKEICPKWVKLRKNHS 164

Query: 135 EPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQLLKNR-VNIASG 194
           E  S  +LII +SA+R++EL++   +   +   +KLF+KH+KV+ QV+LL+ R V++  G
Sbjct: 165 EKKSVLMLIICSSAVRALELIRSMTAFRGDGKVIKLFAKHIKVQAQVKLLEKRVVHLGVG 224

Query: 195 TPSRIKKLIDIEALGLSRLAVIVLDVQ-PDVKGYSLFSLPQVRDEFWDLYKSYLHPRIVE 254
           TP RIK+L+    L LS L  +V D    D K   +  +P++R E ++L +  +      
Sbjct: 225 TPGRIKELVKQGGLNLSPLKFLVFDWNWRDQKLRRMMDIPEIRKEVFELLEMGVLSLCKS 279

Query: 255 GELRICLF 258
             L++ LF
Sbjct: 285 ESLKLGLF 279

[Close]

BLAST of CSPI04G03820 vs. TrEMBL
Match: A0A0A0KUA9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017160 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.4e-147
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 1


Query: 1   MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL 60
           MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL
Sbjct: 1   MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL 60

Query: 61  EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI 120
           EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI
Sbjct: 61  EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI 120

Query: 121 LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL 180
           LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL
Sbjct: 121 LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL 180

Query: 181 LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK 240
           LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK
Sbjct: 181 LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK 240

Query: 241 SYLHPRIVEGELRICLFGPLQPTRKRRKKGI 272
           SYLHPRIVEGELRICLFGPLQPTRKRRKK I
Sbjct: 241 SYLHPRIVEGELRICLFGPLQPTRKRRKKEI 271

[Close]

BLAST of CSPI04G03820 vs. TrEMBL
Match: M5XLJ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009444mg PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-79
Identity = 169/280 (60.36%), Postives = 205/280 (73.21%), Query Frame = 1


Query: 5   ENADKSSLRNPRNKRKQRPPN--KPRNAKKRKPDVNH---------NRHAQETTNG---S 64
           +N  K SLRNP+NK K   PN  K +  KK+K  VN+         N++ Q + N    S
Sbjct: 7   KNLSKLSLRNPKNKGKPLGPNNTKRQKEKKKKQRVNNQNPIEDKATNQNTQNSNNNNSLS 66

Query: 65  EAIASEPLPLEP-FSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHV 124
            A  ++P       SFFL++FQ+ N V++SSLEL+S+ D+CIL   ES  QD   L KHV
Sbjct: 67  NATKAQPASASAQLSFFLDQFQSGNGVKISSLELESVNDKCILDLSESLDQDVTLLGKHV 126

Query: 125 KEAFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFS 184
             AFG SWKE LC+  LL G+ +PGSPA+LIISTSALRSIELL+G R++T+ECHA KLFS
Sbjct: 127 MAAFGPSWKEELCEKHLLNGKIDPGSPAILIISTSALRSIELLRGLRALTKECHAAKLFS 186

Query: 185 KHMKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLP 244
           KHMKVEEQV LLKNRVNIASGTP+RIKKLIDIEALGLSRL+VIVLD  PDVKGYSLF+LP
Sbjct: 187 KHMKVEEQVSLLKNRVNIASGTPNRIKKLIDIEALGLSRLSVIVLDTHPDVKGYSLFTLP 246

Query: 245 QVRDEFWDLYKSYLHPRIVEGELRICLFGPLQPTRKRRKK 270
           QVRDEFWDLYKSY H R+++G LR+ L+GPL    + + K
Sbjct: 247 QVRDEFWDLYKSYFHDRLLQGSLRLGLYGPLSSGNELKGK 286

[Close]

BLAST of CSPI04G03820 vs. TrEMBL
Match: A0A061EKJ3_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020062 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.8e-78
Identity = 158/269 (58.74%), Postives = 205/269 (76.21%), Query Frame = 1


