CSPI04G02490 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G02490
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RING finger protein, putative
Location	Chr4 : 1452827 .. 1454631 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAACTCCACAAACAAAAACCCTCATCATCTTTTTTCTCTTAATGGGTCTCTCTTTTTTTCTCCTCTCAAACAAACACTTTGATGATCTCCTCTTCCATGGCTTCTCAAACTAACCATTTTTCTTCTCTTAATTCCTTCAATAATCTTATTCATTATCCTGTTCCATGGCTCTCCTCTCTCACTTTAAACACCTCCCCCTGATCAACCATACTACTCCTTCAACCACGGTCCCACCCGTTCCATTCCCGGGTTCTCCGATATGACAATGGTTGCTGCCCTAAACCACTTCTCCAAACACCATCACGGCGGCGCCGACCATCTCATGAATGGTGGTGCTCCACTTTGTAATCAATATTATTATTATTATTATTTAGGGTCTGATAATCCTTATCTAATTTCTCCTGATCCTCCCATGGCGGAAGATGATTCCACTACTAATAGTCTTAATCATGATCAAGCCCCTTCTAATAGAGATGATGGTTGGCTTCAATTAAGTATTGGTGGCAGCGGCAGCGGTGGCAACGTTACCGGACTAAAACGCGATCAACGAGAGTCGATGACATCCGAGAGAAGCTCGGGTTTAGTGGAGCTAGATCTATTACCTGGTAGCGGTCGAGATATCTCTATGAATTATTCTAGATGGGTTTCGGATTTCTCGAGCCCTGAGACTACTACGACGTCGAAAACGGAGACTGGGGCGGAGACAGGAATAGGGTTGCCTTTGTTTTTTGGAACTTCTAGTTCTTCCAACTTTGTACAGCAAGAGATTAATTGGGCATTTAGGCCGGTGACCGGTATTGGCACCGGTGTTCCTTCTTCTTCCTCCCCGTCGACATCGGCCGTGTCATCTTCTTATTCTCTACCGATGAGCGGCCGTCGGAGTTCTTACTTGGGAAGGCCATTAATCCAATTCCAGAGTCTTGGGGTCGACATGGCCACGGCAACGGCCGGGCCGAGTTCGGACGTCAGAATCATAAATCCTCCCCGCCGGCCCCATTCTGGTATATGGTTTACATTAAAAGCCTTAGAAAATCAGTAAGTGTAGAAAAAATTAAAATTTTAAAAAAGATGTATTTATATATATATATTCTTCTTCTTTAATTTCTTATATTAATTATTATATTTCATAATCAAATTATTCTCTAAAATTTTGATTTTGGTTTTGTTAATGCAGAGGAAAAGAGCCATTTTTGCCTCAAATATCAAAAAACTATCTGAGAATCAAGTGAGATTTTCTCTCTCTCTCTCTCTAATTAACCTAATTAAATTTCTCCTTTTTTATTTTTTATTTTTTACTTATTTATTTATTTGCCTTTGACTTTAATATCTCACTCTCTTCTTCTTCCCTTTTTCTTTCTCTTTTCCCCCTAATTTTGATTGAACTTTTAAAGTTGAAACCATAAAAGAATACTTAAAACTTTTTGGATCAATCATCTTTTTTTTTTGTTTTTTCTTTTGAAATGAATAGGGATGAAAAGATGACAGTTAGTTTGGTAATGAAGTACTTGGTTAATAAGCTTCATCTGGATAGCGAATCAGAGGTATTTATATACAATTAAACCTTTTTTTTTTGGTTTAATTAATTTCATTTACTACCCTATGAACATTTTAGGCTTTTATTCATTAGATTTTAATTATGGTGGAATATGATTGATTAATTACCATTAATTAATTGCTTTGTAGTTAATATGATATTTTGCATTTAAAGGTATTATTTGGATTTATGGTTTGGTGTTACTAACTTGATGGAAACATCAAAACTAAAATAGGGCTTCATTTAGGCTGTTCTATATCTTCTATAG

