CSPI03G19280 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G19280
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionATP-dependent RNA helicase, putative
LocationChr3 : 15075712 .. 15084035 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATTATTTGTTTCTATTGGGATCTCTGGCTCCGTGTGCAATGGCTCCAAGGAAGAAGCAACAGCAGCAACCCAAGCAGAAGCAAAACAACCGAAAATCCAATTCCACTCCCTCCACCTCCGATGCTCGTCCTTCTTCCTCCGGTCCAAAGCTCAATATCTCCGCCGAAAACGAGACTCGTCTCCGTCGTCTCCTTCTGAGCTCCGGCCGCTCCACTCCATCGGTCACTCCCGCAGATGATTCGCTCTCAAAGGTCCAGAAGGTCAAGAAGCTTAAAGCCGTTTACGAGAAGCTCTCATGCGAAGGTTTTACCAATGATCAAATTGAACTGGCACTCTCCGCTATCGGGGTAACTTGCTTTTCAATGTTCTTTTTTTTTTTTAAATTTTTTTTGTTAAAAGTAACATTTTAGTGTTTTAGACTTGTAATTACTATTTCTTTAGTTTTCTAGACGGTTTCAATCTGATTAATTAGGTTCCTGATTAAAGTAACATCATGTTGGGTTAGAAAATTGAAGAATAATGCAGAACGAAGGAAGCGTTGATGGATTGTTTTACCAATTGGTTATTTTGTTTAACGAATTTTAGAATTGGAATGAAATGGAATTATGCCTGGATGGAATTTTTTTTTATTGGCATTTTGGCAAAAGCACTTGTGTTTTCTTTATCCATTTTTGTGGAATAGGTTGGATAACCGAGCCGATGACTTGTATGGTCTCCTTGCAATTGCATGTTCTTCATTGATTTTACGTTGTTAACTCAAAGTTACAATCAACAAATAATTTAAGTACGCCTTAATTGAGTTTATCAAACATAGCATGATATTTTAGCATGTTATTAGGTTCTTTCAATGCGAGAGACTTATAGGATCATTCTCTTTTCCTTTATATTCCGTTGGCTGCAAGCTGAATGATGCTTATTTGTTTAGATTCTGTAGGTAGGAGATTCATGGAGTAAAAGAGCATAAACATAAATGGTGGATATTCTAGGGACATCTCTGACTAGCATAAAATAAGAATTACTTTGTATTATGACCTTATTTGAATTGCTTCTGTTTTATAGATTGTACAACTGTGTCCTTGAGTTCTAAGAATTACTTTGTATTGGAATTTTCCTCGTCCCTTAGGGGTTGATAAAGTTTGAACTCTTTTCTCTAGTGTTAAGGCTTTGAGTGTCCTATAAGACTTGAAATTAAATCTAATCTCTTTTGTAACTCGGCCCAACATCTTTATGTGCCAATTGAAAACTTTCTATCTGAAACCTTTGACTAAAATAAATTCTATGTGCTGCCAGTTTTCTGAAATTGTTTTGTTTTAGTATTCATTTACTATATTCAGTTTTTATTTGACATCTAATTGTAACTGTTTTGATAGCTTGATATTGATTATGCTCTCGGTTCTGTTCCTGAAAAATTTAGAGTTCCTTAACTTTATCCTTGACCATACATATCTCAACAAATGGCATAATTTTCTTGTCTCGAGTAGGATGGTGCTACATTTGAAGCTGCTCTTGATTGGTTATGCTTGAACTTGCCTAGTAGCGAGCTTCCATTGAAATTTTCAAGCGGAACTTCTTTGCATACACATGTAGGTATGTTATGTTTTATATATTGGTATTGTTGAATGGTGTCTGTTTACATTTTCAAGTTTATTTACATACAGTTAATGCAAACAATTTACGATGCTTGATGCTATTGTCCTGCAATATTATTTTCAGGTGGTTCTGTTCGTATACTACAGACTGCACAAAAAGACTGTCCTTCAATGGGAGTCCAATCTTCCAAAGATGAAGATGGAGACAAAGAAGTTCCTATTATATTGAGTAGGGGTAAAGATGATGATAAGCTAGATCAGTTCCAATCATCCCAAGCTGAATGGATCAAACAGTATGTAGAGCAGCAAGAAGAGGTGCGACAAGAAGTTTCATTAATGCTTACGACTCTACTATTTGCAGCTCAAATTTATTGATCTGATGCCGTTAATACCAAAGAAATATTTTTGCTAACTACTCTGTCACCTTTTCCTCCACTGGTTTGTAGTTTCTTTGCCGATTATATAGGAGAGTTGGTGACTTCAGTTCCATAAGCCTCCGTACGGACTATACAAAACTGTGGCCAGAATTTTCTTTAAGGGTTTGAAGAGAGTCCTCCCTTTCACTATTTATACGGATCAATTGGCTTTTTAGGATCAATTGTATTTTTAAAGGTAATTACACAAAGCTGTATCAACAAACACCTATATAGAAGAGGATTAGACCTCACTCATTAGTCATTCCCACACCTCCTTCAAAGAACTCTCAAACCCTTTAAAAATGCTACTACTCTTTAGTCAAACCCCCCATAGAATAGAGAGAAAAATTCTACCACAATGCTCTACGCACTATCTAGTTCATAAGGATTTTCATAATCATTGAGTGATAGTTTTTGTTATGCATCAGAGTGATGCAAACAAGCCAAAACATTGATTCCAAAGGGAACAAGTGAACTGCTAGCTCCACATCAAATGATCTAGATCTTCTTCATTTATAGTATGCATGGAAATATAGGAGCTCGTCTTATGTCATTGATTGTAATTTTACCATTCTTAGTTTAGAGCTTCCATGTATGCCTGTATATGTTGAACTCTAATGCATGGAATGGGTTCTAAAAAAAGTTAGTCCTTCTCTGTTCCATTTGTTTTAGAAGCCATAACACGGATGGTATGATCCAAAATAAGTTTTGAGATTGCGCGCTATCCCCAACTGGTTGTAGATTGTGTTTGAGAGAGATAGAAGACTCAGACCACTTGTTTCTTCACTCCTATTTTGCTTATAAGGACTGGAATTTTATTTTTAAGAAGTTGGATTTGGTGTTGTTTCTCCCCCAAGGACTTACAGACTAAATGGAACAACACATCTTTTGTGGCACTTACAGACTAAATGGAACAACACATCTTTTCAATATACCTCCTCAATTTGATTTCTTTTGTAATTTTACAAAGTTTTTGGTGGGCCTTTACGCTCCTAAATTCTTGTAACTATAACATCTTAGGGTGTGTTTGCCCAAGGATTTTGGAAGTAGAAGTAGGAAAGTATGGAGTTACTCTTTGTTTGGCCCAAGGAGTTCGTGGGTCCCACTACTAAAAAACATCAATTTTATACCTTATCAACTCTTTACACTGTAGGCCCTGGGAGTTCACAACTTCCTAGACTTTATAACTCTTTACTCCCCACTATTCCACTCCTTGTCCAAACACCCTTTAATGATTATCAATAATTGGAAAGCACTAGTCATGTAATTTATTTTCTGGAAAGGATTTCCTCCACTCTTGACCCTTTAAGTTGTTCTTTTTGAAACAAAGACAAATCTGGGAAAAAGTTTGGACGCAATGAAGACTGTCAGTTGTAAGGGAAAAAGTTTGCTTGCAAAGAGTGCGGTAATGCTTGGACGGGGATTCAACTACCATGCCTCCCCTATAGTACATTTTGGACTTTTTCAGCTTTGGTAAACTTGCATATGAAAAAGCCAAAATGTCACACTATAGATTTATTACATAAAAAGGAAAGCAACAAGCTAAAGTAAACATAAGACATAAAGATAAGATAAATCGGGGTTATTTGGACATACGACCATAGGCAAACAACGCCCTGGACAAGTATGACCATGACACTAGGAGGGGGTCTTAATCTAGCTGAGATGTTCGAGTGTGCCTTCCGATTCTCTCTCTTTCTCTACTTGTTTGGCATATCTATTATTCTCATTGTATAATTCTGTTGTACTTTGAGTCTGTATTAATGAAGAAGCTTGTCTCTTGTTTTTTTTTAAAAACCATATAAATTGGTAGTATGATAATGACAGTATTAAGTTGGCTTCTTCTTCACAGCCAGCCTTCTTTCCGGATCAAGGGTTTGGGTCCCTTGAAACCTCAGGTTCCTTCTCGGGAAAATCACTGGTTAAGCATCTTTTGACATCTTCTCCTTTGGAAATTTCTTTGTACAAAAGGCTTTGGAAATCTAACAGTCCAAGAAGGATAAATATCCATATGGATTATGCTGTTAAGAAATTTTAACTATGCCTCACTACTTCAAAGAAAGGTTTCCTCCCATGCCCTCTCACCTCATGCCTGCCCCCTTTGTGATCAGTTTCAACATTAATTTATAATTTGTTTGCAAAGGTTCTCGCAGAAAGATTAAAGAAAGTAATTCCAAGTATTACTGCTCCATTACAATGTGGCTTTCTGGAAGAGCGCCAAATCTTGGATCCTAGTTTAATAGCAAATGAAACTGTGTAGGACTATAGAATCCGAAAAAAGAAAAGATGGATGTTTAAATTAGACCTTGAAAAGGCCTTTAACAGAGTGGATTGGAATTTGTAGTGTGGATTTGGGTGTCTTTTTAATCTCCATTATAGTAAAACCTGCCGTTGCAGACGGCTGGACGTAGTCCCGAGTTTGCAGTGAACCAATATAATTTTTGTTGTTCTCCTTTTTCCTTTTGCTTTATAATTTTTACTTTTATGATTTATTGCTTATTTGGTTCTAACATGTGAGTGGGAATTTGAGATATAATTTAGTTTATTTTGCATTTATTTACATTTTGCTTAAAATTCCAACGTGGAGATTCATAGAGGAGGAAAAATTCATTATGGAAGCAAGTAATAATTAGTATCCATGGCAAAGAACCCTTTGATTGGCACACGGTGGGCAAATCCAGTAGTAGCTTGAAGAGTCCATGGATTAGTATTTCAAGAGCTTGGAGGAAGGTGAAAGCCTTGGCCTTGTTCAAGCTTGGAAACGACAATAGAATTGCTTTTTGGTCTGATTTGTGGGTTGAAGATATTCTCCTTAATCTTCGATTCTCAAAGTTATTTAGAATTGCCTTGCTGCCAAGTGATTCCGTTGCTGCACATTGGGACCACTCCATTTCATCTTGGTCTATTGTCTTTTGAAGACTTCTTAAAGAAGATGAAATTTCAGACTTCCAATCTTTGTTTCACCTACTCTCACATAAGAGGCTGGTAGATTCGGCTGACAGAAGATATTGGGCCTTAGATCCATCCGACAACTTTTAAGTTAAATCCCTCTTGGCTCACCTGTCTCTCTCATCTCTGTTGGATAAAGGGATTTACAAAGCTTTGTGGAAATCTAGTAGTCCAAGGAGAGTTAACACCCTCATTTGGATTATGTTATTCGGCCTTCTGAACTGCTCCTCGGTTATGAGGAAAACTCCCCAACAGCGGCCTTTCGCCCTCAGTTTGCCCTCTTTGTATGAAGGGGAAGATTTGCTGCATTTGTTTGTTAGTTGTTCATATTCAGCTAATTGTTGAGGGAACTTGTTCTCCCTATTTGAAGTTGTTGGGTTTTTGACGGCTCATTCAACTCAAATGTTATTCAGTTACTTAGGGGCCCGATTTTGAAGAAGAGGCTGATAATTATTTGGGAAAACATGACTAAAGCCGTATTCGCGGGACTTTGGTCTGAAAGCAATCAACGAATTTTCCATGTCAAGGCAATAGGCTGGTCTGAATGAATGGACATTGCTAAAAGAAATGCAGCTTGTTGGTGCACTTTGAACAAGGAATTTCATGATTACTCTATTTGGGACCCATGCTTAAATTGGCTGGCCTTCATTCCACAAGCTTGATAGCCCTTACAACTGTTGTCTTTAGCCATTTTGGTTCTTTTTTCAGATCTCTGTCTTCGTTTAGCAGGCCATTATCCTCAAGCTCGAAGAAGTCGCTGAAGTCCATCTACTTCTTGTTCTACTTTGTTTCTGTTTAAGTTTCATTCTTGGACAGGATTTGTAGCTGCGATTGTATAATTCTTTTGTACTTTACATTATTAATAGAGGTTTCTATTATGATTATTAGAATGTAATTAGCCTATGGGGAAAGGCTTGCTTTGGTTTTGTATTTGACTGTAGTCCGTTATTTATTAGTGTTCTAGACATGATGAGAGCGCTAGGGGTGTCAACCTAGTTAAGGCCGGTCTTCTTTCAAAGAAAAAAAAAACCACGACACTTTTTTCATAGTCTCCTCTCTTCTCGCCTGTAGTCTACTCATTGTATAATCCTCTTGTGCTATGAACTTCTGATATATTAATAAAGAGGCTGTCTCCTTTAAAAAAAAACTATACTTTTTTGAACCGCTCTCATTTTTTTCGCACATTGTTGTAAGAGAAATAGTAAGATGATTGAAAACATCGATGTTATTATTCACTTTTTATAATGAAATTATTATTTTTCCCAATAGCAATGACAATGACATTTTGAGTTCTGTATTTTTATTAGGATGACTATGGAACCTGGGAAGATAACATGGCTGATGAAGGTTCTTCGAAGAAGGTACTTTCTTAACAGGACTCTCTCCAAGCAACAAGTTCATATCTTTTTAATTTTGTGAGAAAAAGTGACAGGATGGGGATTGTGCTATCTTGTGGGTCTTTGGGTGTGAGAAAGAGAAATAATAGGATTTTTAGAGGGGAGAGATCATGTGACGATATTTTGGTCTCTTTATTGATCTTATATTCTCTTTGTGCTTCAGCAAGATTATTATTATTTTTCTTATAATTTAGAAAAATTAAAGAAAAACTCCTATTGGTCTTATTATACTTGGTTGGAGTTCCTTTTTAAAGTATGCTACATTAAGGATTACAAAGTTAGAGGTTTTGAATTCAAGACAGTTTTTGCAAATGGATTGTTTGTTCATATGGTTTCAGACTCAGTGGTCTCCGTTAAGAGCAATCTTTTTCTTTTTTGGGTTGTATTTGAATATATTTGCTTAACTTTTTTGGATGAGTCTGGTTGTAGGCTTTATTTGGTTGTATTTGCTTTATTTTGCTTATTCTCTTTCATTGTACTTTGAGCCGTATACTCTTTTTGTATTTTTTAGCATTAGCCTTTTTTCATTCCCTTAATGAAAAGTTCGTTTCCTTTTCAAAAGGAAATAATCTTCTTTGTTTCAAGCTTAAAGATCACCACTTTCTTTCCTTTTCATCTCACTCACTGCTTCGTTACTACCCAAATAATGTCAATTCAATCTGCTGGCCTGAAAAACAAAAGCCGATTCTTGAAAGAAAACTATTTTATAGGACATCCTGCTTTGGGTTTTCAGTCAGAGAAGATACGAAACACATGATTGGATTTACTAAAGACAACTTGAAAGTTGCTGCTTTACCTAAAAATGGCTAAATTTTAGCTTTCCATTGTGCGTCCCACAAACATTTTCCCAAAACTTTGTGAAAGAGAATTGATTTAATTCTTATTAAAATATGGATTATTTTATCTTCATGAGAAGGAGAGGAAAAACATTTCATTCATCAAAGGCCAGGCTATATTAGTTTGTTTCAACTTAGTTTCTTTTTGTTCTTGAATTAGGACAATCTAATAAATATTTCTTCTTCACCTTTTTCTTTTGCTTTTATTTTCTGTTAGTTTTAAAATAACACTACTATTTTATTTATTAAGATAGGCTTCGCAAGCAAGGTCCTATGATGTTATTGCGGAAGAGTATTATGCTGCACGGTTGGACGCTGCAAAAGCAAAGGAAGAAGGGGACAAGAAAAGACAAGAGACTGCTGGCAACATCATTCGCAAGCTTAAACAGGAGTTGTTAGCTCAAGGTAATATTTGATTTGCGTGTTGGTTCATCTCTACTTCTCCCATCTTAATGAAAGTTTTGCTACATAAGAAAATGAAAAGGTAAAATTATCTTTTTAGTTCTCAATTTTGAGTAATAAGCGCATTTAGTCCCTTAGTATGAAGCACAAACACGGATATAAATATGAGATATAGATACGATAGGATACATCGATACACAACTTTCTGAAAAGTTATGATACAGATACGCGTGAATACATTGTCTTTAAAATATATATTTTGATCTATTTTAAATTTATATAAATTTACATGAAGATACTAATTACTAACCAAATGTAATCCACCAAAAAGAAAAAAATTTCAAATGAACAACATAAAGATACTAAATGTAATTCACCAAGTACATATTACATTTATGAATATTGGTCACATATTGCCAAAGGAGTTTTGTATAATCTTCAACAATGAAGTGTATAATCTTCAACAATGAAAGAGGTTGAGTTTAGGTAAGGGTTCGATGTTTGGTTGATTGGTCTTGACTTAAGGATGAAGATGCCATCTTAGTTCTTACCTAACTACCTACCTAAGAATTTAAGTTGAAATTAAATCAGGTTTTAAGACAGTGGAAAAAAAGAGTGAAAAAAATAACAGCATGGATTGAAACTGACCAGCGACGACAAAGGCAAAGGCAAAAACAAGGTGCAAGATCGGTTGACGGTAGGCTGGGAGGGCAAACGAAGGGGCTTGGTTGA