Query: 9   KSSLRNPRNKRKQRPPNK--PRN-AKKRKPDVNHNRHAQET-----------TNGSEAIA 68
           +++ +NPRN RK   P    P++ +KK+K   N+N H  +T             G+ +  
Sbjct: 18  QNARQNPRNNRKPLGPKSDIPKSKSKKKKKTKNNNNHQNDTDPIETKNKTTVVTGNNSNN 77

Query: 69  SEPLPLEP---FSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKE 128
           + P P  P    S+FL++FQ+AN VQ+SSLEL+S+KD CIL   + S QD   L K++KE
Sbjct: 78  ARPPPATPRQQLSYFLSQFQSANGVQLSSLELESIKDSCILDVSQESGQDVMRLEKYIKE 137

Query: 129 AFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKH 188
           AFG+ WKE LC+G+L+ G+TE GSPAVL+++TSALRSIELL+G RS T+EC AVKLFSKH
Sbjct: 138 AFGAKWKEELCEGKLIGGKTEAGSPAVLVVATSALRSIELLRGMRSFTKECCAVKLFSKH 197

Query: 189 MKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQV 248
           MK++EQV LLKNRVNIASGTPSRIKKLIDIEALGLSRL++I+LD+  DVKGYSL +LPQV
Sbjct: 198 MKIDEQVSLLKNRVNIASGTPSRIKKLIDIEALGLSRLSLILLDIHTDVKGYSLLTLPQV 257

Query: 249 RDEFWDLYKSYLHPRIVEGELRICLFGPL 261
           RDEFWDLYK+Y H ++V+G+LRICL+GP+
Sbjct: 258 RDEFWDLYKNYFHQQVVQGDLRICLYGPI 286

[Close]

BLAST of CSPI04G03820 vs. TrEMBL
Match: A0A061EJS9_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_020062 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-76
Identity = 158/270 (58.52%), Postives = 205/270 (75.93%), Query Frame = 1


Query: 9   KSSLRNPRNKRKQRPPNK--PRN-AKKRKPDVNHNRHAQET-----------TNGSEAIA 68
           +++ +NPRN RK   P    P++ +KK+K   N+N H  +T             G+ +  
Sbjct: 18  QNARQNPRNNRKPLGPKSDIPKSKSKKKKKTKNNNNHQNDTDPIETKNKTTVVTGNNSNN 77

Query: 69  SEPLPLEP---FSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKE 128
           + P P  P    S+FL++FQ+AN VQ+SSLEL+S+KD CIL   + S QD   L K++KE
Sbjct: 78  ARPPPATPRQQLSYFLSQFQSANGVQLSSLELESIKDSCILDVSQESGQDVMRLEKYIKE 137

Query: 129 AFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKH 188
           AFG+ WKE LC+G+L+ G+TE GSPAVL+++TSALRSIELL+G RS T+EC AVKLFSKH
Sbjct: 138 AFGAKWKEELCEGKLIGGKTEAGSPAVLVVATSALRSIELLRGMRSFTKECCAVKLFSKH 197

Query: 189 MKV-EEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQ 248
           MK+ E+QV LLKNRVNIASGTPSRIKKLIDIEALGLSRL++I+LD+  DVKGYSL +LPQ
Sbjct: 198 MKIDEQQVSLLKNRVNIASGTPSRIKKLIDIEALGLSRLSLILLDIHTDVKGYSLLTLPQ 257

Query: 249 VRDEFWDLYKSYLHPRIVEGELRICLFGPL 261
           VRDEFWDLYK+Y H ++V+G+LRICL+GP+
Sbjct: 258 VRDEFWDLYKNYFHQQVVQGDLRICLYGPI 287

[Close]

BLAST of CSPI04G03820 vs. TrEMBL
Match: A0A067LFJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23821 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.9e-76
Identity = 156/270 (57.78%), Postives = 202/270 (74.81%), Query Frame = 1


Query: 9   KSSLRNPR-----NKRKQRPPN----KPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLP 68
           K+S +NP+      K+K++PP     K +N KK+   + +N + +   N +    +    
Sbjct: 15  KASFKNPKIDNNFKKKKKQPPTLKAEKKKNKKKKVHQIKNNDNNEIINNNNNNELTPTSV 74