mRNA sequence

ATGACAATGGTTGCTGCCCTAAACCACTTCTCCAAACACCATCACGGCGGCGCCGACCATCTCATGAATGGTGGTGCTCCACTTTGTAATCAATATTATTATTATTATTATTTAGGGTCTGATAATCCTTATCTAATTTCTCCTGATCCTCCCATGGCGGAAGATGATTCCACTACTAATAGTCTTAATCATGATCAAGCCCCTTCTAATAGAGATGATGGTTGGCTTCAATTAAGTATTGGTGGCAGCGGCAGCGGTGGCAACGTTACCGGACTAAAACGCGATCAACGAGAGTCGATGACATCCGAGAGAAGCTCGGGTTTAGTGGAGCTAGATCTATTACCTGGTAGCGGTCGAGATATCTCTATGAATTATTCTAGATGGGTTTCGGATTTCTCGAGCCCTGAGACTACTACGACGTCGAAAACGGAGACTGGGGCGGAGACAGGAATAGGGTTGCCTTTGTTTTTTGGAACTTCTAGTTCTTCCAACTTTGTACAGCAAGAGATTAATTGGGCATTTAGGCCGGTGACCGGTATTGGCACCGGTGTTCCTTCTTCTTCCTCCCCGTCGACATCGGCCGTGTCATCTTCTTATTCTCTACCGATGAGCGGCCGTCGGAGTTCTTACTTGGGAAGGCCATTAATCCAATTCCAGAGTCTTGGGGTCGACATGGCCACGGCAACGGCCGGGCCGAGTTCGGACGTCAGAATCATAAATCCTCCCCGCCGGCCCCATTCTGGTATATGGTTTACATTAAAAGCCTTAGAAAATCAAGGAAAAGAGCCATTTTTGCCTCAAATATCAAAAAACTATCTGAGAATCAAGGATGAAAAGATGACAGTTAGTTTGGTAATGAAGTACTTGGTTAATAAGCTTCATCTGGATAGCGAATCAGAGGCTGTTCTATATCTTCTATAG

Coding sequence (CDS)

ATGACAATGGTTGCTGCCCTAAACCACTTCTCCAAACACCATCACGGCGGCGCCGACCATCTCATGAATGGTGGTGCTCCACTTTGTAATCAATATTATTATTATTATTATTTAGGGTCTGATAATCCTTATCTAATTTCTCCTGATCCTCCCATGGCGGAAGATGATTCCACTACTAATAGTCTTAATCATGATCAAGCCCCTTCTAATAGAGATGATGGTTGGCTTCAATTAAGTATTGGTGGCAGCGGCAGCGGTGGCAACGTTACCGGACTAAAACGCGATCAACGAGAGTCGATGACATCCGAGAGAAGCTCGGGTTTAGTGGAGCTAGATCTATTACCTGGTAGCGGTCGAGATATCTCTATGAATTATTCTAGATGGGTTTCGGATTTCTCGAGCCCTGAGACTACTACGACGTCGAAAACGGAGACTGGGGCGGAGACAGGAATAGGGTTGCCTTTGTTTTTTGGAACTTCTAGTTCTTCCAACTTTGTACAGCAAGAGATTAATTGGGCATTTAGGCCGGTGACCGGTATTGGCACCGGTGTTCCTTCTTCTTCCTCCCCGTCGACATCGGCCGTGTCATCTTCTTATTCTCTACCGATGAGCGGCCGTCGGAGTTCTTACTTGGGAAGGCCATTAATCCAATTCCAGAGTCTTGGGGTCGACATGGCCACGGCAACGGCCGGGCCGAGTTCGGACGTCAGAATCATAAATCCTCCCCGCCGGCCCCATTCTGGTATATGGTTTACATTAAAAGCCTTAGAAAATCAAGGAAAAGAGCCATTTTTGCCTCAAATATCAAAAAACTATCTGAGAATCAAGGATGAAAAGATGACAGTTAGTTTGGTAATGAAGTACTTGGTTAATAAGCTTCATCTGGATAGCGAATCAGAGGCTGTTCTATATCTTCTATAG

Homology

[Close]

BLAST of CSPI04G02490 vs. Swiss-Prot
Match: DRIP2_ARATH (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 1


Query: 244 RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 301
           R +  +WF+L A  NQ  E  LPQI  NYLRI+D  + VS + KYL+ KL L SE E
Sbjct: 305 RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDE 361

[Close]

BLAST of CSPI04G02490 vs. Swiss-Prot
Match: DRIP1_ARATH (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 1


Query: 244 RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 301
           R +  +WF+L A  +Q     LPQI  N+LRI+D   TVS + KYL+ KL L+SE+E
Sbjct: 306 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENE 362

[Close]

BLAST of CSPI04G02490 vs. Swiss-Prot
Match: DRIPH_ARATH (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana GN=At3g23060 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 1


