CSPI03G14500 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G14500
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptioncDNA, clone: J065205J11, full insert sequence
LocationChr3 : 10826830 .. 10827753 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTTTTCCTCTATTTCTTCTTCAACCCAAAAAGAGAGTTGAATTCAAAAACACAAGTCACTCTCAAACTGGAAGCAAAGGAAATGATTGAAGAACGCCAAGGTGGAGCTCCCCACGCCATTCTACTGGCCGTCGTTGTTGCCATCGTCATCGTCGTCCCTTTCCTACTCGGCGACCAAGGCGAGGCTCTCACCGATGCCATTTCCGATCTCCTAAGTCCCTTCGGTCTCCTCCTCCTCCCCATTCTCCTCCTTCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAACCTGACTCCATCCACCGCGTCACTGGATCCCCCGTCGGGGTTGCTCTCTTCCTCGTTCTCATTCTCTTTCTCCTCTATAACCGGATTTCCATCTTCGGCGGCGACGATGATTCCGGCGACTGAAATTTGTTTGTTACTTACTTACTTACTTAGATCTGTCTTTTCTGCCATTTGTTCTTCTTCCTCGAGTTTTTTCTGTGTATTGTTGTGTAAAGCTTGGCTTGATGAACCAAAGAGAAGTGGGTTGTAATTTACATGTATGCCCCTGAGAAACGGAGCATTCTCATTGGTGCAATTAAATATTTGAAATTTCGAAATTTCGAAATTGTCCTTGCTTTCCTTTTGTCCTTGTCATTGAGGTCATTTTCGTCATTTCGTACTCCCTGAAAAAGTAATTCTATCGTTCCACATTTTTTGTTTGACTGTCGGCGATCGCCCGGTGCTGCCCATTACTCCCTCTTCTTCTTTTTCTTCCTCAAAGGTGATAGTCTTTGTTTATGGAGTTTTTGAATCAGATATTTAGGCATGCAATTTTAAAAGAATAAATGATGGGAATCTAATAGTGTGAGTTCGATGAGATCTGAGTCTTTTTTATTATTGTTTA

mRNA sequence

ATGATTGAAGAACGCCAAGGTGGAGCTCCCCACGCCATTCTACTGGCCGTCGTTGTTGCCATCGTCATCGTCGTCCCTTTCCTACTCGGCGACCAAGGCGAGGCTCTCACCGATGCCATTTCCGATCTCCTAAGTCCCTTCGGTCTCCTCCTCCTCCCCATTCTCCTCCTTCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAACCTGACTCCATCCACCGCGTCACTGGATCCCCCGTCGGGGTTGCTCTCTTCCTCGTTCTCATTCTCTTTCTCCTCTATAACCGGATTTCCATCTTCGGCGGCGACGATGATTCCGGCGACTGA

Coding sequence (CDS)

ATGATTGAAGAACGCCAAGGTGGAGCTCCCCACGCCATTCTACTGGCCGTCGTTGTTGCCATCGTCATCGTCGTCCCTTTCCTACTCGGCGACCAAGGCGAGGCTCTCACCGATGCCATTTCCGATCTCCTAAGTCCCTTCGGTCTCCTCCTCCTCCCCATTCTCCTCCTTCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAACCTGACTCCATCCACCGCGTCACTGGATCCCCCGTCGGGGTTGCTCTCTTCCTCGTTCTCATTCTCTTTCTCCTCTATAACCGGATTTCCATCTTCGGCGGCGACGATGATTCCGGCGACTGA
Homology
[Close]
BLAST of CSPI03G14500 vs. TrEMBL
Match: A0A0A0L5U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154405 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.6e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1 

Query: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60
           MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI
Sbjct: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 120
           QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD
Sbjct: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119

[Close]
BLAST of CSPI03G14500 vs. TrEMBL
Match: A0A061EPD5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021224 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-46
Identity = 96/117 (82.05%), Postives = 110/117 (94.02%), Query Frame = 1 

Query: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60
           M+ ERQGGAPH ++LAVVV IV++ PFL GDQGEA+T+AI++LLSP GLLLLPI+LLLTI
Sbjct: 1   MLPERQGGAPHGVILAVVVGIVVLAPFLFGDQGEAITEAITELLSPVGLLLLPIILLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS 118
           QFLSSDRGSFVS+IFS+GEPDSIHRV+GSP GVALFLVLILFLLYNR+SIFGGDDDS
Sbjct: 61  QFLSSDRGSFVSSIFSTGEPDSIHRVSGSPFGVALFLVLILFLLYNRVSIFGGDDDS 117

