CSPI03G05870 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G05870
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	cytochrome c biogenesis protein family
Location	Chr3 : 4983823 .. 4989940 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTTCTTTCTTTGTGTTTGTGGGCAGAAGGAAGGAAGAAATCTGGGATTGACAACTAACAACCAGAAAAATATCTCATTCAACATCCCACCACTCTTTCACTTCTCAACTAACTCTCCTCCCAACTCCACACTTTTTCCCTAATTTCCCACATGAGTTTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCTCTAAACACCCTAACACCCCAGGTATTACCTCTCATTTCGCTCTATAACTATGGGGGAGTTGCGAATATTTATAGTTTCAAACAAGTCACCCAAACACTATTTGAAGATGTACACAATTTTTGGGTATTCAATGGTATATCCAAGGAGAAAATTTATGGTTTCATGAACTCTAGGGCTTGTTTTCATCATTATGTATTCAACTCTCTTTTATACACAGGCTCACTGGTTTCTTTAGGTAAACATGTCATGCCCATGAAATTTCTTGGGACACAATCCGTAGCTGATGATCAATGTAAACATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGGTAAGGCTTTCGCACGAACACTTTTTAATTTCACATGTTTTGAACACTTGTGTTAATGCAATAGATGTGTTACACATTCATAGAACACTTGTTGAGAAGACCAAAGAGATGCATATATATAAAGATAATAATAGATTTTTGTTACCAGTAGTATCACCGTTAATTAAATTCTGTGATTATGGTTATTATTTGTATGTCAAATACATCAAACTAATTTTTTAACGGTATAAATGCATCAACTCATTTATTTTGAATTTTCTTCTATTTTAAAAATGATACACACGCACATATATGTTTTTTTTTTAAATGTATATTTTAATAATTGTGTCCTTTCTTTGTCATGTCCTAAATTTTTAGAAGATGGCTCGTCACTGTGTTTGTGGCACGTCTCGTATCCATAGTTATGCTTCTTAGGGCTTATGCTCTCTTCCTGAGGTGGAAGATGGTTCTACTTCAATCTTGTTATAATAATTTATTCACGTTCTTTTTCAATTCATTGTTTGTTCATTATTTAAGTATGATTGGTAATTTCATAAGTACCTGTAAGCAATCAGATGTATAGGATCATAGGCAACCTCTTATTTTCCTTTTAAATCCTGCTTTTCACTCCAAGTAAAATAGGCTGTACTTTACCTGCTTCAGTGCCGCTGTGGTTTAGCATGAATTTTCTTAATTTTATTTCGTTTTCAATATTCCAGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGTAAGAGTTGTCGTGTATTGTGTTTTCTAAAGCCACATGAATCTATATTCTTTTGAGACTTTAATTCCCTAAAATCCATTTATTTAACTACTTTTAAAGATTTTCTATATTACTTTTCACCAGTTCCTTTTATAATCTTGATGAAATTTATATGTATTTCTATTTTCCTTTGGACATATAGTCGTGAGAGGTTTCTTTATTTGTAAGTGAGTTTCAATTGTTTATCAGTTTCAATTGTTTATCCTTTATGATGACCAAGTTTTTTATTTTTCATTTATTTAGTTGTTTCACTACTTTTTGGGGTGAGGTATGGGTTTGCCAGATAAGAATGGTCAACTCATTATAACTTCAATAGAAAACAAAACTTGGTAATAGGACTGCTCTTTAGCATTACTTTCCAGCTTTGTTTGCTTGGTTAAGATGTTGGTCTCTATCAGTTGGATATCATGGTAAATGAATTAGTCTGCGTATATGTTATTGGTGTATAACTGTAAATTATATCAGGAACTAGAATTATTTTCCTTCAAGTCAGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTGGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGGTCCAGTCTTGTTTTTCTGCCATTTACATTTCATGTCTTTTAAGGATTTAAATTTGATAGTAAACGGCTTTTTTTTCTATTTCTCTGCCCTTGATCACTTATTCCTTTTTACAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGTAAGCATCTCATACATATATTCTTGGAATCTTGGTATGTTATTTTCCTGTCATATGTTGATGTTGTGATCCAATGGAACTTTGTAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTAAATTACTTTCTACACGTGTTCCAATTTTCTTCTCTTTGCTCTTGTGATTGTGGTATCAAATTATAGAAATCTCCAAATCAATTGAGCGCTAGATGTTTGATGATACATTCAAGATCCTAGGCTCAACCCTCTAGGTTGAAAGTTTAGGCTCTGCTTGATAACCATTTGATTTTGGTTTTGGTTTTTTGTTTTTTAAATATAAGATTATAAACACTACTTCCACCCATATATTTCTATATTCTATTATCACTTTCTACTAACATTTACAAAAAAACAAGCCACATTTTGAAAATTAGAAAAAAAAAGGTTTTTGTTATTAAAATTTGACTAAGAATTCAAGTGTTTATTTTACAAAAGTTAACCATAATTGAAATTTTTTATAGAAAACGAGTGAAGATTTTAAATGCAGAAAACCAAAAACCAAAATCGTTATCAAGCAGCGCCTTAATAGTTTATAACACTGGTTGTCCTTAATAGTTTATAACATTGGTTGTCATCTGTTAGTTGGGCTTGGGGTCGACAAAACGTTAGTGAGATAAGTAGGGAAGGTCGTGAATCTATTGTAAAGAGTGGGGCCCTTCAACACCCTGGTAATAGAAAAATAATAATAATAAACCAGGACTTGAAAGAAACTATTCAATGGTTCTTCGATGTCAGAGTTTTCATATCCTTTGCCTGTCCAGATTTATCATCATTGTTACTATATTGAACTTGAGAGCATTTTGTTAGGCCACCGATTATATTTCTATACCAAAGGAGGGGGGTAAAGAGGGCATGGCTTATGTAATTGGCAGTGGTGGCTTCAACATCCAATAGTAATAGGTGGTCCCCACAGTTAGTTAGAGGAGGAGGAGAGAGAGTATTTGTGTAGGAAGGAAAGACATTGGAAACACTTGATTTTCGATTGAGTCATCTTCTTGAGAGTGAAGAGGGAATCCTTGCTTCTGTGAGAGGCTGGATGTTGTGATTTCCCTTGGAGCAATCATTTCCATTCGAATAAGACTTCCTTATATCAGTACCTATCACATTTCTATTGAAATATATGCATCAATGTGAGCGGATGAGTAAGGGAACAGTTATAGAATAATTCTAAGGGCACAGTGGTAATTAGCTTTTGGTGCTCTGGTTATGAGGGAAGTTGGACACCTTAGGGGAGATCATTTTGATAAGTCCGGACTCAGTGTATTTGTTGTAGGAGAGAGATAACAAAAGGCTATTGATATTGTAATTTCTTAATTGATATTGCAATGTAGTAATCCTTAGTGTTTTTCACATATTTTCTGTGTTTGGAATCCCGATAGAGTCCTTATACTCTGATGGTTGGGGTGAATATGCATATATGTGAGATGGTTTTCATAGAAATGGTTGAAAACTGTGCTGATGGTCCTTGCTTTGAGAAAGGAAGTTAAATGGAATTTGATCTCTTCATATTTTCAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGGTATGATTAGATATTCGAAGGGTACTTTGGTATATCATTACCTATTATTCATAATCATCTCTTTTGTGGAAAGAATAATTAAATTTGTCTCATTATAAATGTTTCACTTTGTTGTATTTGTTAGTGGGTTGCAGAACCTGATACCCAAGTACTCGACTGCTTTTTTCACAATGTCGTTTTGGAATAGTCTTCTGATGGATTGATTCTATAATTTGTCACGAAATGCAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGTAATTGGCCTCTCCATTTCTTTTGGCTACTGGTTACTTACCTACCTGGATCCCCTAACAAGATTTTAAATCTGATGTATTAGGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGTGCCCAAAGTGTTTCCTACACTGATTCGACTTTGATCTTAGTTTCAATAGATTGAATTGTATGATTATTAAAGAATCCTTGAAATTAAAAAATGTCATGTATATATGATATTGACCGGTTGTGACTTTGATTGTGTTCTCTCTTAAACCTAGCCTTGGAGCTTTGAAACCTTTTTAGTGAATCAGTAGGGCGGATAACCAACCTAATTGTGGAAGAAGGATGAAATAATCCATTTCCTTAGTGTTCCCTGTTAATGACTACTCTCTTTTATAACAGGATCCCATCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGGTAATATGGTTATACTAGGAAGGAGAACTTACCTGCATGTAGATATTGTCTGAATATACTATAAGTTTATCATGTGACTTTTTAAAAGTTTTCCCTTTTGTTACTTTTGATGCTCTAATTCATTGGAGATTGCTGTAGTCTCGGGTTTTATTATCTATATGACTCTTGTATGCCTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGGTAATTCCTCTTAAACTCATCTTTACTTAATTAAGATTACAGATCAAATGTTCAATTTCAAAAGTTTGGAACCACTATGAGTTGACTTAGAGTCTTAATAAACTACATGAGTTTATTCCATTCCATGGCGTCCATTTACCTAAGAATTAATTTCGTACGAGTTTTCTGTGTCCATTTACCTAAGAATTAATTTCATACGAGTTTTCTGAGTTAGATAGATTGTTTCATGAGATTAGTCAAGGATCTCAAGGTGCAGATAAGTTGGCCTCGTGAAGATAACAAAAGATTCAAAAGTTTGGTTTTGAACACAGGAAAAAATAAAGATGTTCCAACTTCAAAACAATATCAGTTTTATTTTCTAAAAATGCATATAAAAGAAATGCACCTCTTCTATAAAGTTATTCTAAACTCACTTAAAAGAAAAAATTCCCCTAATATAGGAGTGTTGCAACGAAAACACATCCAAGAAAAAGTCAGGTTTGCTGGGAAAAAACGGTGCATAAGAACTAAATAAATCTTGCAAACTAATTACACATTAGATGCAATAATAATGTTTGAATTCCAAAGTAAGTAAGATGAAGCAACTAAAATCTATAAAGGGACGTCTGTTTGATAACCGCCACTCTGACGGCTATTAGAATCAAATAAAATACAAAACTGAATTATCTTTTCTTAAATATAAACAAAATTCATCGAATGGTAGAAGTATTTAATCTAACTATTAATCCCATAAAAAATTCACCCTTTTCATCGTATCATAAAATATGCAACAAGATTTCACATTAAAGTATGGATTAAGTTTTTGAGTTGATATGTTTTGGTAGATGAAATATGATATGTTTTGAAGTGGGTTTTGTTTGTTGTTTGATGTTTGATGTATATGCAGTGGCGCATTACTATTGGGTGGAGGTCTATATACGTTCCTGGACAGATTATTTCCAGTCACAATGGCAATGTAAGATTGATTTATTAATTATGTAAAGAAATATCTATATATATATTCAAAGTCCTTAGATAAAATGATAAGATTATGTTGCTCTCTCATCTCATTCAATGGTCCATATTTTTCTGTGTTTCTTTTGGCCTCACTATCTTTAATTTCATGTGGATAAAG