Query: 186 SSSSPSTSAVSSSYSLPMSGRR---SSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPP 245
           S     T+  ++S S    G++    SY  RP I  ++  V+ A  T  P + V +    
Sbjct: 297 SGQKLKTNGAATSRSRKKKGKKPVEKSYSLRPRIGRRT--VNPAAGTTTPEAPVSVEEEM 356

Query: 246 R----RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSE 305
           +    R ++ +WF+LK  + Q  E  LP I+   +R+KD  MTVS + KYL+ KL L+SE
Sbjct: 357 KVEEGRNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESE 416

[Close]

BLAST of CSPI04G02490 vs. TrEMBL
Match: A0A0A0KYQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G008840 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 1.9e-168
Identity = 300/304 (98.68%), Postives = 301/304 (99.01%), Query Frame = 1


Query: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEDDSTTN 60
           MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAE DSTTN
Sbjct: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEGDSTTN 60

Query: 61  SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD 120
           SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD
Sbjct: 61  SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD 120

Query: 121 ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI 180
           ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI
Sbjct: 121 ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI 180

Query: 181 GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN 240
           GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN
Sbjct: 181 GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN 240

Query: 241 PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 300
           PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE
Sbjct: 241 PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 300

Query: 301 AVLY 305
             +Y
Sbjct: 301 VFIY 304

[Close]

BLAST of CSPI04G02490 vs. TrEMBL
Match: A0A061E508_THECC (RING finger protein, putative OS=Theobroma cacao GN=TCM_008415 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.2e-46
Identity = 150/330 (45.45%), Postives = 184/330 (55.76%), Query Frame = 1


Query: 1   MTMVAALNHFSKHH--HGGADHLMNGGAPLCNQYY------------YYYY----LGSDN 60
           MTMV A N  ++HH  HGG      G    C   Y            Y Y+    LGSD 
Sbjct: 1   MTMVPAENLSNQHHLPHGGG----GGFYGCCGSSYTESFGLMSRVHGYDYHSEACLGSD- 60

Query: 61  PYLISPDPPMAEDDSTTNSLNHDQAPSN------RDDGWLQLSIGGSGSGGNVTGLKRDQ 120
             L++    MAED+S TNSLN +++ S       +D+GWLQL IGG  +       K DQ
Sbjct: 61  --LVANS--MAEDESRTNSLNEERSSSKDNNQEEKDEGWLQLGIGGQAT--RYDSSKHDQ 120

Query: 121 RESMTSERSSGLVELDLLPGSG----RDISMNYSRWVSDFSSPETTTTSKTETGAETGIG 180
            +   + R  GL+ELDLLPG      R ++  ++  + +F +P         T       
Sbjct: 121 GDP--TARRGGLIELDLLPGGSSQQARPLAPTFN--MPEFRAPRPPVMHSFSTS------ 180

Query: 181 LPLFFG--TSSSSNFVQQEINWAFRPVTGIGTGVPSSSSPSTSAVSSSYSLPMSGRRSSY 240
             LFF     SSS F Q EINWAFRP++      PSSSS S+S V      P+     S+
Sbjct: 181 --LFFQHQQGSSSTFPQGEINWAFRPISQNIAAAPSSSSSSSSLV------PLG----SH 240

Query: 241 LGRPLIQFQSLGVDMATATAGPSSDVRIINPPRRPHSGIWFTLKALENQGKEPFLPQISK 300
             RP  Q Q LG+D+A    GPSSDVRII+PPRRPHSGIWF L+A +NQ KEPFLPQI K
Sbjct: 241 FARPF-QVQ-LGMDVA----GPSSDVRIIDPPRRPHSGIWFMLQASQNQAKEPFLPQIPK 291

[Close]

BLAST of CSPI04G02490 vs. TrEMBL
Match: A0A067JUS7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23112 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43
Identity = 124/281 (44.13%), Postives = 160/281 (56.94%), Query Frame = 1


Query: 51  PMAEDDSTTNSLNHDQAPSN----------------RDDGWLQLSIGGSGSGGNVTGLKR 110
           PMAED+S TNSLN     S+                RD+GWLQLSIGG     +++   +
Sbjct: 64  PMAEDESRTNSLNEGAGSSSKDNNNTTTDNNNIQDDRDEGWLQLSIGGH----SISHESK 123

