CSPI03G19270 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G19270
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	BnaC06g16260D protein
Location	Chr3 : 15074047 .. 15074862 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAGCCAATTAACTTTAACTCAGATTTTGACTTACCTGGTCATTCTTCTGTTGAATTTCTTCCACCTCCGAGAGATGATAACCGAATGAGTTCTGGTGGATGTATGCCTTTTGTTAGTAACAAAAAGAGAGTGGCTGACCCTGATATCGACAACCCAACTCAGTCTCTTAATGGCGGGAACAAGAGGTTAAGGAGCGAAGGTCCTCTTGACTATGATAAGTGTATGGATAACGTACAACAGTGGCTTAATACAGCAAGGATAATGTACGCAGAGAAAGAACAGGTTCATCAGCAGGCCACTATGAATCAGCAATACTTGCTTCATGAGCTGCAGCAGAGAGAGACCTTTATTGAACATTTGAGAAAGACAAAGTTTGAGGAGCAACAGAAGATGCAATCTGATATTTACCGGCTTGAGCGCGAGCTCTATGTTATGGGAAATCTATTGGACGGCTACAGAAAGGCATTGAGGGAAACAAACAAAACGTTTGCAGACTATAGGACCCAATGCTCACAATCTGATGAACCACTCTACAAAGATGTTGCTGGTTCTGGTGGTCTTGTTCTGAGCACCATGGAACTGGAAAGGATACGTTTGAAGCAGGCAGAGGAAGATAGACTAAGCCGCTTAATTATTGAGAAGTTCAAAGCCTTGGAAGACAAGTTTGTTGACATATTTCATGCTCATCTGCAGCAGGTTAGTTTGTTGGATAGTAGGCTGCTTGAATTTGGAAATGAAGTGAAAACTCTGAGGGAATCACTTGAAAATAAGAAAGTTGCCGAAATTTCAGAATCCATTTCAAATGAATGA

mRNA sequence

ATGACTGAGCCAATTAACTTTAACTCAGATTTTGACTTACCTGGTCATTCTTCTGTTGAATTTCTTCCACCTCCGAGAGATGATAACCGAATGAGTTCTGGTGGATGTATGCCTTTTGTTAGTAACAAAAAGAGAGTGGCTGACCCTGATATCGACAACCCAACTCAGTCTCTTAATGGCGGGAACAAGAGGTTAAGGAGCGAAGGTCCTCTTGACTATGATAAGTGTATGGATAACGTACAACAGTGGCTTAATACAGCAAGGATAATGTACGCAGAGAAAGAACAGGTTCATCAGCAGGCCACTATGAATCAGCAATACTTGCTTCATGAGCTGCAGCAGAGAGAGACCTTTATTGAACATTTGAGAAAGACAAAGTTTGAGGAGCAACAGAAGATGCAATCTGATATTTACCGGCTTGAGCGCGAGCTCTATGTTATGGGAAATCTATTGGACGGCTACAGAAAGGCATTGAGGGAAACAAACAAAACGTTTGCAGACTATAGGACCCAATGCTCACAATCTGATGAACCACTCTACAAAGATGTTGCTGGTTCTGGTGGTCTTGTTCTGAGCACCATGGAACTGGAAAGGATACGTTTGAAGCAGGCAGAGGAAGATAGACTAAGCCGCTTAATTATTGAGAAGTTCAAAGCCTTGGAAGACAAGTTTGTTGACATATTTCATGCTCATCTGCAGCAGGTTAGTTTGTTGGATAGTAGGCTGCTTGAATTTGGAAATGAAGTGAAAACTCTGAGGGAATCACTTGAAAATAAGAAAGTTGCCGAAATTTCAGAATCCATTTCAAATGAATGA

Coding sequence (CDS)