mRNA sequence

ATGGCTCCAAGGAAGAAGCAACAGCAGCAACCCAAGCAGAAGCAAAACAACCGAAAATCCAATTCCACTCCCTCCACCTCCGATGCTCGTCCTTCTTCCTCCGGTCCAAAGCTCAATATCTCCGCCGAAAACGAGACTCGTCTCCGTCGTCTCCTTCTGAGCTCCGGCCGCTCCACTCCATCGGTCACTCCCGCAGATGATTCGCTCTCAAAGGTCCAGAAGGTCAAGAAGCTTAAAGCCGTTTACGAGAAGCTCTCATGCGAAGGTTTTACCAATGATCAAATTGAACTGGCACTCTCCGCTATCGGGGATGGTGCTACATTTGAAGCTGCTCTTGATTGGTTATGCTTGAACTTGCCTAGTAGCGAGCTTCCATTGAAATTTTCAAGCGGAACTTCTTTGCATACACATGTAGGTGGTTCTGTTCGTATACTACAGACTGCACAAAAAGACTGTCCTTCAATGGGAGTCCAATCTTCCAAAGATGAAGATGGAGACAAAGAAGTTCCTATTATATTGAGTAGGGGTAAAGATGATGATAAGCTAGATCAGTTCCAATCATCCCAAGCTGAATGGATCAAACAGTATGTAGAGCAGCAAGAAGAGGATGACTATGGAACCTGGGAAGATAACATGGCTGATGAAGGTTCTTCGAAGAAGGCTTCGCAAGCAAGGTCCTATGATGTTATTGCGGAAGAGTATTATGCTGCACGGTTGGACGCTGCAAAAGCAAAGGAAGAAGGGGACAAGAAAAGACAAGAGACTGCTGGCAACATCATTCGCAAGCTTAAACAGGAGTTGTTAGCTCAAGCATGGATTGAAACTGACCAGCGACGACAAAGGCAAAGGCAAAAACAAGGTGCAAGATCGGTTGACGGTAGGCTGGGAGGGCAAACGAAGGGGCTTGGTTGA

Coding sequence (CDS)

ATGGCTCCAAGGAAGAAGCAACAGCAGCAACCCAAGCAGAAGCAAAACAACCGAAAATCCAATTCCACTCCCTCCACCTCCGATGCTCGTCCTTCTTCCTCCGGTCCAAAGCTCAATATCTCCGCCGAAAACGAGACTCGTCTCCGTCGTCTCCTTCTGAGCTCCGGCCGCTCCACTCCATCGGTCACTCCCGCAGATGATTCGCTCTCAAAGGTCCAGAAGGTCAAGAAGCTTAAAGCCGTTTACGAGAAGCTCTCATGCGAAGGTTTTACCAATGATCAAATTGAACTGGCACTCTCCGCTATCGGGGATGGTGCTACATTTGAAGCTGCTCTTGATTGGTTATGCTTGAACTTGCCTAGTAGCGAGCTTCCATTGAAATTTTCAAGCGGAACTTCTTTGCATACACATGTAGGTGGTTCTGTTCGTATACTACAGACTGCACAAAAAGACTGTCCTTCAATGGGAGTCCAATCTTCCAAAGATGAAGATGGAGACAAAGAAGTTCCTATTATATTGAGTAGGGGTAAAGATGATGATAAGCTAGATCAGTTCCAATCATCCCAAGCTGAATGGATCAAACAGTATGTAGAGCAGCAAGAAGAGGATGACTATGGAACCTGGGAAGATAACATGGCTGATGAAGGTTCTTCGAAGAAGGCTTCGCAAGCAAGGTCCTATGATGTTATTGCGGAAGAGTATTATGCTGCACGGTTGGACGCTGCAAAAGCAAAGGAAGAAGGGGACAAGAAAAGACAAGAGACTGCTGGCAACATCATTCGCAAGCTTAAACAGGAGTTGTTAGCTCAAGCATGGATTGAAACTGACCAGCGACGACAAAGGCAAAGGCAAAAACAAGGTGCAAGATCGGTTGACGGTAGGCTGGGAGGGCAAACGAAGGGGCTTGGTTGA
Homology
[Close]
BLAST of CSPI03G19280 vs. Swiss-Prot
Match: DEXH7_ARATH (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana GN=At1g58060 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.3e-64
Identity = 154/287 (53.66%), Postives = 198/287 (68.99%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP+KK Q+Q     N   S+S+ S S+ +  SSGPKL ISAENE RLRRLLL+SGRS P
Sbjct: 1   MAPKKKPQKQ----SNKAASSSSSSKSNYQKPSSGPKLQISAENEDRLRRLLLNSGRSGP 60

Query: 61  SV-TPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNL 120
           S+  P  +SLSK QK KKL  VYEKLSCEGF +DQIELALS++ DGATFEAALDWLCLNL
Sbjct: 61  SIPAPISNSLSKAQKTKKLNNVYEKLSCEGFVDDQIELALSSLRDGATFEAALDWLCLNL 120

Query: 121 PSSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDD 180
           PS ELP+KFS+G S     GGSV ++ T++ D       S + E+ +  V  +  +GK D
Sbjct: 121 PSHELPVKFSTGASRFPSTGGSVGVISTSRDDWNDSTDSSVRVEEEEPAV-FVRVKGKQD 180

Query: 181 --DKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAA 240
             D L   +SSQA+WI+QY+ +QEE++   WED +       K S  R +DVIA+EYY+A
Sbjct: 181 EEDTLSSDKSSQADWIRQYMMRQEEEELECWEDEVDGIDPRNKVSGPRPFDVIAKEYYSA 240