Query: 111 DQRESMTSERSSGLVELDLLPGS----GRDISMNYSRWVSDFSSPETTTTSKTETGAETG 170
              +  ++ R  GL+ELDLLPGS     R +S       ++F  P         +     
Sbjct: 124 QDHQVDSTARRGGLIELDLLPGSSSNQARPLSAPIFHVPAEFRIPSRPAIMSNSS----- 183

Query: 171 IGLPLFF--------GTSSSSNFVQQEINWAFRPVTGIGTGVPSSSSPSTSAVSSSYSLP 230
                FF        G+SS++    QEINWAFR +  I +   SS SP++ + SSS  +P
Sbjct: 184 -----FFQHQHQHQQGSSSTTYPHHQEINWAFRHMPHIAS---SSPSPNSQSSSSSLIVP 243

Query: 231 MSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPPRRPHSGIWFTLKALENQGKE 290
           M G   SY  RP   +   G+D+    AGPSSD R+I+PPRRPHSGIWF L+A +NQ +E
Sbjct: 244 MGG---SYFSRPFQVYS--GIDV----AGPSSDFRVIDPPRRPHSGIWFVLQASQNQAQE 303

Query: 291 PFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESEAVL 304
           PFLPQISK+YLRIKD +MTV L+MKYLVNKL LDSESE  +
Sbjct: 304 PFLPQISKSYLRIKDGRMTVRLLMKYLVNKLRLDSESEVFI 318

[Close]

BLAST of CSPI04G02490 vs. TrEMBL
Match: B9GMR4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13220g PE=4 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 9.7e-43
Identity = 134/293 (45.73%), Postives = 166/293 (56.66%), Query Frame = 1


Query: 38  LGSDNPYLISPDPPMAEDDSTTNSLNHDQAPSN------RDDGWLQLSIGG--------- 97
           LGSD   L+  + PMAED+S TNS+N++   S+      RD+GWLQLSIGG         
Sbjct: 53  LGSD---LVVANIPMAEDESRTNSVNNEAGSSSKDVQEERDEGWLQLSIGGQTTTTTTPT 112

Query: 98  SGSGGNVTGLKRDQRESMTSE---RSSGLVELDLLPGSGRDISMNYSRW------VSDFS 157
           S    +       Q++ +  +   R  GL+ELDLLPGS   IS            V DF 
Sbjct: 113 SHESKHYHHHHHHQQQQLVLDPTTRRGGLIELDLLPGSISSISHQARPLSTPMFHVPDFR 172

Query: 158 SPETTTTSKTETGAETGIGLPLFF----GTSSSSNFVQQEINWAFRPVTGIGTGVPSSSS 217
           +P     +   + A       LFF      +SS+  + QEINW FRP+        SS S
Sbjct: 173 TPPRPVMNIAASHATNFGTTSLFFQHHPAATSSTYPLHQEINWPFRPMLHNIATASSSYS 232

Query: 218 PSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPPRRPHSGI 277
           PS+S   SS  +P+     SY  RP   FQ   V+     AGPSSD R+I+PPRRPHSGI
Sbjct: 233 PSSS---SSSLMPLG----SYFSRP---FQ---VNSGMDVAGPSSDFRVIDPPRRPHSGI 292

Query: 278 WFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESEAV 303
           WF L+A +NQ KEPFLPQISK+YLRIKD +MTV L+MKYLVNKL LDSESE V
Sbjct: 293 WFLLQASQNQTKEPFLPQISKSYLRIKDGRMTVRLLMKYLVNKLGLDSESELV 329

[Close]

BLAST of CSPI04G02490 vs. TrEMBL
Match: B9RFX8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437950 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 131/289 (45.33%), Postives = 158/289 (54.67%), Query Frame = 1


Query: 51  PMAEDDSTTNSLNH-------------------DQAPSN--------RDDGWLQLSIGGS 110
           PMAED+S TNSLN                    +  P+N        RD+GWLQL IGG+
Sbjct: 68  PMAEDESRTNSLNEAAGSSSKDDDNNNNNTNNSNTTPNNNNNTREEERDEGWLQLGIGGN 127

Query: 111 GSGGNVTGLKRDQRESMTSERSS--GLVELDLLPGSGRDISMNYSRWVSD--FSSPETTT 170
                    K      +    ++  GL+ELDLLPG G   S +  R +S   F  P  + 
Sbjct: 128 TRTATHNQSKYQHHHVIDPSGATRGGLIELDLLPGGGSS-SSHQGRPLSAPIFHVPSRSP 187

