CSPI04G00600 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G00600
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 305951 .. 306409 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGCAGAAGTTATATTAAAGAAGAAAAGAAAAAAGGCAAACCTGCCTTTTTCCTTGGCTATAAATATGGAGGCCAAAGATGTTTATTTACTCTACTTTCTCTCTTCTTCTTTTTGCATACATAGAGAATATGAAGGTTCAACATGAAAAAAGTAGTGATTCATCAAGTAGAACAGTTGGAGAGAAACTTGCTCAAGCTTATCGGGATGTCAAGGTTGCCCTAACAAAAAACCAAGGCGTTGGAACGAGACGTAACCAAAGGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCATGGAGTCATACTTGAACTAGTTACTACCGTTTGTTTGATTAAACAAACTATTTCTTAAAAAACTTTCTTAACAACTGTATCGTTAAATGATCGTTCATTGTAAAAGTTAGTATATTGTTTTACAATAATAAACTATGACTTTGAAAGGTTTTCATAAGATT

mRNA sequence

ATGTTTATTTACTCTACTTTCTCTCTTCTTCTTTTTGCATACATAGAGAATATGAAGGTTCAACATGAAAAAAGTAGTGATTCATCAAGTAGAACAGTTGGAGAGAAACTTGCTCAAGCTTATCGGGATGTCAAGGTTGCCCTAACAAAAAACCAAGGCGTTGGAACGAGACGTAACCAAAGGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCATGGAGTCATACTTGA

Coding sequence (CDS)

ATGTTTATTTACTCTACTTTCTCTCTTCTTCTTTTTGCATACATAGAGAATATGAAGGTTCAACATGAAAAAAGTAGTGATTCATCAAGTAGAACAGTTGGAGAGAAACTTGCTCAAGCTTATCGGGATGTCAAGGTTGCCCTAACAAAAAACCAAGGCGTTGGAACGAGACGTAACCAAAGGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCATGGAGTCATACTTGA
Homology
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BLAST of CSPI04G00600 vs. TrEMBL
Match: A0A0A0KY58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001535 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 18 MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT 77
          MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
Sbjct: 1  MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT 60

[Close]
BLAST of CSPI04G00600 vs. NCBI nr
Match: gi|700197628|gb|KGN52786.1| (hypothetical protein Csa_4G001535 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 18 MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT 77
          MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
Sbjct: 1  MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT 60

The following BLAST results are available for this feature:
BLAST of CSPI04G00600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G00600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY58_CUCSA1.8e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001535 PE=4 SV=1[more]
BLAST of CSPI04G00600 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G00600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197628|gb|KGN52786.1|2.5e-25100.00hypothetical protein Csa_4G001535 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009396 folic acid-containing compound biosynthetic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function
molecular_function GO:0004477 methenyltetrahydrofolate cyclohydrolase activity
molecular_function GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G00600.1CSPI04G00600.1mRNA