[Close]
BLAST of CSPI03G14500 vs. TrEMBL
Match: A0A067JYF5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18888 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-46
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MIEER--QGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLL 60
           M EER  QGGAPH I+LAVVV  V++ PFLLGDQGEA+T+AI++LLSP GLLLLPI+LLL
Sbjct: 1   MFEERPQQGGAPHGIILAVVVCTVVLAPFLLGDQGEAITEAITELLSPVGLLLLPIILLL 60

Query: 61  TIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSG 120
           TIQFLSSDRGSFVS IFS+GEPD+IHRV+GSP GVALFLVLILFLLYNR+SIFGGDDDSG
Sbjct: 61  TIQFLSSDRGSFVSTIFSTGEPDTIHRVSGSPFGVALFLVLILFLLYNRMSIFGGDDDSG 120

[Close]
BLAST of CSPI03G14500 vs. TrEMBL
Match: W9RVE3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023507 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-46
Identity = 95/117 (81.20%), Postives = 112/117 (95.73%), Query Frame = 1 

Query: 3   EERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTIQF 62
           +ER GGAPH +LLAVVVAIV++VPFLLGD+GEA+T+AIS+LLSP GLLLLPI LLLTIQF
Sbjct: 4   QERHGGAPHGVLLAVVVAIVVLVPFLLGDRGEAVTEAISELLSPVGLLLLPIGLLLTIQF 63

Query: 63  LSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 120
           LSS+RGSFV+AIFS+GEPDSIHR++GS +GVALFL+L+LFLLYNR+SIFGGDDDSGD
Sbjct: 64  LSSERGSFVAAIFSTGEPDSIHRISGSSLGVALFLILLLFLLYNRVSIFGGDDDSGD 120

[Close]
BLAST of CSPI03G14500 vs. TrEMBL
Match: A0A0D2UV89_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G191100 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-45
Identity = 96/120 (80.00%), Postives = 111/120 (92.50%), Query Frame = 1 

Query: 1   MIEERQGG-APHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLT 60
           M+ ERQGG APH I+LAVVV IV++ PFL GDQGEA+T+AIS+LL+P GLLLLPI+LLLT
Sbjct: 1   MLPERQGGGAPHGIILAVVVGIVVLAPFLFGDQGEAITEAISELLTPLGLLLLPIILLLT 60

Query: 61  IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 120
           IQFLSSDRGSFVSA+FS+GEPD+IHRV+GSP GVALFL+LILFLLYNR+SIFGGDDDS D
Sbjct: 61  IQFLSSDRGSFVSAVFSTGEPDTIHRVSGSPFGVALFLLLILFLLYNRVSIFGGDDDSDD 120

[Close]
BLAST of CSPI03G14500 vs. TAIR10
Match: AT3G06890.1 (AT3G06890.1 unknown protein)

HSP 1 Score: 179.1 bits (453), Expect = 1.6e-45
Identity = 91/113 (80.53%), Postives = 104/113 (92.04%), Query Frame = 1 

Query: 7   GGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTIQFLSSD 66
           G APH I+LAVVVA+V++VPF +GD GEA+TDAI++LLSP GLLLLPI+LLLTIQFLSS+
Sbjct: 16  GSAPHGIILAVVVALVVLVPFFIGDSGEAITDAIAELLSPVGLLLLPIILLLTIQFLSSE 75

Query: 67  RGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 120
           RGSFVSAIFS+GEP+SIHRV+GSPVGVALFLVLILFLLY R SIFGGDD S D
Sbjct: 76  RGSFVSAIFSTGEPESIHRVSGSPVGVALFLVLILFLLYYRFSIFGGDDGSDD 128

[Close]
BLAST of CSPI03G14500 vs. NCBI nr
Match: gi|449432860|ref|XP_004134216.1| (PREDICTED: uncharacterized protein LOC101205160 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 9.5e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1 

Query: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60
           MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI
Sbjct: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 120
           QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD
Sbjct: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119

[Close]
BLAST of CSPI03G14500 vs. NCBI nr
Match: gi|1009163267|ref|XP_015899873.1| (PREDICTED: uncharacterized protein LOC107433134 [Ziziphus jujuba])