ATGACTGAGCCAATTAACTTTAACTCAGATTTTGACTTACCTGGTCATTCTTCTGTTGAATTTCTTCCACCTCCGAGAGATGATAACCGAATGAGTTCTGGTGGATGTATGCCTTTTGTTAGTAACAAAAAGAGAGTGGCTGACCCTGATATCGACAACCCAACTCAGTCTCTTAATGGCGGGAACAAGAGGTTAAGGAGCGAAGGTCCTCTTGACTATGATAAGTGTATGGATAACGTACAACAGTGGCTTAATACAGCAAGGATAATGTACGCAGAGAAAGAACAGGTTCATCAGCAGGCCACTATGAATCAGCAATACTTGCTTCATGAGCTGCAGCAGAGAGAGACCTTTATTGAACATTTGAGAAAGACAAAGTTTGAGGAGCAACAGAAGATGCAATCTGATATTTACCGGCTTGAGCGCGAGCTCTATGTTATGGGAAATCTATTGGACGGCTACAGAAAGGCATTGAGGGAAACAAACAAAACGTTTGCAGACTATAGGACCCAATGCTCACAATCTGATGAACCACTCTACAAAGATGTTGCTGGTTCTGGTGGTCTTGTTCTGAGCACCATGGAACTGGAAAGGATACGTTTGAAGCAGGCAGAGGAAGATAGACTAAGCCGCTTAATTATTGAGAAGTTCAAAGCCTTGGAAGACAAGTTTGTTGACATATTTCATGCTCATCTGCAGCAGGTTAGTTTGTTGGATAGTAGGCTGCTTGAATTTGGAAATGAAGTGAAAACTCTGAGGGAATCACTTGAAAATAAGAAAGTTGCCGAAATTTCAGAATCCATTTCAAATGAATGA

Homology

[Close]

BLAST of CSPI03G19270 vs. TrEMBL
Match: A0A0A0LAE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229380 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.1e-125
Identity = 228/234 (97.44%), Postives = 231/234 (98.72%), Query Frame = 1


Query: 1   MTEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNG 60
           MTEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNG
Sbjct: 1   MTEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNG 60

Query: 61  GNKRLRSEGPLDYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRETFIE 120
           GNKRLRSEGPLDYDKCMDNVQQWL+ AR+MYAEKEQVHQQATMNQQYLLHELQQRETFIE
Sbjct: 61  GNKRLRSEGPLDYDKCMDNVQQWLDKARMMYAEKEQVHQQATMNQQYLLHELQQRETFIE 120

Query: 121 HLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSDEPLY 180
           HLRKTK+EEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNK FADYRTQCSQSDEPLY
Sbjct: 121 HLRKTKYEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKAFADYRTQCSQSDEPLY 180

Query: 181 KDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIEKFKALEDKFVDIFHAHLQQ 235
           KDVAGSGGLVLSTMELERIRLK AEEDRLSRLIIEKFKALEDKFVDIFHAHLQQ
Sbjct: 181 KDVAGSGGLVLSTMELERIRLKHAEEDRLSRLIIEKFKALEDKFVDIFHAHLQQ 234

[Close]

BLAST of CSPI03G19270 vs. TrEMBL
Match: A0A061DNE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_003618 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.5e-60
Identity = 142/277 (51.26%), Postives = 181/277 (65.34%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +   SS EFL    D  R +  G   F+SN  KR    D D    SLNG
Sbjct: 480 TPDLPFAAGLHIRDSSSGEFLVSRGD--RQTVPGVSSFLSNGNKREIGHDNDFSHHSLNG 539

Query: 62  GNKRLRSEGPL-----DYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQR 121
            NKRLR++G       D+D CM+ +Q W+  AR++YA KEQ    ++M+QQ LL ELQ+R
Sbjct: 540 SNKRLRTDGQWVDKSSDFDMCMEQMQHWIGKARMLYAAKEQACGDSSMHQQMLLDELQRR 599

Query: 122 ETFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQS 181
           E+ IEHL K K+EEQ K Q ++YRLERELY+M NLLDGYRKAL+ETN+ FA+YR  C   
Sbjct: 600 ESIIEHLHKAKYEEQHKRQVEVYRLERELYMMENLLDGYRKALKETNRAFAEYRACCPLP 659

Query: 182 DEPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQ 241
           DEPLYKDV+GSGGLVLSTMELE+ RLKQ EE+RL+RL+IE K K  E+ ++  F  H   
Sbjct: 660 DEPLYKDVSGSGGLVLSTMELEKQRLKQEEEERLNRLLIEKKIKDFEEGWIGKFDLHEDA 719

Query: 242 VSLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           VSLL  RL+    +VK L+E   N KV++  E + NE
Sbjct: 720 VSLLGKRLINAEKDVKLLKERSANLKVSDALECVPNE 754