Query: 171 TSKTETGAETGIGLPLFF------GTSSSSNFVQQEINWAFRPVTGIGTGVPSSSSPSTS 230
                 GA +     LFF      G+ SS     QEINWAFR +       PSSSS   S
Sbjct: 188 VMNIAAGAPS-FSTSLFFHQHQQPGSGSSIYPHHQEINWAFRHMPHNIAMAPSSSSSPNS 247

Query: 231 AVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSS-DVRIINPPRRPHSGIWFT 290
             SSS  +P+    SSY  RP     S GVD+A    GPSS D R+I+PPRRPHSGIWFT
Sbjct: 248 QSSSSSLMPLG---SSYFSRPFQVHSSGGVDVA----GPSSSDFRVIDPPRRPHSGIWFT 307

Query: 291 LKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESEA 302
           L+A +NQ +EPFLPQISK+YLRIKD +MTV L+MKYLVNKL LDSESE+
Sbjct: 308 LQASQNQAQEPFLPQISKSYLRIKDGRMTVRLLMKYLVNKLRLDSESES 347

[Close]

BLAST of CSPI04G02490 vs. TAIR10
Match: AT5G13250.1 (AT5G13250.1 RING finger protein)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 77/167 (46.11%), Postives = 99/167 (59.28%), Query Frame = 1


Query: 148 ETGIGLPL---FFGTSSSSNFVQQEINWAFRPVTGIGTG---------VPSSSSPSTSAV 207
           E  +GLPL   F     +   +   + +  RP   IG           VP + +  +S+ 
Sbjct: 166 EEEVGLPLSSLFHHQHQAGGMMINPLMFHTRPQDMIGPWAAAAFRTPFVPQNLTQPSSSS 225

Query: 208 SSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPPRRPHSGIWFTLKA 267
           S S  +P+ G+   Y GR   Q Q +G D     AGPSS +R+I+PPRRPHSGIWF L+A
Sbjct: 226 SGSLMMPLMGQ---YFGRSSFQPQLIGNDNPDGVAGPSSSLRVIDPPRRPHSGIWFLLQA 285

Query: 268 LENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESEAV 303
            +NQ  EPFLPQI K+YLRIKD KMTV L+MKYLVNKL L+ ES+ V
Sbjct: 286 SQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQV 329

[Close]

BLAST of CSPI04G02490 vs. TAIR10
Match: AT1G28080.1 (AT1G28080.1 RING finger protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 98/273 (35.90%), Postives = 132/273 (48.35%), Query Frame = 1


Query: 39  GSDNPYLISPDPPMAEDDSTTN------SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGL 98
           GS + Y IS  P   +DD T        S+N D    N+D  WL+L IG      N  G 
Sbjct: 48  GSTDYYNISSSP--VKDDGTAPKNDVVCSINVDD---NKDKSWLRLGIGPEE---NTDGS 107

Query: 99  KRDQRESMTSERSSGLVELDLLPGSGRDISMNYSRWVSDFSSPETTTTSKTETGAETGIG 158
            + QR    +             GSGR+ S+  S     FSS  T  +S  +      + 
Sbjct: 108 YKLQRCCSKN-------------GSGRENSLELSL----FSSSSTAVSSSIDHLPTQPLQ 167

Query: 159 LPLFFG---TSSSSNFVQQEINWAFRPVTGIGTGVPSSSSPSTSAVSSSYSLPMSGRRSS 218
           LP       T    + V    +   +P T +  G    S PS+      Y  P   R SS
Sbjct: 168 LPYHHDQLLTMRGPSLVYN--HQLMKPQTLLNRGF---SFPSSKPWIPQYMAPF--RPSS 227

Query: 219 YLGRPLIQFQSLGVDMAT--ATAGPSSDVRIINPPRRPHSGIWFTLKALENQGKEPFLPQ 278
              R +    SL          AGPSS+ R+++PPRRPHSG+WF L+A + Q +EPFLPQ
Sbjct: 228 LSDRDVTNNNSLSRSCCVDEGGAGPSSEFRVLDPPRRPHSGLWFLLQASQFQEREPFLPQ 287

Query: 279 ISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 301
           ++K+YLRIKD ++TV L++KYL+ KL LDSESE
Sbjct: 288 VNKSYLRIKDGRITVRLLIKYLMKKLELDSESE 288

[Close]

BLAST of CSPI04G02490 vs. TAIR10
Match: AT2G30580.1 (AT2G30580.1 DREB2A-interacting protein 2)

HSP 1 Score: 58.5 bits (140), Expect = 8.2e-09
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 1