Query: 69  LEPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKE 128
            +  SFF+NEF++AND+Q+SSLEL+S+K+   +  P    QD KSL K ++ AFG SWKE
Sbjct: 75  SQELSFFVNEFESANDLQLSSLELESIKETSFVELP----QDVKSLGKQIQAAFGPSWKE 134

Query: 129 ILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQ 188
           +LC+G+L+EG+ E G+P+VLIISTSALR IELL+G R +T+ECHAVKLFSKHMK+EEQV 
Sbjct: 135 VLCEGQLVEGKIEAGNPSVLIISTSALRCIELLRGVRPLTKECHAVKLFSKHMKIEEQVA 194

Query: 189 LLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLY 248
           LLKNRVN ASGTPSR+KKLIDIEALGLSRLAVIVLD+  DVKGYSL +LPQVRDEFWDLY
Sbjct: 195 LLKNRVNFASGTPSRLKKLIDIEALGLSRLAVIVLDIHTDVKGYSLLTLPQVRDEFWDLY 254

Query: 249 KSYLHPRIVEGELRICLFGPLQPTRKRRKK 270
           K+Y H R+++ +LRICLFGPL    + R K
Sbjct: 255 KNYFHQRLLQRDLRICLFGPLLNGNQLRGK 280

[Close]

BLAST of CSPI04G03820 vs. TAIR10
Match: AT2G43110.1 (AT2G43110.1 unknown protein)

HSP 1 Score: 264.6 bits (675), Expect = 6.6e-71
Identity = 145/278 (52.16%), Postives = 196/278 (70.50%), Query Frame = 1


Query: 10  SSLRNP-RNKRKQRPPNKPRNAKKRK--------------PDVNHNRHAQETTNGSE--A 69
           S+++NP RN+R    P K    KK K                +  +R   + T+  E   
Sbjct: 9   SAVKNPKRNRRPSHGPKKDLKKKKTKITKKTKKSKAPTFDKTIEKSRSNDQKTDNDEDEQ 68

Query: 70  IASEPLPL-EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKE 129
           + SEP+   E  ++FLN   +A  ++VSSLEL+ +KD CI+   +   QD  +L +H+K 
Sbjct: 69  LYSEPVSASEQLNYFLNHLDSAIGIKVSSLELEPIKDTCIVELSQGLDQDVSNLGEHIKL 128

Query: 130 AFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKH 189
           + GSSW+E LC+GE LE + EPG+P+VL+IS+SALRS+ELL+G  S+T++C AVKLFSKH
Sbjct: 129 SCGSSWRETLCEGESLERKVEPGNPSVLVISSSALRSLELLRGLHSLTKQCPAVKLFSKH 188

Query: 190 MKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQV 249
           +KVEEQV LLK RVNI SGTP+RIKKL+DIEALGLSRL +IV+D+ PDVKG+SLF+LPQV
Sbjct: 189 LKVEEQVSLLKKRVNIGSGTPNRIKKLVDIEALGLSRLDMIVIDMHPDVKGFSLFTLPQV 248

Query: 250 RDEFWDLYKSYLHPRIVEGELRICLFGPLQPTRKRRKK 270
           RDEFWDLYK+  H R++EG LRIC++GP +P+   +KK
Sbjct: 249 RDEFWDLYKNCFHQRVLEGRLRICMYGP-KPSPNLKKK 285

[Close]

BLAST of CSPI04G03820 vs. NCBI nr
Match: gi|449468740|ref|XP_004152079.1| (PREDICTED: protein CMSS1 [Cucumis sativus])

HSP 1 Score: 528.1 bits (1359), Expect = 9.1e-147
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 1


Query: 1   MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL 60
           MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL
Sbjct: 1   MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL 60

Query: 61  EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI 120
           EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI
Sbjct: 61  EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI 120

Query: 121 LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL 180
           LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL
Sbjct: 121 LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL 180