mRNA sequence

ATGAGTTTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCTCTAAACACCCTAACACCCCAGGCTCACTGGTTTCTTTAGGTAAACATGTCATGCCCATGAAATTTCTTGGGACACAATCCGTAGCTGATGATCAATGTAAACATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTGGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCATCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCATTACTATTGGGTGGAGGTCTATATACGTTCCTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

Coding sequence (CDS)

ATGAGTTTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCTCTAAACACCCTAACACCCCAGGCTCACTGGTTTCTTTAGGTAAACATGTCATGCCCATGAAATTTCTTGGGACACAATCCGTAGCTGATGATCAATGTAAACATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTGGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCATCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCATTACTATTGGGTGGAGGTCTATATACGTTCCTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

Homology

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BLAST of CSPI03G05870 vs. Swiss-Prot
Match: CCDA2_ORYSJ (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica GN=CCDA2 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.3e-120
Identity = 242/345 (70.14%), Postives = 274/345 (79.42%), Query Frame = 1


Query: 19  STSKHPNTPGSLVSL----GKHVMPMKFLGTQSVADDQCKHIELVKNRNSRNYFQAMAFV 78
           STS  P T G LV +    G  V      G +  A  +C  +            Q    +
Sbjct: 27  STSSSPGT-GVLVGVPRERGSSVSKAAIRGARLEAAARCSLVR-----------QRPMLL 86

Query: 79  NAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQL 138
             ++  S +A  AA A  +     G++ +  LAD  +GDWFG +LYSAGQQAN AVQDQL
Sbjct: 87  ATVAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQL 146

Query: 139 SALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLAT 198
           SALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLAT
Sbjct: 147 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLAT 206

Query: 199 TLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAA 258
           TLA+LG+ ASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF+++DPR+AAA
Sbjct: 207 TLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAA 266

Query: 259 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLL 318
           N PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPI+GGSLLLTYTTGYV PLL+
Sbjct: 267 NLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLI 326

Query: 319 AASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVT 360
           AASFAGALQSLLSFR++S+WINPISGA LLGGG+YT LDRLFP T
Sbjct: 327 AASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358

