CSPI04G01930 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCAACAACATCAGTTTTTTAAATCTAACCCTAAAAATTTGAAAGGTTAAAATTCAGCTTAATTCTAATTTTATTTAGGACCAGATTTACAATTTAAACAGATTTTTTTTTTTTTTTCCTCTAGAATTCAGATCATTTCATGCAAGCAAAAGCAGCTAAGGGCGCAGTTCTCAGCTCCAGATCGGGCAGCTTTCTCTTCTTTTGATCCGATTCTGTTTGGGTTCTTGAAATTTTTTATGGTCAATCAACAAACAACTCCGCAGAATTCAATTAATTCGTCCGCTTAGTTTGATAAGTTTTTTGATCTTCAGCGACTCCTACAGTTTGTTTTGATTTCTCCCTTCTCTACTATAATAGTAAATTCTCTGCAATCTACCTACATTTTGCCTCTTCTTCGAGGTGAGAAGGTAGATTTTGATTTGCGCGTGTATTGAATCTCAGCAACAAACAATGGGAAACTCCTCTTCGATGCTCACTCAATATGATATTGAAGAAGTTCAATGCCACTGCGATAATCTATGTGAGATTTTTTGTTTTTTTCGATTTATGTTCCTTATCCTTTCTTTCCATACTCTTCACTTCTAATTTAACTCGGTTCTCTTTCAATTTGGTTGTATAATTCAGTTACGCAACAAGAAATAGTGTCACTGTATCAAAGATTTTGTCAACTCGATCGAAACTCAAAGGGATACATCTTGGCCGATGAGTTTTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGGTTTTCTTTTGAAACATTTCTATGATTGTTTTCTTGAAATTGCGTGTACTTTAATCGGTGAATGATAGTTTGTCCTTTCCTTTTTGTGTTCCCCAGAGGCTGCTAAAGATGGTTGATGGTTTGAACTTTAAGGATTTCGTGGCGTTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATGTACGTATAAAATGCGTACTTGCTATTGTTTAGATGCTGTCTGATGATACTCGACATTTGATTTCTTTGACAGTATTCCAAATATTGCCTTTGAAGTTTGGAGCAAATTTTTGGTTTATATTTTTCACTTTTCATACTTAATTGTACAGAAATGCTATGGAATAATGCACTTTTCAGTTTCCATTTAAGACGTCTTTTCCCCAGAAATATTACATGATCTGCTCATTGAAATATAGAAACAAATGGCGGTATACTTATGTTCTTGAATTTGATGGTATTGGGAATTTATGAGGTTGATATGGACAAAAGAACCTCCACCTATCTTTACATTGATAAGATATTGCCCACTTTGGACATAAGCATTTATAGCTTTGCTTTTGATTTCACCCAGAAGGTTATATTGGTGGAGATGATTGTCCATACTTATGTACACTAGATCTCTCCCTTTCCTAAACAACGAAGGACTTTGTTTACGCTCCTAGCAATTACTATCCAATATGTTTGTAGTTTTCTTCTAGAATTATAGATGGTGAGAAAAGGTTATATCAAATGGGCTTCTATAATGAGTCCTCAAAATCAACTTGTTGTAATTGGCTCCATAGGACCTTCATAGATAGTGTAATTTGGTATTTTTAGTTGGTTGATGTACAAAAATCGTAAGAGTTATCTGCATGATTTTGGGTAGCCGTTCTAATAATTTTTTTAAATAGTGTGAGTATTGGGTTAAAATGTATATGAGTATATCTTAATGAACTTTCTTAGTCAAATAACATTCTTCATTTATTGTGAGAGGGGTTGAATTCAGTGGTTAAATTTCTTTCTACCTATCAGAAACATGGCACTGTGTATCTCCTCTTTTCTTTTCTTGTCAATCGTTTTCTTTAGCCACTAACATCATACTCTTTTAACTAAAAATTTGATTATCTAAAATTTTAATAAATGATATACTGATATAATGAGCTTTGTTGTCTTGAAAAAGCTTGACTCATCAGTTATTATTTGTTTTTGGTTCCATCAGTTATGTTCAAAGTTTATGATGCCGACTTGAATGGGAAGGTGTCCTTCAATGACATGATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGGTACTCTAGACGATACATTAAATCTTATGAGGCATTGAGAGAATTGTATATATTTTCCATGGCACATGGCATGTTATAAAGTTACGTTCATTTCTTTCTTTTGCAGCAAGTCTTGAGCCAACTTCTGGAGGAAGCAGGTTACACAAAGGAAGTCCATTTAACCCAGGATGATTTCGTTAAGGTTTGTTTTTACCATGTTAAATCTCATTCCGTTCATTTGTACCAACAAGACCTAGTGGGCCAGTGACTTCCTAATCTGACACGCATACAAGCACAAAAATAATTAATAAAATTATTTGAAACTTGGATCAATTAAATGGAGAAAGTACATTAATAGTCTAAATTACCCAAATATTACCACAAAGATAAAGCAGCTGAAATCTCAAGGACAATTTGTGATCAATAAATAGTCTAGTCATTAACGTTAACAATCATATTTGAAATCTTAAGAAAATTTATACCTCTATCAATAACAGTACCTCGTTGTTGAACTTTAAACTTCAATTTTGAAATTGTTTTTGATTTAAACTTTACTGATTCTTCAGCATCTGAATGAAAAGGGTTCCACCAATCATGGTTTATTTGCTTATTCTATACACTTCAGAACTACTTCATTATTCATCACTTGGTGTCTTGCACCATGTCAACTTTTCCATGATTTTTCCTAGAAGTCATCTAGTTCAATTTTGTGATCCCGTGCTAACTATTATTGTACTGACTTTTGTCATCTGAGTTTGCTGTAAGTCATTCATAATTTTCTCAATTCATATATTCCCCAAGCTGTTGTAATGTGTATTTTTGTTCTTTCGCAGATTCTTGCCAATTCTGACCTGAAAATGGAGGTTGAGGTGCCTGTTGATTAAGACGACTACTCAAACTATTCCTTTGTCCCCTCCCTTTTCCTCTTTCGCGACAAGGAGAAACAAATGATAAATTACTAGCTAAAGCGTCATCGTCATGTATCATGTCTTCGTCATCCTCATGTATCATGTCCTTCTCAAGCAATTTCAGCGTCGATGAGCAAGATCAATTCTTCAAACATGTTCATTTATGCTCAATTCAAGCCTATGGCTCACCCTTTTGTAGACAGATATTGATTTCAAAGATTACGAACCATCTTAATGAAAATCTCTCTGAAACGAATTATTTCTG