Query: 181 LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK 240
           LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK
Sbjct: 181 LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK 240

Query: 241 SYLHPRIVEGELRICLFGPLQPTRKRRKKGI 272
           SYLHPRIVEGELRICLFGPLQPTRKRRKK I
Sbjct: 241 SYLHPRIVEGELRICLFGPLQPTRKRRKKEI 271

[Close]

BLAST of CSPI04G03820 vs. NCBI nr
Match: gi|659107923|ref|XP_008453922.1| (PREDICTED: protein CMSS1 [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 8.8e-142
Identity = 258/271 (95.20%), Postives = 264/271 (97.42%), Query Frame = 1


Query: 1   MVGLENADKSSLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQETTNGSEAIASEPLPL 60
           MVGLENAD +SLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQ  TN SE IASEPLPL
Sbjct: 1   MVGLENADNASLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQNATNSSEIIASEPLPL 60

Query: 61  EPFSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKEAFGSSWKEI 120
           EPFSFFLNEFQTANDVQVSSLEL+SMKDRCILGPPESSVQDDKSLVKH+KEA GSSWKE+
Sbjct: 61  EPFSFFLNEFQTANDVQVSSLELESMKDRCILGPPESSVQDDKSLVKHIKEALGSSWKEV 120

Query: 121 LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL 180
           LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL
Sbjct: 121 LCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQL 180

Query: 181 LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK 240
           LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK
Sbjct: 181 LKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYK 240

Query: 241 SYLHPRIVEGELRICLFGPLQPTRKRRKKGI 272
           SYLHPR+VEGELRICLFGPLQPTRKRRKK +
Sbjct: 241 SYLHPRVVEGELRICLFGPLQPTRKRRKKEV 271

[Close]

BLAST of CSPI04G03820 vs. NCBI nr
Match: gi|645232023|ref|XP_008222671.1| (PREDICTED: protein CMSS1 [Prunus mume])

HSP 1 Score: 307.0 bits (785), Expect = 3.3e-80
Identity = 170/280 (60.71%), Postives = 207/280 (73.93%), Query Frame = 1


Query: 5   ENADKSSLRNPRNKRKQRPPN--KPRNAKKRKPDVNH---------NRHAQETTNG---S 64
           +N  K SLRNP+NK K   PN  K +  KK+K  VN+         N++ Q + N    S
Sbjct: 7   KNHSKLSLRNPKNKGKPLGPNNTKRKKEKKKKQRVNNQNPIEDKASNQNTQNSNNNNSLS 66

Query: 65  EAIASEPLPLEP-FSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHV 124
            A  ++P       SFFL++FQ+ N V++SSLEL+S+ D+CIL   ES  QD   L KHV
Sbjct: 67  NATKAQPASASAQLSFFLDQFQSGNGVKISSLELESVNDKCILDLSESLDQDVSLLGKHV 126

Query: 125 KEAFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFS 184
             AFG SWKE LC+  LL+G+ +PGSPA+LIISTSALRSIELL+G RS+T+ECHA KLFS
Sbjct: 127 MAAFGPSWKEELCEKHLLDGKIDPGSPAILIISTSALRSIELLRGLRSLTKECHAAKLFS 186

Query: 185 KHMKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLP 244
           KHMKVEEQV LLKNRVNIASGTP+RIKKLIDIEALGLSRL+VIVLD+ PDVKGYSLF+LP
Sbjct: 187 KHMKVEEQVSLLKNRVNIASGTPNRIKKLIDIEALGLSRLSVIVLDMHPDVKGYSLFTLP 246

Query: 245 QVRDEFWDLYKSYLHPRIVEGELRICLFGPLQPTRKRRKK 270
           QVRDEFWDLYKSY H R+++G LR+ L+GPL    + + K
Sbjct: 247 QVRDEFWDLYKSYFHDRLLQGSLRLGLYGPLSSGNELKGK 286

[Close]

BLAST of CSPI04G03820 vs. NCBI nr
Match: gi|596287299|ref|XP_007225753.1| (hypothetical protein PRUPE_ppa009444mg [Prunus persica])