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BLAST of CSPI03G05870 vs. Swiss-Prot
Match: CCDA1_ORYSJ (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica GN=CCDA1 PE=2 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.3e-120
Identity = 242/351 (68.95%), Postives = 278/351 (79.20%), Query Frame = 1


Query: 13  INSIQISTSKHPNTPGSLVSL----GKHVMPMKFLGTQSVADDQCKHIELVKNRNSRNYF 72
           +++ + STS  P T G LV +    G  V      G +  A  +C  +            
Sbjct: 26  VSASKPSTSSSPGT-GVLVGVPRERGSSVSKAAIRGARLEAAARCSLVR----------- 85

Query: 73  QAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANV 132
           Q    +  ++  S +A  AA A  +     G++ +  LAD  +GDWFG +LYSAGQQAN 
Sbjct: 86  QRPMLLATVAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSVGDWFGNLLYSAGQQANE 145

Query: 133 AVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAF 192
           AVQDQLSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAF
Sbjct: 146 AVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAF 205

Query: 193 SLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFD 252
           SLGLATTLA+LG+ ASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF+++D
Sbjct: 206 SLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYD 265

Query: 253 PRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGY 312
           PR+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPI+GGSLLLTYTTGY
Sbjct: 266 PRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGY 325

Query: 313 VVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVT 360
           V PLL+AASFAGALQSLLSFR++S+WINPISGA LLGGG+YT LDRLFP T
Sbjct: 326 VAPLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363

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BLAST of CSPI03G05870 vs. Swiss-Prot
Match: CCDA_ARATH (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana GN=CCDA PE=1 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-119
Identity = 240/323 (74.30%), Postives = 270/323 (83.59%), Query Frame = 1


Query: 54  KHIELVKNRN------------SRNYFQAMAFVNAISATSFLAVDAAKAETLKHM-WEGA 113
           KH EL + R+            S++   AM   + +   + + + +AKA  LK +  + A
Sbjct: 33  KHCELERERSLVSDAVSLERLESKSIKLAM-LASGLGVANLVTLSSAKAADLKMIVLDQA 92

Query: 114 ASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLS 173
            S+Y LA+G +GD  G  LYSA QQAN AVQDQLSALS TSLAVIFGAG VTSLSPCTLS
Sbjct: 93  TSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALSVTSLAVIFGAGLVTSLSPCTLS 152

Query: 174 VLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLA 233
           VLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLATTLALLGI ASFAGKAYGQIGQGLP+A
Sbjct: 153 VLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALLGIVASFAGKAYGQIGQGLPVA 212

Query: 234 ASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPV 293
           ASGLA++MGLNLLEIIELQLPSFFNNFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPV
Sbjct: 213 ASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPV 272

Query: 294 LATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISG 353
           LATLLGYVATS+DP+IGGSLLLTYTTGYV PL++AASFAGALQSLLS RK S+WINPISG
Sbjct: 273 LATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISG 332

Query: 354 ALLLGGGLYTFLDRLFP-VTMAM 363
           ALLLGGGLYTFLDRLFP  TM M
Sbjct: 333 ALLLGGGLYTFLDRLFPAATMVM 354

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BLAST of CSPI03G05870 vs. Swiss-Prot
Match: YCXN_PORPU (Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.6e-24
Identity = 71/238 (29.83%), Postives = 126/238 (52.94%), Query Frame = 1


Query: 118 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 177
           +LY++    N     QL+ ++  S + +F +G  TS SPC +S+LP+ + YI   G   S
Sbjct: 6   LLYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLS 65

Query: 178 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 237
           + + + N   F LG  ++   LG+ A+   K Y Q+  G+P+ ++ + + MG +LL I+ 
Sbjct: 66  QIDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIVP 125

Query: 238 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIG 297
           L      NN + R    N   +++ YL+G+   LA S CSTP+  TLL +V ++ +  IG
Sbjct: 126 LST----NNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIG 185

Query: 298 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRL 356
              +L Y+ GY+ P+++ + F+    +  S    ++   P SG +LL  G ++    +
Sbjct: 186 LIFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237

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BLAST of CSPI03G05870 vs. Swiss-Prot
Match: YCXN_PYRYE (Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.3e-19
Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 1


Query: 119 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSK 178
           +Y++    N     QL+ L+ TS + IF +G  TSLSPC +S+LP+ + YI       + 
Sbjct: 7   VYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLNP 66