Query: 244 RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 301
           R +  +WF+L A  NQ  E  LPQI  NYLRI+D  + VS + KYL+ KL L SE E
Sbjct: 305 RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDE 361

[Close]

BLAST of CSPI04G02490 vs. TAIR10
Match: AT1G06770.1 (AT1G06770.1 DREB2A-interacting protein 1)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-08
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 1


Query: 244 RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 301
           R +  +WF+L A  +Q     LPQI  N+LRI+D   TVS + KYL+ KL L+SE+E
Sbjct: 306 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENE 362

[Close]

BLAST of CSPI04G02490 vs. TAIR10
Match: AT3G23060.1 (AT3G23060.1 RING/U-box superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-08
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 1


Query: 186 SSSSPSTSAVSSSYSLPMSGRR---SSYLGRPLIQFQSLGVDMATATAGPSSDVRIINPP 245
           S     T+  ++S S    G++    SY  RP I  ++  V+ A  T  P + V +    
Sbjct: 297 SGQKLKTNGAATSRSRKKKGKKPVEKSYSLRPRIGRRT--VNPAAGTTTPEAPVSVEEEM 356

Query: 246 R----RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSE 305
           +    R ++ +WF+LK  + Q  E  LP I+   +R+KD  MTVS + KYL+ KL L+SE
Sbjct: 357 KVEEGRNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESE 416

[Close]

BLAST of CSPI04G02490 vs. NCBI nr
Match: gi|700197823|gb|KGN52981.1| (hypothetical protein Csa_4G008840 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 2.8e-168
Identity = 300/304 (98.68%), Postives = 301/304 (99.01%), Query Frame = 1


Query: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEDDSTTN 60
           MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAE DSTTN
Sbjct: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEGDSTTN 60

Query: 61  SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD 120
           SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD
Sbjct: 61  SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD 120

Query: 121 ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI 180
           ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI
Sbjct: 121 ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI 180

Query: 181 GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN 240
           GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN
Sbjct: 181 GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN 240

Query: 241 PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 300
           PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE
Sbjct: 241 PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 300

Query: 301 AVLY 305
             +Y
Sbjct: 301 VFIY 304

[Close]

BLAST of CSPI04G02490 vs. NCBI nr
Match: gi|778689783|ref|XP_004152316.2| (PREDICTED: uncharacterized protein LOC101223230 [Cucumis sativus])

HSP 1 Score: 597.4 bits (1539), Expect = 1.4e-167
Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 1


Query: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEDDSTTN 60
           MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAE DSTTN
Sbjct: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYYLGSDNPYLISPDPPMAEGDSTTN 60

Query: 61  SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD 120
           SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD
Sbjct: 61  SLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLPGSGRD 120

Query: 121 ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI 180
           ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI
Sbjct: 121 ISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFRPVTGI 180

Query: 181 GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN 240
           GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN
Sbjct: 181 GTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSDVRIIN 240

Query: 241 PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 300
           PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE
Sbjct: 241 PPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESE 300

[Close]

BLAST of CSPI04G02490 vs. NCBI nr
Match: gi|659108297|ref|XP_008454123.1| (PREDICTED: uncharacterized protein LOC103494623 isoform X1 [Cucumis melo])

HSP 1 Score: 557.8 bits (1436), Expect = 1.2e-155
Identity = 283/305 (92.79%), Postives = 286/305 (93.77%), Query Frame = 1


Query: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYY-----LGSDNPYLISPDPPMAED 60
           MTMVAALNHFSKH HGGADHLMNGGAPLCNQYYYYYY     LGS NPYLIS DPPMAED
Sbjct: 1   MTMVAALNHFSKHQHGGADHLMNGGAPLCNQYYYYYYYYYNYLGSSNPYLISLDPPMAED 60

Query: 61  DSTTNSLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLP 120
           DSTTNSLNHDQAPSN DDGWLQLSIGGSG  GNVTGLK D+RESMT  RSSGLVELDLLP
Sbjct: 61  DSTTNSLNHDQAPSNTDDGWLQLSIGGSGGSGNVTGLKHDERESMTPGRSSGLVELDLLP 120

Query: 121 GSGRDISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFR 180
           G GRDISMNYSRWVSDFSSPETTTTSKTETGAE GIGLPLFFGTSSSSNFVQQEINWAFR
Sbjct: 121 GGGRDISMNYSRWVSDFSSPETTTTSKTETGAEIGIGLPLFFGTSSSSNFVQQEINWAFR 180