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-46
Identity = 100/125 (80.00%), Postives = 115/125 (92.00%), Query Frame = 1 

Query: 1   MIEERQGG------APHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPI 60
           MI ERQGG      APH +LLAVVVAIV+VVPFL+GDQGEA+T+AIS+LLSP GLLLLPI
Sbjct: 1   MIGERQGGYGGGNRAPHGVLLAVVVAIVVVVPFLVGDQGEAITEAISELLSPVGLLLLPI 60

Query: 61  LLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGD 120
           +LLLTIQFLSSDRGSFVS++FS+GEPD+IHRV+GSPVGVALFL+LILFLLYNR+SIFGGD
Sbjct: 61  ILLLTIQFLSSDRGSFVSSMFSTGEPDTIHRVSGSPVGVALFLILILFLLYNRVSIFGGD 120

[Close]
BLAST of CSPI03G14500 vs. NCBI nr
Match: gi|590661219|ref|XP_007035612.1| (Uncharacterized protein TCM_021224 [Theobroma cacao])

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-46
Identity = 96/117 (82.05%), Postives = 110/117 (94.02%), Query Frame = 1 

Query: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60
           M+ ERQGGAPH ++LAVVV IV++ PFL GDQGEA+T+AI++LLSP GLLLLPI+LLLTI
Sbjct: 1   MLPERQGGAPHGVILAVVVGIVVLAPFLFGDQGEAITEAITELLSPVGLLLLPIILLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS 118
           QFLSSDRGSFVS+IFS+GEPDSIHRV+GSP GVALFLVLILFLLYNR+SIFGGDDDS
Sbjct: 61  QFLSSDRGSFVSSIFSTGEPDSIHRVSGSPFGVALFLVLILFLLYNRVSIFGGDDDS 117

[Close]
BLAST of CSPI03G14500 vs. NCBI nr
Match: gi|802701504|ref|XP_012083955.1| (PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas])

HSP 1 Score: 192.2 bits (487), Expect = 5.2e-46
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MIEER--QGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLL 60
           M EER  QGGAPH I+LAVVV  V++ PFLLGDQGEA+T+AI++LLSP GLLLLPI+LLL
Sbjct: 1   MFEERPQQGGAPHGIILAVVVCTVVLAPFLLGDQGEAITEAITELLSPVGLLLLPIILLL 60

Query: 61  TIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSG 120
           TIQFLSSDRGSFVS IFS+GEPD+IHRV+GSP GVALFLVLILFLLYNR+SIFGGDDDSG
Sbjct: 61  TIQFLSSDRGSFVSTIFSTGEPDTIHRVSGSPFGVALFLVLILFLLYNRMSIFGGDDDSG 120

[Close]
BLAST of CSPI03G14500 vs. NCBI nr
Match: gi|703105502|ref|XP_010098261.1| (hypothetical protein L484_023507 [Morus notabilis])

HSP 1 Score: 192.2 bits (487), Expect = 5.2e-46
Identity = 95/117 (81.20%), Postives = 112/117 (95.73%), Query Frame = 1 

Query: 3   EERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTIQF 62
           +ER GGAPH +LLAVVVAIV++VPFLLGD+GEA+T+AIS+LLSP GLLLLPI LLLTIQF
Sbjct: 4   QERHGGAPHGVLLAVVVAIVVLVPFLLGDRGEAVTEAISELLSPVGLLLLPIGLLLTIQF 63

Query: 63  LSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 120
           LSS+RGSFV+AIFS+GEPDSIHR++GS +GVALFL+L+LFLLYNR+SIFGGDDDSGD
Sbjct: 64  LSSERGSFVAAIFSTGEPDSIHRISGSSLGVALFLILLLFLLYNRVSIFGGDDDSGD 120