Query: 241 RLDAAKAKEEGDKKRQETAGNIIRKLKQEL----LAQAWIETDQRRQ 281
           R DA KAKE+ DK+ QE AG  IRKLKQE+    L++A +E++ +R+
Sbjct: 241 RSDAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQRE 282

[Close]
BLAST of CSPI03G19280 vs. Swiss-Prot
Match: DEXH4_ARATH (DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana GN=At1g58050 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.3e-44
Identity = 141/308 (45.78%), Postives = 189/308 (61.36%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP KK Q+  KQ +N   S+  P++   +PS + PKL IS ENE RLRRLLL+  R TP
Sbjct: 1   MAPTKKPQKN-KQSKNEIASSLIPNSGHKKPSKA-PKLLISPENEDRLRRLLLNF-RRTP 60

Query: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
           S  P   +LS  QK KKL  +YE LSCEGF ++QIEL LS++ DGAT E ALDWLCLNLP
Sbjct: 61  S--PVTATLSVTQKRKKLNNLYENLSCEGFLDNQIELVLSSLRDGATLETALDWLCLNLP 120

Query: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPI--ILSRGK- 180
           S ELP+ FS+G S     G SV ++  ++KD  ++  +SS  E   KEVP   +L R K 
Sbjct: 121 SHELPVNFSNGASRFPSTGRSVAVISKSKKDW-NVSAESSVQEV--KEVPESEVLVRVKS 180

Query: 181 -----DDDKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAE 240
                ++D L   Q SQA+WI QY+++ EE++  + +D         K S  RS++VIA+
Sbjct: 181 KRDEEEEDSLSSCQPSQADWIHQYMKRLEEEELESSDDER------DKVSGPRSFEVIAK 240

Query: 241 EYYAARLDAAKAKEEGDKKRQETAGNIIRKLKQELLA----QAWIETDQRRQRQ-----R 292
           EY   R +A KAK +GDK  Q  AG  I KLK+E+ A    +A +E++ +R RQ     R
Sbjct: 241 EYCVERYNAIKAKRKGDKSGQSQAGLAICKLKEEMNALGPSEAILESEFQRDRQDCEGAR 294

[Close]
BLAST of CSPI03G19280 vs. TrEMBL
Match: A0A0A0L9G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229400 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 6.7e-137
Identity = 265/270 (98.15%), Postives = 268/270 (99.26%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP
Sbjct: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60

Query: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
           SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP
Sbjct: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120

Query: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDDD 180
           SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSM VQSSKDEDG+K+VPIILSRGKDDD
Sbjct: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMVVQSSKDEDGNKDVPIILSRGKDDD 180

Query: 181 KLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240
           KLD+FQSSQAEWIKQYVEQQEEDDYG WEDNMADEGSSKKASQARSYDVIAEEYYAARLD
Sbjct: 181 KLDRFQSSQAEWIKQYVEQQEEDDYGIWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240

Query: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 271
           AAKAKEEGDKKRQETAGNIIRKLKQELLAQ
Sbjct: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 270

[Close]
BLAST of CSPI03G19280 vs. TrEMBL
Match: F6HK50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00800 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.3e-73
Identity = 165/272 (60.66%), Postives = 205/272 (75.37%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP+KKQQQ    K ++ KS S   TS      +GPKL ISAENE RLRRLLL+SGRS P
Sbjct: 1   MAPKKKQQQN---KPSSSKSKSKSQTS------AGPKLQISAENENRLRRLLLNSGRSGP 60

Query: 61  --SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLN 120
             S  PADD+LSK QK KKL++VYEKLSCEGF+ND IELALSA+ +GATFE+ALDWLC N
Sbjct: 61  ASSPAPADDTLSKAQKAKKLRSVYEKLSCEGFSNDHIELALSALKEGATFESALDWLCFN 120

Query: 121 LPSSELPLKFSSGTSLHTHVGGSVRILQTAQKD-CPSMGVQSSKDEDGDKEVPIILSRGK 180
           L S+ELPLKFSSGTSLH + GGS+ I+ TA++D  PS+    + ++D    + I +   +
Sbjct: 121 LSSNELPLKFSSGTSLHANEGGSIGIISTAREDWTPSVYSSGNIEDDEVSGISIRIKGRR 180

Query: 181 DDDKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAA 240
           DDD +D  Q SQA+WI+QYV QQEED+  TWED+  D+ S+KK ++ RSY+ IA+EY+AA
Sbjct: 181 DDDSVDSRQQSQADWIRQYVAQQEEDESKTWEDDAVDDYSTKKVAEPRSYETIAKEYHAA 240

Query: 241 RLDAAKAKEEGDKKRQETAGNIIRKLKQELLA 270
           RL+A  AKE+GDKK QE AG+IIRKLKQEL A
Sbjct: 241 RLEALSAKEKGDKKGQEQAGHIIRKLKQELSA 263

[Close]
BLAST of CSPI03G19280 vs. TrEMBL
Match: W9QMV9_9ROSA (ATP-dependent RNA helicase DHX29 OS=Morus notabilis GN=L484_018450 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.9e-70
Identity = 163/270 (60.37%), Postives = 199/270 (73.70%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRST- 60
           MAP+K+QQQ  KQ+   ++++S+        SSSGP+L ISAENE+RLRRLLL+SGR+  
Sbjct: 1   MAPKKQQQQ--KQRTTAKRTSSS--------SSSGPRLQISAENESRLRRLLLNSGRTAQ 60

Query: 61  PSVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNL 120
           P+  P D+SLSK QK KKLK +YEKLSCEGFTN QIELALSA+ +GATF+A+LDWLCLNL
Sbjct: 61  PAAAPVDESLSKAQKAKKLKTIYEKLSCEGFTNPQIELALSALKEGATFDASLDWLCLNL 120

Query: 121 PSSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDD 180
           PS+ELPLKFSSG S     GGSVR+L  ++ D       S K  DG+  V +      DD
Sbjct: 121 PSNELPLKFSSGISQQIDGGGSVRVLLNSRDDWTPSVDASPKINDGELGVSLKTKGRGDD 180