HSP 1 Score: 304.3 bits (778), Expect = 2.1e-79
Identity = 169/280 (60.36%), Postives = 205/280 (73.21%), Query Frame = 1


Query: 5   ENADKSSLRNPRNKRKQRPPN--KPRNAKKRKPDVNH---------NRHAQETTNG---S 64
           +N  K SLRNP+NK K   PN  K +  KK+K  VN+         N++ Q + N    S
Sbjct: 7   KNLSKLSLRNPKNKGKPLGPNNTKRQKEKKKKQRVNNQNPIEDKATNQNTQNSNNNNSLS 66

Query: 65  EAIASEPLPLEP-FSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHV 124
            A  ++P       SFFL++FQ+ N V++SSLEL+S+ D+CIL   ES  QD   L KHV
Sbjct: 67  NATKAQPASASAQLSFFLDQFQSGNGVKISSLELESVNDKCILDLSESLDQDVTLLGKHV 126

Query: 125 KEAFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFS 184
             AFG SWKE LC+  LL G+ +PGSPA+LIISTSALRSIELL+G R++T+ECHA KLFS
Sbjct: 127 MAAFGPSWKEELCEKHLLNGKIDPGSPAILIISTSALRSIELLRGLRALTKECHAAKLFS 186

Query: 185 KHMKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLP 244
           KHMKVEEQV LLKNRVNIASGTP+RIKKLIDIEALGLSRL+VIVLD  PDVKGYSLF+LP
Sbjct: 187 KHMKVEEQVSLLKNRVNIASGTPNRIKKLIDIEALGLSRLSVIVLDTHPDVKGYSLFTLP 246

Query: 245 QVRDEFWDLYKSYLHPRIVEGELRICLFGPLQPTRKRRKK 270
           QVRDEFWDLYKSY H R+++G LR+ L+GPL    + + K
Sbjct: 247 QVRDEFWDLYKSYFHDRLLQGSLRLGLYGPLSSGNELKGK 286

[Close]

BLAST of CSPI04G03820 vs. NCBI nr
Match: gi|590655450|ref|XP_007033991.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 299.3 bits (765), Expect = 6.9e-78
Identity = 158/269 (58.74%), Postives = 205/269 (76.21%), Query Frame = 1


Query: 9   KSSLRNPRNKRKQRPPNK--PRN-AKKRKPDVNHNRHAQET-----------TNGSEAIA 68
           +++ +NPRN RK   P    P++ +KK+K   N+N H  +T             G+ +  
Sbjct: 18  QNARQNPRNNRKPLGPKSDIPKSKSKKKKKTKNNNNHQNDTDPIETKNKTTVVTGNNSNN 77

Query: 69  SEPLPLEP---FSFFLNEFQTANDVQVSSLELDSMKDRCILGPPESSVQDDKSLVKHVKE 128
           + P P  P    S+FL++FQ+AN VQ+SSLEL+S+KD CIL   + S QD   L K++KE
Sbjct: 78  ARPPPATPRQQLSYFLSQFQSANGVQLSSLELESIKDSCILDVSQESGQDVMRLEKYIKE 137

Query: 129 AFGSSWKEILCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKH 188
           AFG+ WKE LC+G+L+ G+TE GSPAVL+++TSALRSIELL+G RS T+EC AVKLFSKH
Sbjct: 138 AFGAKWKEELCEGKLIGGKTEAGSPAVLVVATSALRSIELLRGMRSFTKECCAVKLFSKH 197

Query: 189 MKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQV 248
           MK++EQV LLKNRVNIASGTPSRIKKLIDIEALGLSRL++I+LD+  DVKGYSL +LPQV
Sbjct: 198 MKIDEQVSLLKNRVNIASGTPSRIKKLIDIEALGLSRLSLILLDIHTDVKGYSLLTLPQV 257

Query: 249 RDEFWDLYKSYLHPRIVEGELRICLFGPL 261
           RDEFWDLYK+Y H ++V+G+LRICL+GP+
Sbjct: 258 RDEFWDLYKNYFHQQVVQGDLRICLYGPI 286