Query: 179 AEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 238
                N   F LG  ++   LGI A+   K Y Q   G+P  ++ + + MGLNLL I+ +
Sbjct: 67  INKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVHI 126

Query: 239 QLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGG 298
             P F           N   + + YL+G+   +A S CSTP+  TLL ++ +++    G 
Sbjct: 127 NSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTGL 186

Query: 299 SLLLTYTTGYVVPLLLAASFAGALQSL 326
             +L Y+ GY+ P+++ + F+ +   L
Sbjct: 187 IFILIYSIGYIFPIIIGSIFSTSFLKL 207

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BLAST of CSPI03G05870 vs. TrEMBL
Match: A0A0A0L5A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099700 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 2.1e-193
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1


Query: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60
           MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL
Sbjct: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300
           PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL
Sbjct: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360

Query: 361 AM 363
           AM
Sbjct: 361 AM 362

[Close]

BLAST of CSPI03G05870 vs. TrEMBL
Match: E0CSS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03530 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 7.0e-133
Identity = 262/332 (78.92%), Postives = 287/332 (86.45%), Query Frame = 1


Query: 34  GKHVMPMKFLGTQSVADDQCKHI-ELVKNRNSRNYF-QAMAFVNAISATSFLAV-DAAKA 93
           GK+ +P++     ++A+D  + I  L K   S ++  +  A  +A +A +F A  D AKA
Sbjct: 27  GKYKVPVRVPKRSAMAEDLTQDIVSLSKTEKSGSFLIKTAATSSAFAAANFFATTDMAKA 86

Query: 94  ETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGF 153
             +K + EGA SVYTLADG +GDWFGG LYSAGQQAN AVQDQLSALSFTSLAVIFGAG 
Sbjct: 87  ANIKDILEGATSVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTSLAVIFGAGL 146

Query: 154 VTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAY 213
           VTSLSPCTLSVLPLTLGYIGAFGSGK +AEV+GNSVAFSLGLATTLA+LG+ ASFAGKAY
Sbjct: 147 VTSLSPCTLSVLPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGVAASFAGKAY 206

Query: 214 GQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFA 273
           GQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAAN PSSVQAYLAGLTFA
Sbjct: 207 GQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQAYLAGLTFA 266

Query: 274 LAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRK 333
           LAASPCSTPVLATLLGYVATSKDP+IGGSLLLTYTTGYV PLLLAASFAGALQSLLSFRK
Sbjct: 267 LAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRK 326

Query: 334 FSSWINPISGALLLGGGLYTFLDRLFPVTMAM 363
           FS+WINP SGALLLGGG+YT LDRLFP +M M
Sbjct: 327 FSAWINPTSGALLLGGGIYTLLDRLFPTSMVM 358

[Close]

BLAST of CSPI03G05870 vs. TrEMBL
Match: A0A067L4B6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00701 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.9e-130
Identity = 257/329 (78.12%), Postives = 279/329 (84.80%), Query Frame = 1


Query: 34  GKHVMPMKFLGTQSVADDQCKHIELVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETL 93
           G+   P+K     S  D     I      +S    +     ++I+  + +A+DAAKA T 
Sbjct: 21  GREKFPIKISDKSSTND-----IVSFSKNDSNCSSRINTIASSIAVANLVAIDAAKAVTT 80

Query: 94  KHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTS 153
             + E AAS+Y LADG  GDWFG  LYSAGQQAN AVQDQLSALSFTSLAVIFGAG VTS
Sbjct: 81  SKLLEEAASIYALADGSTGDWFGTFLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTS 140

Query: 154 LSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQI 213
           LSPCTLSVLPLTLGYIGAFGSGKS+AEV+ +S+AFSLGLATTLALLGI ASFAGKAYGQI
Sbjct: 141 LSPCTLSVLPLTLGYIGAFGSGKSRAEVIADSIAFSLGLATTLALLGIAASFAGKAYGQI 200

Query: 214 GQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAA 273
           GQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPR+AAANFPSSVQAYLAGLTFALAA
Sbjct: 201 GQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAA 260

Query: 274 SPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSS 333
           SPCSTPVLATLLGYVATSKDP++GGSLLLTYTTGYV PLLLAASFAGALQSLLSFRKFS+
Sbjct: 261 SPCSTPVLATLLGYVATSKDPLVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSA 320