Query: 181 DKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAARL 240
           + LD FQ SQA+WIK+YVEQQEED+  TWED+  DEG ++K S+ R YDVIA+EY AARL
Sbjct: 181 ESLDSFQPSQADWIKRYVEQQEEDESRTWEDDF-DEGLTEKISEPRPYDVIAKEYCAARL 240

Query: 241 DAAKAKEEGDKKRQETAGNIIRKLKQELLA 270
           +A KAKE+ DKK QE AGNII KLKQE  A
Sbjct: 241 EAMKAKEKRDKKSQEQAGNIIHKLKQECSA 259

[Close]
BLAST of CSPI03G19280 vs. TrEMBL
Match: M5XY08_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000230mg PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.0e-70
Identity = 163/260 (62.69%), Postives = 191/260 (73.46%), Query Frame = 1 

Query: 11  PKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTPSVTPADDSLS 70
           PK+KQ + K NS P T+     SSGP+L ISAENE R+RRLLL+SGRS+    P D+SLS
Sbjct: 3   PKKKQTS-KQNSKPKTT-----SSGPRLQISAENENRVRRLLLNSGRSSTPAAPVDESLS 62

Query: 71  KVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLPSSELPLKFSS 130
           K QK KKLKAVYEKLSCEGFTNDQIELALSA+ +GATFEAA+DWLCLNL S+ELPLKFSS
Sbjct: 63  KAQKTKKLKAVYEKLSCEGFTNDQIELALSALKEGATFEAAVDWLCLNLTSNELPLKFSS 122

Query: 131 GTSLHTHVGGSVRILQTAQKD-CPSMGVQSSKDEDGDKEVPIILSRGKDDDKLDQFQSSQ 190
           GTSLH + GGSV I+ T++ D  PS+   +  DED    + I     +DD  LD FQ SQ
Sbjct: 123 GTSLHGNEGGSVGIILTSRDDWTPSVDTSTKIDEDA-PGISIRTKGQRDDKTLDSFQPSQ 182

Query: 191 AEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAARLDAAKAKEEGD 250
           A+WIKQYVEQQEED+  TWED+           + RSYDVIA+EY AAR +AA AK++GD
Sbjct: 183 ADWIKQYVEQQEEDESTTWEDD--------AVHKPRSYDVIAKEYRAARWEAANAKQKGD 242

Query: 251 KKRQETAGNIIRKLKQELLA 270
           KK QE AG IIR LKQEL A
Sbjct: 243 KKSQERAGCIIRNLKQELSA 247

[Close]
BLAST of CSPI03G19280 vs. TrEMBL
Match: A0A061DXK0_THECC (ATP-dependent RNA helicase, putative isoform 3 OS=Theobroma cacao GN=TCM_006225 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.6e-69
Identity = 162/272 (59.56%), Postives = 194/272 (71.32%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP+KK Q     KQ+NRK NS+   S A  SSS P+L ISAENE RLRRLLL+SG S  
Sbjct: 1   MAPKKKPQ-----KQSNRKPNSSSKASQA--SSSAPRLQISAENENRLRRLLLNSGHSAQ 60

Query: 61  SVT---PADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCL 120
           S T   P  DSLSK QK KKLKAVYEKLSCEGF+NDQIE ALS++ DGATFEAALDWLCL
Sbjct: 61  SQTDSNPVQDSLSKPQKAKKLKAVYEKLSCEGFSNDQIEFALSSLKDGATFEAALDWLCL 120

Query: 121 NLPSSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGK 180
           NLP +ELPLKFSSGTS  +  GG + ++    +D       S++ ++  + + +      
Sbjct: 121 NLPQNELPLKFSSGTSFQSD-GGPISVISFKHEDWTPSVDASTRIKENLQGLSVRTKGSA 180

Query: 181 DDDKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAA 240
           D+D L+  Q SQA+WI+QY+EQQEED+  TWED  +DE S K+ S  R YDVIA+EY+AA
Sbjct: 181 DEDSLNTCQPSQADWIRQYMEQQEEDESKTWEDETSDEDSVKEVSGPRPYDVIAKEYHAA 240

Query: 241 RLDAAKAKEEGDKKRQETAGNIIRKLKQELLA 270
           RL+A  AKE GDKK QE AGNIIRKLKQEL A
Sbjct: 241 RLEATNAKERGDKKGQEKAGNIIRKLKQELSA 264

[Close]
BLAST of CSPI03G19280 vs. TAIR10
Match: AT1G58060.1 (AT1G58060.1 RNA helicase family protein)

HSP 1 Score: 245.4 bits (625), Expect = 4.7e-65
Identity = 154/287 (53.66%), Postives = 198/287 (68.99%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP+KK Q+Q     N   S+S+ S S+ +  SSGPKL ISAENE RLRRLLL+SGRS P
Sbjct: 1   MAPKKKPQKQ----SNKAASSSSSSKSNYQKPSSGPKLQISAENEDRLRRLLLNSGRSGP 60

Query: 61  SV-TPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNL 120
           S+  P  +SLSK QK KKL  VYEKLSCEGF +DQIELALS++ DGATFEAALDWLCLNL
Sbjct: 61  SIPAPISNSLSKAQKTKKLNNVYEKLSCEGFVDDQIELALSSLRDGATFEAALDWLCLNL 120

Query: 121 PSSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDD 180
           PS ELP+KFS+G S     GGSV ++ T++ D       S + E+ +  V  +  +GK D
Sbjct: 121 PSHELPVKFSTGASRFPSTGGSVGVISTSRDDWNDSTDSSVRVEEEEPAV-FVRVKGKQD 180

Query: 181 --DKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAA 240
             D L   +SSQA+WI+QY+ +QEE++   WED +       K S  R +DVIA+EYY+A
Sbjct: 181 EEDTLSSDKSSQADWIRQYMMRQEEEELECWEDEVDGIDPRNKVSGPRPFDVIAKEYYSA 240

