CSPI03G40460 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATGAATGAATCAATACAATCTCTCTCTCTCTCTCTTTCTCCCTATATTTTCTCTCTCTCTCTCTCTCAATTCTATATATAATTTAGTTTTGAAATTATGAGAAGGAAGCAAGTAATAGAGATACTGTTGTTTGTAGTAATGTTGCTGAACTGTGTTCTCTTAGTACACAATCTTGTAATAACCCTTTCTCCTAACTCCATTTTTATTTTATTTGATTTCTTACTACCAATAATTATATATTTAGGGGTTTTTCTTTCTTTTTTTGTACATATATATATATGAATTCTGTTGGTTTGGTTCATTGTGTTTTATAGGCCATTAGTGAGGCTCCAACACCACAGCCACAGACCAGTTCCAATTATTCCAATCCCATGGTATTTTTCTACATTGTAATATATGGTGAATCCATCCATTAATTGTCTTTTGTATATACAAAAAGTTGGAAATTAATGTATGTAACTTCCTTTTCCCATTTTTTTCCAAATTTCAGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGGTAAAAACTAAAAACTAATAATGAAAGGATTTTTCATGTGGTCAATTATTTTAAACTAAGTATTTATGCAGAATGTGGGGCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGCTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTACGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAGAGAGGAGGCCCCAAATGCCCTTAATTACTTTCATTTCCCAACTCCCTACAAAAAAAAAGCCATCATTAAGTTACTTTCTAATCTCATTTTCTGAACGTCCCTATTTTTTCGTTATACTTCTAAAAAGTGATGGTTTTGACCTTTCATGGAGGGTGACTTCTTAAAAGTATATATTATATGGAAGGGTTATTGTTGTTGTCTACACCTTCATCATATATGATACCGAACTCAACTAACACTAATTCTAGTAAAAATAGGATAGATT ATGAGAAGGAAGCAAGTAATAGAGATACTGTTGTTTGTAGTAATGTTGCTGAACTGTGTTCTCTTAGTACACAATCTTGCCATTAGTGAGGCTCCAACACCACAGCCACAGACCAGTTCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGGCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGCTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTACGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAGAGAGGAGGCCCCAAATGCCCTTAA ATGAGAAGGAAGCAAGTAATAGAGATACTGTTGTTTGTAGTAATGTTGCTGAACTGTGTTCTCTTAGTACACAATCTTGCCATTAGTGAGGCTCCAACACCACAGCCACAGACCAGTTCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGGCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGCTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTACGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAGAGAGGAGGCCCCAAATGCCCTTAA
BLAST of CSPI03G40460 vs. Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.8e-33 Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 1
BLAST of CSPI03G40460 vs. Swiss-Prot
Match: GASA6_ARATH (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.3e-28 Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 1
BLAST of CSPI03G40460 vs. Swiss-Prot
Match: GASA5_ARATH (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-26 Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 1
BLAST of CSPI03G40460 vs. Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.7e-26 Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 1
BLAST of CSPI03G40460 vs. Swiss-Prot
Match: GASAD_ARATH (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.0e-25 Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = 1
BLAST of CSPI03G40460 vs. TrEMBL
Match: A0A0A0LI43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G841990 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 2.0e-57 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI03G40460 vs. TrEMBL
Match: B9H9G0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04300g PE=4 SV=2) HSP 1 Score: 182.2 bits (461), Expect = 3.7e-43 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 1
BLAST of CSPI03G40460 vs. TrEMBL
Match: A5AI86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05860 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.7e-40 Identity = 85/117 (72.65%), Postives = 94/117 (80.34%), Query Frame = 1
BLAST of CSPI03G40460 vs. TrEMBL
Match: M5XG21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023616mg PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-37 Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 1
BLAST of CSPI03G40460 vs. TrEMBL
Match: A0A067JQK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22457 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.0e-37 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 1
BLAST of CSPI03G40460 vs. TAIR10
Match: AT1G74670.1 (AT1G74670.1 Gibberellin-regulated family protein) HSP 1 Score: 124.4 bits (311), Expect = 4.7e-29 Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 1
BLAST of CSPI03G40460 vs. TAIR10
Match: AT3G02885.1 (AT3G02885.1 GAST1 protein homolog 5) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-27 Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 1
BLAST of CSPI03G40460 vs. TAIR10
Match: AT3G10185.1 (AT3G10185.1 Gibberellin-regulated family protein) HSP 1 Score: 117.5 bits (293), Expect = 5.7e-27 Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = 1
BLAST of CSPI03G40460 vs. TAIR10
Match: AT2G30810.1 (AT2G30810.1 Gibberellin-regulated family protein) HSP 1 Score: 113.6 bits (283), Expect = 8.2e-26 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1
BLAST of CSPI03G40460 vs. TAIR10
Match: AT5G15230.1 (AT5G15230.1 GAST1 protein homolog 4) HSP 1 Score: 101.3 bits (251), Expect = 4.2e-22 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of CSPI03G40460 vs. NCBI nr
Match: gi|778685971|ref|XP_011652310.1| (PREDICTED: protein GAST1 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 4.6e-63 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 1
BLAST of CSPI03G40460 vs. NCBI nr
Match: gi|659129996|ref|XP_008464949.1| (PREDICTED: protein GAST1-like [Cucumis melo]) HSP 1 Score: 241.5 bits (615), Expect = 7.4e-61 Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 1
BLAST of CSPI03G40460 vs. NCBI nr
Match: gi|700204593|gb|KGN59726.1| (hypothetical protein Csa_3G841990 [Cucumis sativus]) HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI03G40460 vs. NCBI nr
Match: gi|743844820|ref|XP_011027306.1| (PREDICTED: protein GAST1-like [Populus euphratica]) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43 Identity = 86/118 (72.88%), Postives = 100/118 (84.75%), Query Frame = 1
BLAST of CSPI03G40460 vs. NCBI nr
Match: gi|566174416|ref|XP_002308912.2| (hypothetical protein POPTR_0006s04300g [Populus trichocarpa]) HSP 1 Score: 182.2 bits (461), Expect = 5.3e-43 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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