[Close]

BLAST of CSPI03G19270 vs. TrEMBL
Match: A0A0D2T707_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G124400 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 140/276 (50.72%), Postives = 181/276 (65.58%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +  +SS EFL    D   + +     F+SN  KR    + D    SLN 
Sbjct: 446 TADVPFTTGLHIRDNSSGEFLVSRVDARTVPA--VSSFLSNGNKREIGHENDISHNSLNL 505

Query: 62  GNKRLRSEGPLD----YDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRE 121
            NKRLR++   D    +D CM+ +Q W++ AR++YA K+Q    ++M+QQ LLHELQ+R+
Sbjct: 506 SNKRLRTDEQWDKSSDFDTCMEQMQHWMDKARMLYAAKDQACGDSSMHQQVLLHELQRRD 565

Query: 122 TFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSD 181
           T IEHL+K KFEEQQK Q ++YRLERELY+M NLLDGYRKAL+ETN+TFA+YR +C   D
Sbjct: 566 TLIEHLQKAKFEEQQKRQMEVYRLERELYLMENLLDGYRKALKETNRTFAEYRARCPLPD 625

Query: 182 EPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQV 241
           EPLYKDV GSGGLVLST E+E++RLKQ EEDRL+RL+IE K K  E  ++  F AH   V
Sbjct: 626 EPLYKDVTGSGGLVLSTREIEKLRLKQEEEDRLNRLLIENKIKDFEAGWIRKFDAHKDAV 685

Query: 242 SLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           SLL  +L    NEVK L+E    K  A   E + NE
Sbjct: 686 SLLSDKLTNAENEVKLLKELCNRKVSAGTPECVPNE 719

[Close]

BLAST of CSPI03G19270 vs. TrEMBL
Match: A0A0D2UT32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G124400 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 140/276 (50.72%), Postives = 181/276 (65.58%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +  +SS EFL    D   + +     F+SN  KR    + D    SLN 
Sbjct: 236 TADVPFTTGLHIRDNSSGEFLVSRVDARTVPA--VSSFLSNGNKREIGHENDISHNSLNL 295

Query: 62  GNKRLRSEGPLD----YDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRE 121
            NKRLR++   D    +D CM+ +Q W++ AR++YA K+Q    ++M+QQ LLHELQ+R+
Sbjct: 296 SNKRLRTDEQWDKSSDFDTCMEQMQHWMDKARMLYAAKDQACGDSSMHQQVLLHELQRRD 355

Query: 122 TFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSD 181
           T IEHL+K KFEEQQK Q ++YRLERELY+M NLLDGYRKAL+ETN+TFA+YR +C   D
Sbjct: 356 TLIEHLQKAKFEEQQKRQMEVYRLERELYLMENLLDGYRKALKETNRTFAEYRARCPLPD 415

Query: 182 EPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQV 241
           EPLYKDV GSGGLVLST E+E++RLKQ EEDRL+RL+IE K K  E  ++  F AH   V
Sbjct: 416 EPLYKDVTGSGGLVLSTREIEKLRLKQEEEDRLNRLLIENKIKDFEAGWIRKFDAHKDAV 475

Query: 242 SLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           SLL  +L    NEVK L+E    K  A   E + NE
Sbjct: 476 SLLSDKLTNAENEVKLLKELCNRKVSAGTPECVPNE 509

[Close]

BLAST of CSPI03G19270 vs. TrEMBL
Match: A0A0D2RLA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G124400 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 140/276 (50.72%), Postives = 181/276 (65.58%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +  +SS EFL    D   + +     F+SN  KR    + D    SLN 
Sbjct: 465 TADVPFTTGLHIRDNSSGEFLVSRVDARTVPA--VSSFLSNGNKREIGHENDISHNSLNL 524

Query: 62  GNKRLRSEGPLD----YDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRE 121
            NKRLR++   D    +D CM+ +Q W++ AR++YA K+Q    ++M+QQ LLHELQ+R+
Sbjct: 525 SNKRLRTDEQWDKSSDFDTCMEQMQHWMDKARMLYAAKDQACGDSSMHQQVLLHELQRRD 584