Query: 334 WINPISGALLLGGGLYTFLDRLFPVTMAM 363
           WINP+SGALLLGGG+YTFLDRLFP TMAM
Sbjct: 321 WINPMSGALLLGGGVYTFLDRLFPPTMAM 344

[Close]

BLAST of CSPI03G05870 vs. TrEMBL
Match: U5GWN2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41750g PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 4.2e-130
Identity = 249/289 (86.16%), Postives = 272/289 (94.12%), Query Frame = 1


Query: 74  VNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQ 133
           +++I+ ++ +A+D AKA TL  + E AASVYTLADG +GDWFGG LYS+GQQAN AVQDQ
Sbjct: 30  ISSIAVSNLVAIDMAKAVTLDKVLE-AASVYTLADGSIGDWFGGFLYSSGQQANEAVQDQ 89

Query: 134 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 193
           LSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+AE+VG+S+AF+LGLA
Sbjct: 90  LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEIVGDSIAFALGLA 149

Query: 194 TTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAA 253
           TTLALLGI ASFAGK YGQIGQGLPLAASGLAVIMGLNLLE+IELQLPSFFNNFDPR+AA
Sbjct: 150 TTLALLGIAASFAGKTYGQIGQGLPLAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAA 209

Query: 254 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLL 313
           ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA SKDP++GGSLLLTYTTGYV PLL
Sbjct: 210 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLL 269

Query: 314 LAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 363
           LAASFAGALQSLLSFRKFS+WINP+SGALLLGGG+YTFLDRLFP TMAM
Sbjct: 270 LAASFAGALQSLLSFRKFSAWINPMSGALLLGGGVYTFLDRLFPPTMAM 317

[Close]

BLAST of CSPI03G05870 vs. TrEMBL
Match: A0A0D2U2J8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G166200 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 7.2e-130
Identity = 263/351 (74.93%), Postives = 290/351 (82.62%), Query Frame = 1


Query: 14  NSIQISTSK-HPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVKNRNSRNYFQAMA 73
           N  +IS+ K HP T       GK+ M    +   +   D C   E +K           A
Sbjct: 15  NFFKISSLKNHPRT-----CYGKYTMT---INKPTGGQDLCNDFESLK---------FTA 74

Query: 74  FVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQD 133
            VN I+  + +A+D+AKA +  ++ EGAAS+YTLADG  GDWFGG+LYSAGQQAN AVQ 
Sbjct: 75  LVNTIAVANLVAIDSAKALSEDNILEGAASLYTLADGSSGDWFGGLLYSAGQQANEAVQG 134

Query: 134 QLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGL 193
           QLSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK + EV+ NS+AFSLGL
Sbjct: 135 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRTEVIANSMAFSLGL 194

Query: 194 ATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSA 253
           ATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLE+IELQLPSFF+NFDPR+A
Sbjct: 195 ATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEVIELQLPSFFSNFDPRTA 254

Query: 254 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPL 313
           AAN PS VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGGSLLLTYTTGYV PL
Sbjct: 255 AANLPSGVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPL 314

Query: 314 LLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP-VTMAM 363
           LLAASFAGALQ+LLSFRKFS+WINP+SGALLLGGG+YTFLDRLFP  TMAM
Sbjct: 315 LLAASFAGALQNLLSFRKFSAWINPVSGALLLGGGVYTFLDRLFPATTMAM 348

[Close]

BLAST of CSPI03G05870 vs. TAIR10
Match: AT5G54290.2 (AT5G54290.2 cytochrome c biogenesis protein family)

HSP 1 Score: 430.6 bits (1106), Expect = 9.3e-121
Identity = 240/323 (74.30%), Postives = 270/323 (83.59%), Query Frame = 1


Query: 54  KHIELVKNRN------------SRNYFQAMAFVNAISATSFLAVDAAKAETLKHM-WEGA 113
           KH EL + R+            S++   AM   + +   + + + +AKA  LK +  + A
Sbjct: 34  KHCELERERSLVSDAVSLERLESKSIKLAM-LASGLGVANLVTLSSAKAADLKMIVLDQA 93

Query: 114 ASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLS 173
            S+Y LA+G +GD  G  LYSA QQAN AVQDQLSALS TSLAVIFGAG VTSLSPCTLS
Sbjct: 94  TSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALSVTSLAVIFGAGLVTSLSPCTLS 153

Query: 174 VLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLA 233
           VLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLATTLALLGI ASFAGKAYGQIGQGLP+A
Sbjct: 154 VLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALLGIVASFAGKAYGQIGQGLPVA 213