ATGGGAAACTCCTCTTCGATGCTCACTCAATATGATATTGAAGAAGTTCAATGCCACTGCGATAATCTATTTACGCAACAAGAAATAGTGTCACTGTATCAAAGATTTTGTCAACTCGATCGAAACTCAAAGGGATACATCTTGGCCGATGAGTTTTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGAGGCTGCTAAAGATGGTTGATGGTTTGAACTTTAAGGATTTCGTGGCGTTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATTTATGTTCAAAGTTTATGATGCCGACTTGAATGGGAAGGTGTCCTTCAATGACATGATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGCAAGTCTTGAGCCAACTTCTGGAGGAAGCAGGTTACACAAAGGAAGTCCATTTAACCCAGGATGATTTCGTTAAGATTCTTGCCAATTCTGACCTGAAAATGGAGGTTGAGGTGCCTGTTGATTAA ATGGGAAACTCCTCTTCGATGCTCACTCAATATGATATTGAAGAAGTTCAATGCCACTGCGATAATCTATTTACGCAACAAGAAATAGTGTCACTGTATCAAAGATTTTGTCAACTCGATCGAAACTCAAAGGGATACATCTTGGCCGATGAGTTTTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGAGGCTGCTAAAGATGGTTGATGGTTTGAACTTTAAGGATTTCGTGGCGTTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATTTATGTTCAAAGTTTATGATGCCGACTTGAATGGGAAGGTGTCCTTCAATGACATGATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGCAAGTCTTGAGCCAACTTCTGGAGGAAGCAGGTTACACAAAGGAAGTCCATTTAACCCAGGATGATTTCGTTAAGATTCTTGCCAATTCTGACCTGAAAATGGAGGTTGAGGTGCCTGTTGATTAA
BLAST of CSPI04G01930 vs. Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-28 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CSPI04G01930 vs. Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23 Identity = 53/170 (31.18%), Postives = 107/170 (62.94%), Query Frame = 1
BLAST of CSPI04G01930 vs. Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cnb-1 PE=2 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-22 Identity = 56/175 (32.00%), Postives = 110/175 (62.86%), Query Frame = 1
BLAST of CSPI04G01930 vs. Swiss-Prot
Match: CANB_CRYNB (Calcineurin subunit B OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNB1 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.2e-20 Identity = 51/148 (34.46%), Postives = 92/148 (62.16%), Query Frame = 1
BLAST of CSPI04G01930 vs. Swiss-Prot
Match: CANB_CRYNJ (Calcineurin subunit B OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNB1 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.2e-20 Identity = 51/148 (34.46%), Postives = 92/148 (62.16%), Query Frame = 1
BLAST of CSPI04G01930 vs. TrEMBL
Match: A0A0A0KTI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006370 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 1.3e-92 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of CSPI04G01930 vs. TrEMBL
Match: Q7FZ95_EUCGR (Calcineurin-like protein OS=Eucalyptus grandis GN=EgCBL1 PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76 Identity = 145/175 (82.86%), Postives = 164/175 (93.71%), Query Frame = 1