The following BLAST results are available for this feature:
BLAST of CSPI03G14500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G14500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5U0_CUCSA6.6e-56100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154405 PE=4 SV=1[more]
A0A061EPD5_THECC1.6e-4682.05Uncharacterized protein OS=Theobroma cacao GN=TCM_021224 PE=4 SV=1[more]
A0A067JYF5_JATCU3.7e-4681.82Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18888 PE=4 SV=1[more]
W9RVE3_9ROSA3.7e-4681.20Uncharacterized protein OS=Morus notabilis GN=L484_023507 PE=4 SV=1[more]
A0A0D2UV89_GOSRA1.8e-4580.00Uncharacterized protein OS=Gossypium raimondii GN=B456_011G191100 PE=4 SV=1[more]
BLAST of CSPI03G14500 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06890.11.6e-4580.53 unknown protein[more]
BLAST of CSPI03G14500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432860|ref|XP_004134216.1|9.5e-56100.00PREDICTED: uncharacterized protein LOC101205160 [Cucumis sativus][more]
gi|1009163267|ref|XP_015899873.1|2.4e-4680.00PREDICTED: uncharacterized protein LOC107433134 [Ziziphus jujuba][more]
gi|590661219|ref|XP_007035612.1|2.4e-4682.05Uncharacterized protein TCM_021224 [Theobroma cacao][more]
gi|802701504|ref|XP_012083955.1|5.2e-4681.82PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas][more]
gi|703105502|ref|XP_010098261.1|5.2e-4681.20hypothetical protein L484_023507 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G14500.1CSPI03G14500.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33306FAMILY NOT NAMEDcoord: 2..117
score: 1.2
NoneNo IPR availablePANTHERPTHR33306:SF1SUBFAMILY NOT NAMEDcoord: 2..117
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G14500Cla021748Watermelon (97103) v1cpiwmB231
CSPI03G14500Cla97C05G087700Watermelon (97103) v2cpiwmbB209
CSPI03G14500Bhi01G000727Wax gourdcpiwgoB269
CSPI03G14500Cucsa.253010Cucumber (Gy14) v1cgycpiB383
CSPI03G14500CmaCh06G015050Cucurbita maxima (Rimu)cmacpiB826
CSPI03G14500CmaCh14G016160Cucurbita maxima (Rimu)cmacpiB255
CSPI03G14500CmoCh06G015030Cucurbita moschata (Rifu)cmocpiB814
CSPI03G14500Carg17337Silver-seed gourdcarcpiB0639
CSPI03G14500Carg20103Silver-seed gourdcarcpiB0874
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G14500Melon (DHL92) v3.6.1cpimedB165
CSPI03G14500Melon (DHL92) v3.6.1cpimedB185
CSPI03G14500Melon (DHL92) v3.6.1cpimedB224
CSPI03G14500Cucumber (Gy14) v2cgybcpiB024
CSPI03G14500Cucumber (Gy14) v2cgybcpiB110
CSPI03G14500Silver-seed gourdcarcpiB0075
CSPI03G14500Silver-seed gourdcarcpiB0738
CSPI03G14500Cucumber (Chinese Long) v3cpicucB132
CSPI03G14500Cucumber (Chinese Long) v3cpicucB144
CSPI03G14500Watermelon (97103) v2cpiwmbB239
CSPI03G14500Wax gourdcpiwgoB259
CSPI03G14500Wild cucumber (PI 183967)cpicpiB021
CSPI03G14500Cucurbita maxima (Rimu)cmacpiB359
CSPI03G14500Cucurbita maxima (Rimu)cmacpiB367
CSPI03G14500Cucurbita maxima (Rimu)cmacpiB903
CSPI03G14500Cucurbita moschata (Rifu)cmocpiB243
CSPI03G14500Cucurbita moschata (Rifu)cmocpiB352
CSPI03G14500Cucurbita moschata (Rifu)cmocpiB883
CSPI03G14500Cucumber (Chinese Long) v2cpicuB107
CSPI03G14500Cucumber (Chinese Long) v2cpicuB120
CSPI03G14500Melon (DHL92) v3.5.1cpimeB174
CSPI03G14500Melon (DHL92) v3.5.1cpimeB230
CSPI03G14500Watermelon (Charleston Gray)cpiwcgB226
CSPI03G14500Watermelon (Charleston Gray)cpiwcgB255
CSPI03G14500Watermelon (97103) v1cpiwmB281
CSPI03G14500Cucurbita pepo (Zucchini)cpecpiB133
CSPI03G14500Cucurbita pepo (Zucchini)cpecpiB140
CSPI03G14500Cucurbita pepo (Zucchini)cpecpiB307
CSPI03G14500Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G14500Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G14500Bottle gourd (USVL1VR-Ls)cpilsiB149
CSPI03G14500Bottle gourd (USVL1VR-Ls)cpilsiB198