Query: 241 RLDAAKAKEEGDKKRQETAGNIIRKLKQEL----LAQAWIETDQRRQ 281
           R DA KAKE+ DK+ QE AG  IRKLKQE+    L++A +E++ +R+
Sbjct: 241 RSDAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQRE 282

[Close]
BLAST of CSPI03G19280 vs. TAIR10
Match: AT1G58050.1 (AT1G58050.1 RNA helicase family protein)

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 141/308 (45.78%), Postives = 189/308 (61.36%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP KK Q+  KQ +N   S+  P++   +PS + PKL IS ENE RLRRLLL+  R TP
Sbjct: 1   MAPTKKPQKN-KQSKNEIASSLIPNSGHKKPSKA-PKLLISPENEDRLRRLLLNF-RRTP 60

Query: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
           S  P   +LS  QK KKL  +YE LSCEGF ++QIEL LS++ DGAT E ALDWLCLNLP
Sbjct: 61  S--PVTATLSVTQKRKKLNNLYENLSCEGFLDNQIELVLSSLRDGATLETALDWLCLNLP 120

Query: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPI--ILSRGK- 180
           S ELP+ FS+G S     G SV ++  ++KD  ++  +SS  E   KEVP   +L R K 
Sbjct: 121 SHELPVNFSNGASRFPSTGRSVAVISKSKKDW-NVSAESSVQEV--KEVPESEVLVRVKS 180

Query: 181 -----DDDKLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAE 240
                ++D L   Q SQA+WI QY+++ EE++  + +D         K S  RS++VIA+
Sbjct: 181 KRDEEEEDSLSSCQPSQADWIHQYMKRLEEEELESSDDER------DKVSGPRSFEVIAK 240

Query: 241 EYYAARLDAAKAKEEGDKKRQETAGNIIRKLKQELLA----QAWIETDQRRQRQ-----R 292
           EY   R +A KAK +GDK  Q  AG  I KLK+E+ A    +A +E++ +R RQ     R
Sbjct: 241 EYCVERYNAIKAKRKGDKSGQSQAGLAICKLKEEMNALGPSEAILESEFQRDRQDCEGAR 294

[Close]
BLAST of CSPI03G19280 vs. NCBI nr
Match: gi|778680313|ref|XP_011651287.1| (PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis sativus])

HSP 1 Score: 495.0 bits (1273), Expect = 9.6e-137
Identity = 265/270 (98.15%), Postives = 268/270 (99.26%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP
Sbjct: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60

Query: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
           SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP
Sbjct: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120

Query: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDDD 180
           SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSM VQSSKDEDG+K+VPIILSRGKDDD
Sbjct: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMVVQSSKDEDGNKDVPIILSRGKDDD 180

Query: 181 KLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240
           KLD+FQSSQAEWIKQYVEQQEEDDYG WEDNMADEGSSKKASQARSYDVIAEEYYAARLD
Sbjct: 181 KLDRFQSSQAEWIKQYVEQQEEDDYGIWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240

Query: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 271
           AAKAKEEGDKKRQETAGNIIRKLKQELLAQ
Sbjct: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 270

[Close]
BLAST of CSPI03G19280 vs. NCBI nr
Match: gi|700202481|gb|KGN57614.1| (hypothetical protein Csa_3G229400 [Cucumis sativus])

HSP 1 Score: 495.0 bits (1273), Expect = 9.6e-137
Identity = 265/270 (98.15%), Postives = 268/270 (99.26%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP
Sbjct: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60

Query: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
           SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP
Sbjct: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120

Query: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDDD 180
           SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSM VQSSKDEDG+K+VPIILSRGKDDD
Sbjct: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMVVQSSKDEDGNKDVPIILSRGKDDD 180

Query: 181 KLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240
           KLD+FQSSQAEWIKQYVEQQEEDDYG WEDNMADEGSSKKASQARSYDVIAEEYYAARLD
Sbjct: 181 KLDRFQSSQAEWIKQYVEQQEEDDYGIWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240

Query: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 271
           AAKAKEEGDKKRQETAGNIIRKLKQELLAQ
Sbjct: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 270

[Close]
BLAST of CSPI03G19280 vs. NCBI nr
Match: gi|659112040|ref|XP_008456036.1| (PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis melo])

HSP 1 Score: 490.3 bits (1261), Expect = 2.4e-135
Identity = 261/270 (96.67%), Postives = 267/270 (98.89%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSS RSTP
Sbjct: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSARSTP 60

Query: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
           SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP
Sbjct: 61  SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120

Query: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKDDD 180
           SSELPLKFSSGTSLHTHVGGSVRILQTAQK CPSMGVQSSKDEDGD++VP+ILSR KDDD
Sbjct: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKHCPSMGVQSSKDEDGDRDVPVILSRRKDDD 180

Query: 181 KLDQFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSKKASQARSYDVIAEEYYAARLD 240
           KLD+FQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSS++ASQARSYDVIAEEYYAARLD
Sbjct: 181 KLDRFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSREASQARSYDVIAEEYYAARLD 240

Query: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 271
           AAKAKEEGDKKRQETAGNIIRKLKQELLAQ
Sbjct: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQ 270

[Close]
BLAST of CSPI03G19280 vs. NCBI nr
Match: gi|1009118405|ref|XP_015875844.1| (PREDICTED: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 [Ziziphus jujuba])

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-75
Identity = 169/272 (62.13%), Postives = 205/272 (75.37%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP+KKQQ         +K++ST +      SSSGP+L ISAENE+RLRRLLL+SGRS+ 
Sbjct: 1   MAPKKKQQ---------KKNSSTATAKTQTSSSSGPRLQISAENESRLRRLLLNSGRSSG 60

Query: 61  SVTPA--DDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLN 120
           +   A  D+SLSK QK KKLK++YE LSCEGFTNDQIELALSA+ +GATFEAALDWLCLN
Sbjct: 61  ASAAALVDESLSKAQKAKKLKSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLN 120