Query: 181 PVTGIGTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSD 240
           PV GIGTGVPSSSSPSTSAVSSSYSLP+SGRRSSYLGRPLIQ QS+GVD ATATAGPSSD
Sbjct: 181 PVAGIGTGVPSSSSPSTSAVSSSYSLPISGRRSSYLGRPLIQLQSVGVDTATATAGPSSD 240

Query: 241 VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHL 300
           VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHL
Sbjct: 241 VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHL 300

[Close]

BLAST of CSPI04G02490 vs. NCBI nr
Match: gi|659108301|ref|XP_008454125.1| (PREDICTED: uncharacterized protein LOC103494623 isoform X3 [Cucumis melo])

HSP 1 Score: 510.8 bits (1314), Expect = 1.7e-141
Identity = 258/280 (92.14%), Postives = 261/280 (93.21%), Query Frame = 1


Query: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYY-----LGSDNPYLISPDPPMAED 60
           MTMVAALNHFSKH HGGADHLMNGGAPLCNQYYYYYY     LGS NPYLIS DPPMAED
Sbjct: 1   MTMVAALNHFSKHQHGGADHLMNGGAPLCNQYYYYYYYYYNYLGSSNPYLISLDPPMAED 60

Query: 61  DSTTNSLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLP 120
           DSTTNSLNHDQAPSN DDGWLQLSIGGSG  GNVTGLK D+RESMT  RSSGLVELDLLP
Sbjct: 61  DSTTNSLNHDQAPSNTDDGWLQLSIGGSGGSGNVTGLKHDERESMTPGRSSGLVELDLLP 120

Query: 121 GSGRDISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFR 180
           G GRDISMNYSRWVSDFSSPETTTTSKTETGAE GIGLPLFFGTSSSSNFVQQEINWAFR
Sbjct: 121 GGGRDISMNYSRWVSDFSSPETTTTSKTETGAEIGIGLPLFFGTSSSSNFVQQEINWAFR 180

Query: 181 PVTGIGTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSD 240
           PV GIGTGVPSSSSPSTSAVSSSYSLP+SGRRSSYLGRPLIQ QS+GVD ATATAGPSSD
Sbjct: 181 PVAGIGTGVPSSSSPSTSAVSSSYSLPISGRRSSYLGRPLIQLQSVGVDTATATAGPSSD 240

Query: 241 VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRI 276
           VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRI
Sbjct: 241 VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRI 280

[Close]

BLAST of CSPI04G02490 vs. NCBI nr
Match: gi|659108303|ref|XP_008454127.1| (PREDICTED: uncharacterized protein LOC103494623 isoform X4 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 5.5e-124
Identity = 230/252 (91.27%), Postives = 233/252 (92.46%), Query Frame = 1


Query: 1   MTMVAALNHFSKHHHGGADHLMNGGAPLCNQYYYYYY-----LGSDNPYLISPDPPMAED 60
           MTMVAALNHFSKH HGGADHLMNGGAPLCNQYYYYYY     LGS NPYLIS DPPMAED
Sbjct: 1   MTMVAALNHFSKHQHGGADHLMNGGAPLCNQYYYYYYYYYNYLGSSNPYLISLDPPMAED 60

Query: 61  DSTTNSLNHDQAPSNRDDGWLQLSIGGSGSGGNVTGLKRDQRESMTSERSSGLVELDLLP 120
           DSTTNSLNHDQAPSN DDGWLQLSIGGSG  GNVTGLK D+RESMT  RSSGLVELDLLP
Sbjct: 61  DSTTNSLNHDQAPSNTDDGWLQLSIGGSGGSGNVTGLKHDERESMTPGRSSGLVELDLLP 120

Query: 121 GSGRDISMNYSRWVSDFSSPETTTTSKTETGAETGIGLPLFFGTSSSSNFVQQEINWAFR 180
           G GRDISMNYSRWVSDFSSPETTTTSKTETGAE GIGLPLFFGTSSSSNFVQQEINWAFR
Sbjct: 121 GGGRDISMNYSRWVSDFSSPETTTTSKTETGAEIGIGLPLFFGTSSSSNFVQQEINWAFR 180

Query: 181 PVTGIGTGVPSSSSPSTSAVSSSYSLPMSGRRSSYLGRPLIQFQSLGVDMATATAGPSSD 240
           PV GIGTGVPSSSSPSTSAVSSSYSLP+SGRRSSYLGRPLIQ QS+GVD ATATAGPSSD
Sbjct: 181 PVAGIGTGVPSSSSPSTSAVSSSYSLPISGRRSSYLGRPLIQLQSVGVDTATATAGPSSD 240