The following BLAST results are available for this feature:

BLAST of CSPI04G03820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CMS1_RAT	3.5e-13	32.89	Protein CMSS1 OS=Rattus norvegicus GN=Cmss1 PE=1 SV=1	[more]
CMS1_MOUSE	4.6e-13	33.56	Protein CMSS1 OS=Mus musculus GN=Cmss1 PE=2 SV=1	[more]
CMS1_DANRE	5.9e-13	28.93	Protein CMSS1 OS=Danio rerio GN=cmss1 PE=2 SV=1	[more]
CMS1_XENLA	1.1e-11	28.06	Protein CMSS1 OS=Xenopus laevis GN=cmss1 PE=2 SV=1	[more]
CMS1_HUMAN	2.5e-11	27.82	Protein CMSS1 OS=Homo sapiens GN=CMSS1 PE=1 SV=2	[more]

BLAST of CSPI04G03820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUA9_CUCSA	6.4e-147	99.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017160 PE=4 SV=1	[more]
M5XLJ0_PRUPE	1.5e-79	60.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009444mg PE=4 SV=1	[more]
A0A061EKJ3_THECC	4.8e-78	58.74	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020062 PE=4 SV=1	[more]
A0A061EJS9_THECC	1.2e-76	58.52	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_020062 PE=4 SV=1	[more]
A0A067LFJ7_JATCU	5.9e-76	57.78	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23821 PE=4 SV=1	[more]

BLAST of CSPI04G03820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43110.1	6.6e-71	52.16	unknown protein	[more]

BLAST of CSPI04G03820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468740\|ref\|XP_004152079.1\|	9.1e-147	99.63	PREDICTED: protein CMSS1 [Cucumis sativus]	[more]
gi\|659107923\|ref\|XP_008453922.1\|	8.8e-142	95.20	PREDICTED: protein CMSS1 [Cucumis melo]	[more]
gi\|645232023\|ref\|XP_008222671.1\|	3.3e-80	60.71	PREDICTED: protein CMSS1 [Prunus mume]	[more]
gi\|596287299\|ref\|XP_007225753.1\|	2.1e-79	60.36	hypothetical protein PRUPE_ppa009444mg [Prunus persica]	[more]
gi\|590655450\|ref\|XP_007033991.1\|	6.9e-78	58.74	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G03820.1	CSPI04G03820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 134..215 score: 1.
None	No IPR available	PANTHER	PTHR24030:SF0	PROTEIN CMSS1	coord: 13..257 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G03820	Cla010741	Watermelon (97103) v1	cpiwmB315
CSPI04G03820	Csa4G017160	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G03820	MELO3C017672	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G03820	ClCG07G016700	Watermelon (Charleston Gray)	cpiwcgB336
CSPI04G03820	Lsi07G000880	Bottle gourd (USVL1VR-Ls)	cpilsiB303
CSPI04G03820	MELO3C017672.2	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G03820	CsaV3_4G003830	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G03820	Cla97C07G143700	Watermelon (97103) v2	cpiwmbB326
CSPI04G03820	Bhi01G002009	Wax gourd	cpiwgoB370
CSPI04G03820	Cucsa.094370	Cucumber (Gy14) v1	cgycpiB103
CSPI04G03820	CmaCh14G015110	Cucurbita maxima (Rimu)	cmacpiB263
CSPI04G03820	CmoCh14G015440	Cucurbita moschata (Rifu)	cmocpiB250
CSPI04G03820	Cp4.1LG03g12440	Cucurbita pepo (Zucchini)	cpecpiB617
CSPI04G03820	CsGy4G003700	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G03820	Carg24805	Silver-seed gourd	carcpiB1077

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G03820	Silver-seed gourd	carcpiB0730
CSPI04G03820	Cucurbita maxima (Rimu)	cmacpiB850
CSPI04G03820	Cucurbita moschata (Rifu)	cmocpiB833
CSPI04G03820	Cucurbita pepo (Zucchini)	cpecpiB871