Query: 122 TFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSD 181
           T IEHL+K KFEEQQK Q ++YRLERELY+M NLLDGYRKAL+ETN+TFA+YR +C   D
Sbjct: 585 TLIEHLQKAKFEEQQKRQMEVYRLERELYLMENLLDGYRKALKETNRTFAEYRARCPLPD 644

Query: 182 EPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQV 241
           EPLYKDV GSGGLVLST E+E++RLKQ EEDRL+RL+IE K K  E  ++  F AH   V
Sbjct: 645 EPLYKDVTGSGGLVLSTREIEKLRLKQEEEDRLNRLLIENKIKDFEAGWIRKFDAHKDAV 704

Query: 242 SLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           SLL  +L    NEVK L+E    K  A   E + NE
Sbjct: 705 SLLSDKLTNAENEVKLLKELCNRKVSAGTPECVPNE 738

[Close]

BLAST of CSPI03G19270 vs. TAIR10
Match: AT3G58110.1 (AT3G58110.1 unknown protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44
Identity = 108/274 (39.42%), Postives = 163/274 (59.49%), Query Frame = 1


Query: 4   PINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFV---SNKKRVADPDIDNPTQSLNG 63
           P+ +NS   + G+S        R +  M+ G     +    N KR  + +      S N 
Sbjct: 498 PLGYNSGLQIHGNSIGGDFLASRGEMHMAMGSGSSSLFGNGNNKREIEHENGITYHSHNP 557

Query: 64  GNKRLRSEGPL------DYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQ 123
            NKRLR+E P         D C+D +  W   AR+ +AEK++  +Q+ +NQQYL++ELQ 
Sbjct: 558 INKRLRTEEPSWDEKPPPVDMCLDQMAYWAEKARLSFAEKDREREQSVINQQYLMNELQS 617

Query: 124 RETFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCS- 183
           +   I+ L +TKFEEQQ+    IY+LE EL +M ++++GYRKAL+ T K   ++R +C  
Sbjct: 618 KTAMIQELERTKFEEQQRKDIMIYKLESELRMMTSVVEGYRKALKITQKASREHRKRCPL 677

Query: 184 QSDEPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIEK-FKALEDKFVDIFHAHL 243
           + D+ +Y DV GSGGLVLST E+E++RLKQ EEDR+ R++ ++     E  +++ F  H+
Sbjct: 678 RDDKQVYMDVKGSGGLVLSTTEIEKLRLKQEEEDRMQRVLAKRQIDDFEHNWLNKFEEHM 737

Query: 244 QQVSLLDSRLLEFGNEVKTLRESLENKKVAEISE 267
           + V LL+ RL+E  +EVK LRE+L   K  E SE
Sbjct: 738 EAVELLNERLIENEDEVKILRETLSESKNIETSE 771

[Close]

BLAST of CSPI03G19270 vs. TAIR10
Match: AT2G42370.1 (AT2G42370.1 unknown protein)

HSP 1 Score: 144.8 bits (364), Expect = 7.7e-35
Identity = 92/270 (34.07%), Postives = 157/270 (58.15%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPD-----IDNPTQ 61
           T  + +NS   + G S+ +FL P R    M  G       NK+     +      DNP  
Sbjct: 440 TSTLGYNSGLQVHGSSTCDFLAP-RAVMHMVPGRSHFGNDNKREFGHENDISYHFDNPAS 499

Query: 62  SLNGGNKRLRS----EGPLDYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHEL 121
           +     KRL++    + P+ +D CM+ ++   + A++ Y EK+Q   ++ M +Q L +EL
Sbjct: 500 T-----KRLKTPSWDDKPVPFDICMEQIKHLADKAKLSYVEKDQACGESNMREQMLQNEL 559

Query: 122 QQRETFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQC 181
           Q+RE  I+ L K  +EE  K   +IY+LE EL +M ++L  Y+KAL+E+ K    +R  C
Sbjct: 560 QRREDIIQQLHKESYEELHKKNVEIYKLENELRMMTSVLAWYQKALKESQKACRKHRKVC 619

Query: 182 SQSDEPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIEK-FKALEDKFVDIFHAH 241
              D+P+Y DV G+GGLVLST E+E++RLK+ +E+ + R++IE+  K +   ++  +  +
Sbjct: 620 PLLDKPIYIDVKGTGGLVLSTAEIEKLRLKEEKEEGMRRVLIERQVKEVGSLWIKEYEVN 679