Query: 241 VRIINPPRRPHS 248
           VRIINPPRRPHS
Sbjct: 241 VRIINPPRRPHS 252

The following BLAST results are available for this feature:

BLAST of CSPI04G02490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRIP2_ARATH	1.4e-07	50.88	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1	[more]
DRIP1_ARATH	1.2e-06	47.37	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2	[more]
DRIPH_ARATH	1.2e-06	32.28	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana GN=At3g23060 ...	[more]

BLAST of CSPI04G02490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYQ8_CUCSA	1.9e-168	98.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G008840 PE=4 SV=1	[more]
A0A061E508_THECC	4.2e-46	45.45	RING finger protein, putative OS=Theobroma cacao GN=TCM_008415 PE=4 SV=1	[more]
A0A067JUS7_JATCU	2.5e-43	44.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23112 PE=4 SV=1	[more]
B9GMR4_POPTR	9.7e-43	45.73	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13220g PE=4 SV=2	[more]
B9RFX8_RICCO	1.8e-41	45.33	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437950 PE=4 SV=1	[more]

BLAST of CSPI04G02490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13250.1	1.1e-29	46.11	RING finger protein	[more]
AT1G28080.1	2.4e-24	35.90	RING finger protein	[more]
AT2G30580.1	8.2e-09	50.88	DREB2A-interacting protein 2	[more]
AT1G06770.1	6.9e-08	47.37	DREB2A-interacting protein 1	[more]
AT3G23060.1	6.9e-08	32.28	RING/U-box superfamily protein	[more]

BLAST of CSPI04G02490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700197823\|gb\|KGN52981.1\|	2.8e-168	98.68	hypothetical protein Csa_4G008840 [Cucumis sativus]	[more]
gi\|778689783\|ref\|XP_004152316.2\|	1.4e-167	99.67	PREDICTED: uncharacterized protein LOC101223230 [Cucumis sativus]	[more]
gi\|659108297\|ref\|XP_008454123.1\|	1.2e-155	92.79	PREDICTED: uncharacterized protein LOC103494623 isoform X1 [Cucumis melo]	[more]
gi\|659108301\|ref\|XP_008454125.1\|	1.7e-141	92.14	PREDICTED: uncharacterized protein LOC103494623 isoform X3 [Cucumis melo]	[more]
gi\|659108303\|ref\|XP_008454127.1\|	5.5e-124	91.27	PREDICTED: uncharacterized protein LOC103494623 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G02490.1	CSPI04G02490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10825	RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT	coord: 65..300 score: 1.2
None	No IPR available	PANTHER	PTHR10825:SF23	RING FINGER PROTEIN	coord: 65..300 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G02490	Cla012787	Watermelon (97103) v1	cpiwmB307
CSPI04G02490	Csa4G008840	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G02490	MELO3C017803	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G02490	ClCG07G011810	Watermelon (Charleston Gray)	cpiwcgB343
CSPI04G02490	Lsi07G003740	Bottle gourd (USVL1VR-Ls)	cpilsiB311
CSPI04G02490	MELO3C017803.2	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G02490	CsaV3_4G002390	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G02490	Cla97C07G138520	Watermelon (97103) v2	cpiwmbB333
CSPI04G02490	Bhi01G002902	Wax gourd	cpiwgoB381
CSPI04G02490	Cucsa.095630	Cucumber (Gy14) v1	cgycpiB103
CSPI04G02490	CmaCh06G017090	Cucurbita maxima (Rimu)	cmacpiB850
CSPI04G02490	CmaCh14G014060	Cucurbita maxima (Rimu)	cmacpiB263
CSPI04G02490	CmoCh14G014430	Cucurbita moschata (Rifu)	cmocpiB250
CSPI04G02490	CmoCh06G017010	Cucurbita moschata (Rifu)	cmocpiB833
CSPI04G02490	Cp4.1LG08g06320	Cucurbita pepo (Zucchini)	cpecpiB871
CSPI04G02490	Cp4.1LG03g13190	Cucurbita pepo (Zucchini)	cpecpiB617
CSPI04G02490	CsGy4G002360	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G02490	Carg15427	Silver-seed gourd	carcpiB0730
CSPI04G02490	Carg06559	Silver-seed gourd	carcpiB0133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None