Query: 234 ASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPV 293
           ASGLA++MGLNLLEIIELQLPSFFNNFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPV
Sbjct: 214 ASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPV 273

Query: 294 LATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISG 353
           LATLLGYVATS+DP+IGGSLLLTYTTGYV PL++AASFAGALQSLLS RK S+WINPISG
Sbjct: 274 LATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISG 333

Query: 354 ALLLGGGLYTFLDRLFP-VTMAM 363
           ALLLGGGLYTFLDRLFP  TM M
Sbjct: 334 ALLLGGGLYTFLDRLFPAATMVM 355

[Close]

BLAST of CSPI03G05870 vs. NCBI nr
Match: gi|449463144|ref|XP_004149294.1| (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis sativus])

HSP 1 Score: 682.9 bits (1761), Expect = 3.0e-193
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1


Query: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60
           MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL
Sbjct: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300
           PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL
Sbjct: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360

Query: 361 AM 363
           AM
Sbjct: 361 AM 362

[Close]

BLAST of CSPI03G05870 vs. NCBI nr
Match: gi|778676264|ref|XP_011650559.1| (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Cucumis sativus])

HSP 1 Score: 666.8 bits (1719), Expect = 2.2e-188
Identity = 356/362 (98.34%), Postives = 356/362 (98.34%), Query Frame = 1


Query: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60
           MSFLVSNSGAFIINSIQISTSKHPNTPG      KHVMPMKFLGTQSVADDQCKHIELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPG------KHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL
Sbjct: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300
           PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL
Sbjct: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 356

Query: 361 AM 363
           AM
Sbjct: 361 AM 356

[Close]

BLAST of CSPI03G05870 vs. NCBI nr
Match: gi|659102736|ref|XP_008452287.1| (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo])

HSP 1 Score: 652.9 bits (1683), Expect = 3.3e-184
Identity = 348/365 (95.34%), Postives = 356/365 (97.53%), Query Frame = 1


Query: 1   MSFLVSNSGAFIINSIQISTSK---HPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIE 60
           MS L+SNSG FIINSI+ISTSK   HPNTPGSLVSLGK+VMP+KFLG QS ADDQC+ IE
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGSLVSLGKYVMPIKFLGRQSAADDQCEDIE 60

Query: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120
           LV+NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG
Sbjct: 61  LVENRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
           ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIG 300
           LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFP 360

Query: 361 VTMAM 363
           VTMAM
Sbjct: 361 VTMAM 365

[Close]

BLAST of CSPI03G05870 vs. NCBI nr
Match: gi|659102738|ref|XP_008452288.1| (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Cucumis melo])

HSP 1 Score: 636.7 bits (1641), Expect = 2.4e-179
Identity = 342/365 (93.70%), Postives = 350/365 (95.89%), Query Frame = 1


Query: 1   MSFLVSNSGAFIINSIQISTSK---HPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIE 60
           MS L+SNSG FIINSI+ISTSK   HPNTPG      K+VMP+KFLG QS ADDQC+ IE
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPG------KYVMPIKFLGRQSAADDQCEDIE 60

Query: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120
           LV+NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG
Sbjct: 61  LVENRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
           ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIG 300
           LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFP 359

Query: 361 VTMAM 363
           VTMAM
Sbjct: 361 VTMAM 359

[Close]

BLAST of CSPI03G05870 vs. NCBI nr
Match: gi|645240655|ref|XP_008226705.1| (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Prunus mume])

HSP 1 Score: 490.7 bits (1262), Expect = 2.2e-135
Identity = 267/364 (73.35%), Postives = 305/364 (83.79%), Query Frame = 1


Query: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLG--TQSVADDQCKHIEL 60
           M+  +++ G++ INS  IS+ K     G   S GK+++P++ L   + S   D  + +  
Sbjct: 1   MNLAINHCGSYGINSFTISSCKG----GRKSSHGKYMVPIRMLRGPSTSTPQDLSQDLAS 60

Query: 61  VKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGI 120
           +   ++ + F     VN+++  + +  D AKA +     EGA S YTLADGG G+WFGG 
Sbjct: 61  LAKSDTSSSFPFKTVVNSMAVANLVFADMAKAVSTGKFLEGAVSFYTLADGGPGEWFGGF 120

Query: 121 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSK 180
           L+SAGQ+AN AVQDQLSALSF+SLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKSK
Sbjct: 121 LFSAGQEANEAVQDQLSALSFSSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSK 180