Query: 242 L-QQVSLLDSRLLEFGNEVKTLRESLENKK 261
           L ++V LLD +L+ F N++K L+E++  ++
Sbjct: 680 LKKKVELLDGKLIGFQNKMKLLKETISRRE 703

[Close]

BLAST of CSPI03G19270 vs. NCBI nr
Match: gi|659113041|ref|XP_008456415.1| (PREDICTED: DNA ligase 1 [Cucumis melo])

HSP 1 Score: 491.5 bits (1264), Expect = 9.5e-136
Identity = 251/271 (92.62%), Postives = 258/271 (95.20%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNGG 61
           TEPINFNS+FDL GHSSVEFLPPPRDDNRMSSGGC+PFVSN KRV DPDIDNP QSLNGG
Sbjct: 547 TEPINFNSEFDLQGHSSVEFLPPPRDDNRMSSGGCIPFVSNNKRVIDPDIDNPAQSLNGG 606

Query: 62  NKRLRSEGPLDYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRETFIEH 121
           NKRLRSEGPLDYDKCMDNVQQWL+ AR+MYAEKEQVHQQATMNQQYLLHELQQRETFIEH
Sbjct: 607 NKRLRSEGPLDYDKCMDNVQQWLDKARMMYAEKEQVHQQATMNQQYLLHELQQRETFIEH 666

Query: 122 LRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSDEPLYK 181
           LRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNK FADYRT+C QSDEPLYK
Sbjct: 667 LRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKAFADYRTRCPQSDEPLYK 726

Query: 182 DVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQVSLLDS 241
           DVAGSGGLVLSTMELERIRLKQAEEDRLSRL+IE KFKALEDKFVDIFHAHLQQVS LDS
Sbjct: 727 DVAGSGGLVLSTMELERIRLKQAEEDRLSRLVIEKKFKALEDKFVDIFHAHLQQVSSLDS 786

Query: 242 RLLEFGNEVKTLRESLENKKVAEISESISNE 272
           RLLEFGNEVKTLRESL NKK +E SE ISNE
Sbjct: 787 RLLEFGNEVKTLRESLANKKASETSEPISNE 817

[Close]

BLAST of CSPI03G19270 vs. NCBI nr
Match: gi|700202479|gb|KGN57612.1| (hypothetical protein Csa_3G229380 [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 1.5e-125
Identity = 228/234 (97.44%), Postives = 231/234 (98.72%), Query Frame = 1


Query: 1   MTEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNG 60
           MTEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNG
Sbjct: 1   MTEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSNKKRVADPDIDNPTQSLNG 60

Query: 61  GNKRLRSEGPLDYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRETFIE 120
           GNKRLRSEGPLDYDKCMDNVQQWL+ AR+MYAEKEQVHQQATMNQQYLLHELQQRETFIE
Sbjct: 61  GNKRLRSEGPLDYDKCMDNVQQWLDKARMMYAEKEQVHQQATMNQQYLLHELQQRETFIE 120

Query: 121 HLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSDEPLY 180
           HLRKTK+EEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNK FADYRTQCSQSDEPLY
Sbjct: 121 HLRKTKYEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKAFADYRTQCSQSDEPLY 180

Query: 181 KDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIEKFKALEDKFVDIFHAHLQQ 235
           KDVAGSGGLVLSTMELERIRLK AEEDRLSRLIIEKFKALEDKFVDIFHAHLQQ
Sbjct: 181 KDVAGSGGLVLSTMELERIRLKHAEEDRLSRLIIEKFKALEDKFVDIFHAHLQQ 234

[Close]

BLAST of CSPI03G19270 vs. NCBI nr
Match: gi|590714849|ref|XP_007050028.1| (Uncharacterized protein TCM_003618 [Theobroma cacao])

HSP 1 Score: 240.0 bits (611), Expect = 5.0e-60
Identity = 142/277 (51.26%), Postives = 181/277 (65.34%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +   SS EFL    D  R +  G   F+SN  KR    D D    SLNG
Sbjct: 480 TPDLPFAAGLHIRDSSSGEFLVSRGD--RQTVPGVSSFLSNGNKREIGHDNDFSHHSLNG 539

