CSPI03G34600 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G34600
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 30392876 .. 30393046 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG

mRNA sequence

ATGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG

Coding sequence (CDS)

ATGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG
Homology
[Close]
BLAST of CSPI03G34600 vs. TrEMBL
Match: A0A0A0LBC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769640 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.6e-22
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK 57
          +NYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK
Sbjct: 8  LNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK 63

[Close]
BLAST of CSPI03G34600 vs. NCBI nr
Match: gi|700203965|gb|KGN59098.1| (hypothetical protein Csa_3G769640 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 9.5e-22
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK 57
          +NYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK
Sbjct: 8  LNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK 63

The following BLAST results are available for this feature:
BLAST of CSPI03G34600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G34600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBC4_CUCSA6.6e-2298.21Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769640 PE=4 SV=1[more]
BLAST of CSPI03G34600 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G34600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203965|gb|KGN59098.1|9.5e-2298.21hypothetical protein Csa_3G769640 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G34600.1CSPI03G34600.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G34600Csa3G769640Cucumber (Chinese Long) v2cpicuB120
CSPI03G34600CsaV3_7G018580Cucumber (Chinese Long) v3cpicucB196
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G34600Melon (DHL92) v3.6.1cpimedB178
CSPI03G34600Cucumber (Gy14) v2cgybcpiB318
CSPI03G34600Silver-seed gourdcarcpiB0917
CSPI03G34600Silver-seed gourdcarcpiB0940
CSPI03G34600Watermelon (97103) v2cpiwmbB263
CSPI03G34600Wax gourdcpiwgoB346
CSPI03G34600Cucumber (Gy14) v1cgycpiB423
CSPI03G34600Cucurbita maxima (Rimu)cmacpiB016
CSPI03G34600Cucurbita maxima (Rimu)cmacpiB462
CSPI03G34600Cucurbita moschata (Rifu)cmocpiB007
CSPI03G34600Cucurbita moschata (Rifu)cmocpiB450
CSPI03G34600Melon (DHL92) v3.5.1cpimeB183
CSPI03G34600Watermelon (Charleston Gray)cpiwcgB181
CSPI03G34600Watermelon (97103) v1cpiwmB186
CSPI03G34600Cucurbita pepo (Zucchini)cpecpiB553
CSPI03G34600Cucurbita pepo (Zucchini)cpecpiB780
CSPI03G34600Bottle gourd (USVL1VR-Ls)cpilsiB179