Query: 121 LPSSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKD 180
           LP +ELPLKFSSGTS HT+ GGSV ++ TA++D      QSS   + +  + I      D
Sbjct: 121 LPGNELPLKFSSGTSTHTNGGGSVGVILTAREDWTPSVDQSSTPNEDEPGISIRTKGRWD 180

Query: 181 DDKLDQFQSSQAEWIKQYVEQQEEDDYG-TWEDNMADEGSSKKASQARSYDVIAEEYYAA 240
           D+ LD  QSSQA+WIK+YVEQ+EED+   TWED++ DEGS+KK S+ RSYDVIAEEY  A
Sbjct: 181 DETLDSCQSSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVA 240

Query: 241 RLDAAKAKEEGDKKRQETAGNIIRKLKQELLA 270
           RL+A KAKE GDKK QE AG+IIRK+KQEL A
Sbjct: 241 RLEAVKAKERGDKKSQEQAGHIIRKVKQELSA 263

[Close]
BLAST of CSPI03G19280 vs. NCBI nr
Match: gi|1009118403|ref|XP_015875842.1| (PREDICTED: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-75
Identity = 169/272 (62.13%), Postives = 205/272 (75.37%), Query Frame = 1 

Query: 1   MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTP 60
           MAP+KKQQ         +K++ST +      SSSGP+L ISAENE+RLRRLLL+SGRS+ 
Sbjct: 1   MAPKKKQQ---------KKNSSTATAKTQTSSSSGPRLQISAENESRLRRLLLNSGRSSG 60

Query: 61  SVTPA--DDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLN 120
           +   A  D+SLSK QK KKLK++YE LSCEGFTNDQIELALSA+ +GATFEAALDWLCLN
Sbjct: 61  ASAAALVDESLSKAQKAKKLKSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLN 120

Query: 121 LPSSELPLKFSSGTSLHTHVGGSVRILQTAQKDCPSMGVQSSKDEDGDKEVPIILSRGKD 180
           LP +ELPLKFSSGTS HT+ GGSV ++ TA++D      QSS   + +  + I      D
Sbjct: 121 LPGNELPLKFSSGTSTHTNGGGSVGVILTAREDWTPSVDQSSTPNEDEPGISIRTKGRWD 180

Query: 181 DDKLDQFQSSQAEWIKQYVEQQEEDDYG-TWEDNMADEGSSKKASQARSYDVIAEEYYAA 240
           D+ LD  QSSQA+WIK+YVEQ+EED+   TWED++ DEGS+KK S+ RSYDVIAEEY  A
Sbjct: 181 DETLDSCQSSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVA 240

Query: 241 RLDAAKAKEEGDKKRQETAGNIIRKLKQELLA 270
           RL+A KAKE GDKK QE AG+IIRK+KQEL A
Sbjct: 241 RLEAVKAKERGDKKSQEQAGHIIRKVKQELSA 263

The following BLAST results are available for this feature:
BLAST of CSPI03G19280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DEXH7_ARATH8.3e-6453.66DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana... [more]
DEXH4_ARATH3.3e-4445.78DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana... [more]
BLAST of CSPI03G19280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9G2_CUCSA6.7e-13798.15Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229400 PE=4 SV=1[more]
F6HK50_VITVI2.3e-7360.66Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00800 PE=4 SV=... [more]
W9QMV9_9ROSA1.9e-7060.37ATP-dependent RNA helicase DHX29 OS=Morus notabilis GN=L484_018450 PE=4 SV=1[more]
M5XY08_PRUPE7.0e-7062.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000230mg PE=4 SV=1[more]
A0A061DXK0_THECC4.6e-6959.56ATP-dependent RNA helicase, putative isoform 3 OS=Theobroma cacao GN=TCM_006225 ... [more]
BLAST of CSPI03G19280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G58060.14.7e-6553.66 RNA helicase family protein[more]
AT1G58050.11.8e-4545.78 RNA helicase family protein[more]
BLAST of CSPI03G19280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680313|ref|XP_011651287.1|9.6e-13798.15PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis sativus][more]
gi|700202481|gb|KGN57614.1|9.6e-13798.15hypothetical protein Csa_3G229400 [Cucumis sativus][more]
gi|659112040|ref|XP_008456036.1|2.4e-13596.67PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis melo][more]
gi|1009118405|ref|XP_015875844.1|1.6e-7562.13PREDICTED: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 [... [more]
gi|1009118403|ref|XP_015875842.1|1.6e-7562.13PREDICTED: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004386 helicase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G19280.1CSPI03G19280.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G19280Cla004303Watermelon (97103) v1cpiwmB242
CSPI03G19280Csa3G229400Cucumber (Chinese Long) v2cpicuB120
CSPI03G19280Cucsa.032690Cucumber (Gy14) v1cgycpiB003
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G19280Melon (DHL92) v3.6.1cpimedB239
CSPI03G19280Cucumber (Gy14) v2cgybcpiB110
CSPI03G19280Silver-seed gourdcarcpiB0047
CSPI03G19280Silver-seed gourdcarcpiB0685
CSPI03G19280Cucumber (Chinese Long) v3cpicucB144
CSPI03G19280Watermelon (97103) v2cpiwmbB221
CSPI03G19280Wax gourdcpiwgoB283
CSPI03G19280Cucurbita maxima (Rimu)cmacpiB326
CSPI03G19280Cucurbita maxima (Rimu)cmacpiB705
CSPI03G19280Cucurbita moschata (Rifu)cmocpiB315
CSPI03G19280Cucurbita moschata (Rifu)cmocpiB698
CSPI03G19280Melon (DHL92) v3.5.1cpimeB241
CSPI03G19280Watermelon (Charleston Gray)cpiwcgB237
CSPI03G19280Cucurbita pepo (Zucchini)cpecpiB208
CSPI03G19280Cucurbita pepo (Zucchini)cpecpiB388
CSPI03G19280Bottle gourd (USVL1VR-Ls)cpilsiB209