Query: 62  GNKRLRSEGPL-----DYDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQR 121
            NKRLR++G       D+D CM+ +Q W+  AR++YA KEQ    ++M+QQ LL ELQ+R
Sbjct: 540 SNKRLRTDGQWVDKSSDFDMCMEQMQHWIGKARMLYAAKEQACGDSSMHQQMLLDELQRR 599

Query: 122 ETFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQS 181
           E+ IEHL K K+EEQ K Q ++YRLERELY+M NLLDGYRKAL+ETN+ FA+YR  C   
Sbjct: 600 ESIIEHLHKAKYEEQHKRQVEVYRLERELYMMENLLDGYRKALKETNRAFAEYRACCPLP 659

Query: 182 DEPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQ 241
           DEPLYKDV+GSGGLVLSTMELE+ RLKQ EE+RL+RL+IE K K  E+ ++  F  H   
Sbjct: 660 DEPLYKDVSGSGGLVLSTMELEKQRLKQEEEERLNRLLIEKKIKDFEEGWIGKFDLHEDA 719

Query: 242 VSLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           VSLL  RL+    +VK L+E   N KV++  E + NE
Sbjct: 720 VSLLGKRLINAEKDVKLLKERSANLKVSDALECVPNE 754

[Close]

BLAST of CSPI03G19270 vs. NCBI nr
Match: gi|823244312|ref|XP_012454814.1| (PREDICTED: uncharacterized protein LOC105776605 [Gossypium raimondii])

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 140/276 (50.72%), Postives = 181/276 (65.58%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +  +SS EFL    D   + +     F+SN  KR    + D    SLN 
Sbjct: 465 TADVPFTTGLHIRDNSSGEFLVSRVDARTVPA--VSSFLSNGNKREIGHENDISHNSLNL 524

Query: 62  GNKRLRSEGPLD----YDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRE 121
            NKRLR++   D    +D CM+ +Q W++ AR++YA K+Q    ++M+QQ LLHELQ+R+
Sbjct: 525 SNKRLRTDEQWDKSSDFDTCMEQMQHWMDKARMLYAAKDQACGDSSMHQQVLLHELQRRD 584

Query: 122 TFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSD 181
           T IEHL+K KFEEQQK Q ++YRLERELY+M NLLDGYRKAL+ETN+TFA+YR +C   D
Sbjct: 585 TLIEHLQKAKFEEQQKRQMEVYRLERELYLMENLLDGYRKALKETNRTFAEYRARCPLPD 644

Query: 182 EPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQV 241
           EPLYKDV GSGGLVLST E+E++RLKQ EEDRL+RL+IE K K  E  ++  F AH   V
Sbjct: 645 EPLYKDVTGSGGLVLSTREIEKLRLKQEEEDRLNRLLIENKIKDFEAGWIRKFDAHKDAV 704

Query: 242 SLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           SLL  +L    NEVK L+E    K  A   E + NE
Sbjct: 705 SLLSDKLTNAENEVKLLKELCNRKVSAGTPECVPNE 738

[Close]

BLAST of CSPI03G19270 vs. NCBI nr
Match: gi|763804515|gb|KJB71453.1| (hypothetical protein B456_011G124400 [Gossypium raimondii])

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 140/276 (50.72%), Postives = 181/276 (65.58%), Query Frame = 1


Query: 2   TEPINFNSDFDLPGHSSVEFLPPPRDDNRMSSGGCMPFVSN-KKRVADPDIDNPTQSLNG 61
           T  + F +   +  +SS EFL    D   + +     F+SN  KR    + D    SLN 
Sbjct: 446 TADVPFTTGLHIRDNSSGEFLVSRVDARTVPA--VSSFLSNGNKREIGHENDISHNSLNL 505

Query: 62  GNKRLRSEGPLD----YDKCMDNVQQWLNTARIMYAEKEQVHQQATMNQQYLLHELQQRE 121
            NKRLR++   D    +D CM+ +Q W++ AR++YA K+Q    ++M+QQ LLHELQ+R+
Sbjct: 506 SNKRLRTDEQWDKSSDFDTCMEQMQHWMDKARMLYAAKDQACGDSSMHQQVLLHELQRRD 565

Query: 122 TFIEHLRKTKFEEQQKMQSDIYRLERELYVMGNLLDGYRKALRETNKTFADYRTQCSQSD 181
           T IEHL+K KFEEQQK Q ++YRLERELY+M NLLDGYRKAL+ETN+TFA+YR +C   D
Sbjct: 566 TLIEHLQKAKFEEQQKRQMEVYRLERELYLMENLLDGYRKALKETNRTFAEYRARCPLPD 625

Query: 182 EPLYKDVAGSGGLVLSTMELERIRLKQAEEDRLSRLIIE-KFKALEDKFVDIFHAHLQQV 241
           EPLYKDV GSGGLVLST E+E++RLKQ EEDRL+RL+IE K K  E  ++  F AH   V
Sbjct: 626 EPLYKDVTGSGGLVLSTREIEKLRLKQEEEDRLNRLLIENKIKDFEAGWIRKFDAHKDAV 685

Query: 242 SLLDSRLLEFGNEVKTLRESLENKKVAEISESISNE 272
           SLL  +L    NEVK L+E    K  A   E + NE
Sbjct: 686 SLLSDKLTNAENEVKLLKELCNRKVSAGTPECVPNE 719

The following BLAST results are available for this feature:

BLAST of CSPI03G19270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G19270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAE3_CUCSA	1.1e-125	97.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229380 PE=4 SV=1	[more]
A0A061DNE8_THECC	3.5e-60	51.26	Uncharacterized protein OS=Theobroma cacao GN=TCM_003618 PE=4 SV=1	[more]
A0A0D2T707_GOSRA	1.7e-59	50.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G124400 PE=4 SV=1	[more]
A0A0D2UT32_GOSRA	1.7e-59	50.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G124400 PE=4 SV=1	[more]
A0A0D2RLA6_GOSRA	1.7e-59	50.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G124400 PE=4 SV=1	[more]

BLAST of CSPI03G19270 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58110.1	1.8e-44	39.42	unknown protein	[more]
AT2G42370.1	7.7e-35	34.07	unknown protein	[more]

BLAST of CSPI03G19270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113041\|ref\|XP_008456415.1\|	9.5e-136	92.62	PREDICTED: DNA ligase 1 [Cucumis melo]	[more]
gi\|700202479\|gb\|KGN57612.1\|	1.5e-125	97.44	hypothetical protein Csa_3G229380 [Cucumis sativus]	[more]
gi\|590714849\|ref\|XP_007050028.1\|	5.0e-60	51.26	Uncharacterized protein TCM_003618 [Theobroma cacao]	[more]
gi\|823244312\|ref\|XP_012454814.1\|	2.5e-59	50.72	PREDICTED: uncharacterized protein LOC105776605 [Gossypium raimondii]	[more]
gi\|763804515\|gb\|KJB71453.1\|	2.5e-59	50.72	hypothetical protein B456_011G124400 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19270.1	CSPI03G19270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35120	FAMILY NOT NAMED	coord: 2..271 score: 1.4
None	No IPR available	PANTHER	PTHR35120:SF2	SUBFAMILY NOT NAMED	coord: 2..271 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G19270	CsaV3_3G019350	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G19270	Cucsa.032700	Cucumber (Gy14) v1	cgycpiB003

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G19270	Wax gourd	cpiwgoB283
CSPI03G19270	Cucurbita maxima (Rimu)	cmacpiB326
CSPI03G19270	Cucurbita maxima (Rimu)	cmacpiB705
CSPI03G19270	Cucurbita moschata (Rifu)	cmocpiB315
CSPI03G19270	Cucurbita moschata (Rifu)	cmocpiB698
CSPI03G19270	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G19270	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G19270	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G19270	Watermelon (97103) v1	cpiwmB242
CSPI03G19270	Cucurbita pepo (Zucchini)	cpecpiB208
CSPI03G19270	Cucurbita pepo (Zucchini)	cpecpiB388
CSPI03G19270	Bottle gourd (USVL1VR-Ls)	cpilsiB209
CSPI03G19270	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G19270	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G19270	Silver-seed gourd	carcpiB0047
CSPI03G19270	Silver-seed gourd	carcpiB0685
CSPI03G19270	Watermelon (97103) v2	cpiwmbB221