BLAST of CSPI04G01930 vs. TrEMBL
Match: Q93VF2_EUCCA (Calcineurin-like protein OS=Eucalyptus camaldulensis GN=EcCBL1 PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76 Identity = 145/175 (82.86%), Postives = 164/175 (93.71%), Query Frame = 1
BLAST of CSPI04G01930 vs. TrEMBL
Match: A0A059BYK8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03918 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76 Identity = 145/175 (82.86%), Postives = 164/175 (93.71%), Query Frame = 1
BLAST of CSPI04G01930 vs. TrEMBL
Match: A0A0A0KBS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432270 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 3.8e-76 Identity = 144/175 (82.29%), Postives = 162/175 (92.57%), Query Frame = 1
BLAST of CSPI04G01930 vs. TAIR10
Match: AT3G18430.1 (AT3G18430.1 Calcium-binding EF-hand family protein) HSP 1 Score: 272.7 bits (696), Expect = 1.6e-73 Identity = 132/175 (75.43%), Postives = 159/175 (90.86%), Query Frame = 1
BLAST of CSPI04G01930 vs. TAIR10
Match: AT3G51920.1 (AT3G51920.1 calmodulin 9) HSP 1 Score: 55.5 bits (132), Expect = 4.0e-08 Identity = 31/132 (23.48%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of CSPI04G01930 vs. TAIR10
Match: AT5G47100.1 (AT5G47100.1 calcineurin B-like protein 9) HSP 1 Score: 49.7 bits (117), Expect = 2.2e-06 Identity = 39/176 (22.16%), Postives = 83/176 (47.16%), Query Frame = 1
BLAST of CSPI04G01930 vs. TAIR10
Match: AT4G16350.1 (AT4G16350.1 calcineurin B-like protein 6) HSP 1 Score: 48.9 bits (115), Expect = 3.7e-06 Identity = 42/134 (31.34%), Postives = 68/134 (50.75%), Query Frame = 1
BLAST of CSPI04G01930 vs. NCBI nr
Match: gi|449468944|ref|XP_004152181.1| (PREDICTED: calcineurin subunit B-like [Cucumis sativus]) HSP 1 Score: 347.1 bits (889), Expect = 1.9e-92 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of CSPI04G01930 vs. NCBI nr
Match: gi|659108419|ref|XP_008454189.1| (PREDICTED: calcineurin subunit B-like [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 2.1e-91 Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 1
BLAST of CSPI04G01930 vs. NCBI nr
Match: gi|629105281|gb|KCW70750.1| (hypothetical protein EUGRSUZ_F03918 [Eucalyptus grandis]) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 145/175 (82.86%), Postives = 164/175 (93.71%), Query Frame = 1
BLAST of CSPI04G01930 vs. NCBI nr
Match: gi|706715452|ref|NP_001289640.1| (calcineurin subunit B [Eucalyptus grandis]) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 145/175 (82.86%), Postives = 164/175 (93.71%), Query Frame = 1
BLAST of CSPI04G01930 vs. NCBI nr
Match: gi|449436166|ref|XP_004135865.1| (PREDICTED: calcineurin subunit B [Cucumis sativus]) HSP 1 Score: 292.4 bits (747), Expect = 5.5e-76 Identity = 144/175 (82.29%), Postives = 162/175 (92.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |