CSPI03G18220 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G18220
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 13869669 .. 13869923 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGGAAGTGGAAACAGTGGAAGAGGATTGAAAGAAGAGAAAGAGAAAAAGGGAGAAAAGAAAGAGAGAGGAGCGGTGAGTTGGTGGTAGAGATTGTGTTTTTATATGGAGCATTGGGGAATGGAAATGTTTGTGCTTTCGGTGTGTCCCGTTGGCGGGCAGAAATGCAACGGCACACACACCAAGCCGGACCCCCATGAAAGCAACCTCATAAGAAACCTAAATAAATGGCAATGCCATTTGATTTGA

mRNA sequence

ATGGCCGCCGGAAGTGGAAACAGTGGAAGAGGATTGAAAGAAGAGAAAGAGAAAAAGGGAGAAAAGAAAGAGAGAGGAGCGAAATGCAACGGCACACACACCAAGCCGGACCCCCATGAAAGCAACCTCATAAGAAACCTAAATAAATGGCAATGCCATTTGATTTGA

Coding sequence (CDS)

ATGGCCGCCGGAAGTGGAAACAGTGGAAGAGGATTGAAAGAAGAGAAAGAGAAAAAGGGAGAAAAGAAAGAGAGAGGAGCGAAATGCAACGGCACACACACCAAGCCGGACCCCCATGAAAGCAACCTCATAAGAAACCTAAATAAATGGCAATGCCATTTGATTTGA
Homology
[Close]
BLAST of CSPI03G18220 vs. TrEMBL
Match: A0A0A0L6E9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199670 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MAAGSGNSGRGLKEEKEKKGEKKERGAKCNGTHTKPDPHESNLIRNLNKWQCHLI 56
          MAAGSGNSGRGLKEEKEKKGEKKERGAKCNGTHTKPDPHESNLIRNLNKWQCHLI
Sbjct: 1  MAAGSGNSGRGLKEEKEKKGEKKERGAKCNGTHTKPDPHESNLIRNLNKWQCHLI 55

[Close]
BLAST of CSPI03G18220 vs. NCBI nr
Match: gi|700202372|gb|KGN57505.1| (hypothetical protein Csa_3G199670 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MAAGSGNSGRGLKEEKEKKGEKKERGAKCNGTHTKPDPHESNLIRNLNKWQCHLI 56
          MAAGSGNSGRGLKEEKEKKGEKKERGAKCNGTHTKPDPHESNLIRNLNKWQCHLI
Sbjct: 1  MAAGSGNSGRGLKEEKEKKGEKKERGAKCNGTHTKPDPHESNLIRNLNKWQCHLI 55

The following BLAST results are available for this feature:
BLAST of CSPI03G18220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G18220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6E9_CUCSA2.0e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199670 PE=4 SV=1[more]
BLAST of CSPI03G18220 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G18220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202372|gb|KGN57505.1|2.9e-23100.00hypothetical protein Csa_3G199670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G18220.1CSPI03G18220.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G18220Csa3G199670Cucumber (Chinese Long) v2cpicuB120
CSPI03G18220CsaV3_3G018280Cucumber (Chinese Long) v3cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G18220Wild cucumber (PI 183967)cpicpiB144
CSPI03G18220Cucumber (Gy14) v1cgycpiB333
CSPI03G18220Cucumber (Gy14) v1cgycpiB366
CSPI03G18220Cucurbita maxima (Rimu)cmacpiB125
CSPI03G18220Cucurbita maxima (Rimu)cmacpiB326
CSPI03G18220Cucurbita maxima (Rimu)cmacpiB520
CSPI03G18220Cucurbita maxima (Rimu)cmacpiB705
CSPI03G18220Cucurbita moschata (Rifu)cmocpiB120
CSPI03G18220Cucurbita moschata (Rifu)cmocpiB315
CSPI03G18220Cucurbita moschata (Rifu)cmocpiB510
CSPI03G18220Cucurbita moschata (Rifu)cmocpiB698
CSPI03G18220Cucumber (Chinese Long) v2cpicuB165
CSPI03G18220Melon (DHL92) v3.5.1cpimeB185
CSPI03G18220Melon (DHL92) v3.5.1cpimeB241
CSPI03G18220Watermelon (Charleston Gray)cpiwcgB217
CSPI03G18220Watermelon (Charleston Gray)cpiwcgB237
CSPI03G18220Watermelon (97103) v1cpiwmB242
CSPI03G18220Watermelon (97103) v1cpiwmB271
CSPI03G18220Cucurbita pepo (Zucchini)cpecpiB208
CSPI03G18220Cucurbita pepo (Zucchini)cpecpiB388
CSPI03G18220Cucurbita pepo (Zucchini)cpecpiB680
CSPI03G18220Bottle gourd (USVL1VR-Ls)cpilsiB188
CSPI03G18220Bottle gourd (USVL1VR-Ls)cpilsiB209
CSPI03G18220Melon (DHL92) v3.6.1cpimedB180
CSPI03G18220Melon (DHL92) v3.6.1cpimedB239
CSPI03G18220Cucumber (Gy14) v2cgybcpiB110
CSPI03G18220Cucumber (Gy14) v2cgybcpiB315
CSPI03G18220Silver-seed gourdcarcpiB0326
CSPI03G18220Silver-seed gourdcarcpiB0405
CSPI03G18220Cucumber (Chinese Long) v3cpicucB193
CSPI03G18220Watermelon (97103) v2cpiwmbB203
CSPI03G18220Watermelon (97103) v2cpiwmbB221
CSPI03G18220Wax gourdcpiwgoB283
CSPI03G18220Wax gourdcpiwgoB311