Query: 181 AEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 240
           AEVVGNS+AFSLGLATTLALLGIGASFAGKAYGQ GQGLPLAASGLA++MGLNLLE+IEL
Sbjct: 181 AEVVGNSIAFSLGLATTLALLGIGASFAGKAYGQTGQGLPLAASGLAIVMGLNLLEVIEL 240

Query: 241 QLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGG 300
           QLPSFFNNFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK+P+IGG
Sbjct: 241 QLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKNPVIGG 300

Query: 301 SLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPV 360
           SLLLTYTTGYV PLLLAASFAGALQSLLSFRKFS+WINPISGALLLGGG+YTFLDRLFPV
Sbjct: 301 SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPISGALLLGGGVYTFLDRLFPV 360

Query: 361 TMAM 363
           TMAM
Sbjct: 361 TMAM 360

The following BLAST results are available for this feature:

BLAST of CSPI03G05870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCDA2_ORYSJ	3.3e-120	70.14	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa s...	[more]
CCDA1_ORYSJ	3.3e-120	68.95	Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa s...	[more]
CCDA_ARATH	1.7e-119	74.30	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thal...	[more]
YCXN_PORPU	2.6e-24	29.83	Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea PE=...	[more]
YCXN_PYRYE	3.3e-19	30.92	Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis PE=...	[more]

BLAST of CSPI03G05870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5A0_CUCSA	2.1e-193	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099700 PE=4 SV=1	[more]
E0CSS2_VITVI	7.0e-133	78.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03530 PE=4 SV=...	[more]
A0A067L4B6_JATCU	1.9e-130	78.12	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00701 PE=4 SV=1	[more]
U5GWN2_POPTR	4.2e-130	86.16	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41750g PE=4 SV=1	[more]
A0A0D2U2J8_GOSRA	7.2e-130	74.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G166200 PE=4 SV=1	[more]

BLAST of CSPI03G05870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54290.2	9.3e-121	74.30	cytochrome c biogenesis protein family	[more]

BLAST of CSPI03G05870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463144\|ref\|XP_004149294.1\|	3.0e-193	100.00	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
gi\|778676264\|ref\|XP_011650559.1\|	2.2e-188	98.34	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
gi\|659102736\|ref\|XP_008452287.1\|	3.3e-184	95.34	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
gi\|659102738\|ref\|XP_008452288.1\|	2.4e-179	93.70	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
gi\|645240655\|ref\|XP_008226705.1\|	2.2e-135	73.35	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Prunus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003834	Cyt_c_assmbl_TM_dom
IPR003834	Cyt_c_assmbl_TM_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0017004	cytochrome complex assembly
GO:0055114	oxidation-reduction process
GO:0017004	cytochrome complex assembly
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0016020	membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G05870.1	CSPI03G05870.1	mRNA
CSPI03G05870.2	CSPI03G05870.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003834	Cytochrome C biogenesis protein, transmembrane domain	PFAM	PF02683	DsbD	coord: 145..323 score: 2.8
None	No IPR available	PANTHER	PTHR31272	FAMILY NOT NAMED	coord: 56..323 score: 2.7E
None	No IPR available	PANTHER	PTHR31272:SF6	CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN	coord: 56..323 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G05870	Cla011749	Watermelon (97103) v1	cpiwmB224
CSPI03G05870	Csa3G099700	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G05870	MELO3C016553	Melon (DHL92) v3.5.1	cpimeB242
CSPI03G05870	ClCG10G006520	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G05870	Lsi05G006880	Bottle gourd (USVL1VR-Ls)	cpilsiB197
CSPI03G05870	MELO3C016553.2	Melon (DHL92) v3.6.1	cpimedB226
CSPI03G05870	CsaV3_3G005970	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G05870	Cla97C10G190460	Watermelon (97103) v2	cpiwmbB184
CSPI03G05870	Cucsa.074490	Cucumber (Gy14) v1	cgycpiB072
CSPI03G05870	CmaCh16G008060	Cucurbita maxima (Rimu)	cmacpiB334
CSPI03G05870	Cp4.1LG14g00180	Cucurbita pepo (Zucchini)	cpecpiB218
CSPI03G05870	CsGy3G005990	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G05870	Carg24074	Silver-seed gourd	carcpiB0249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G05870	Cucurbita moschata (Rifu)	cmocpiB010
CSPI03G05870	Cucurbita moschata (Rifu)	cmocpiB326
CSPI03G05870	Cucurbita moschata (Rifu)	cmocpiB703
CSPI03G05870	Cucumber (Chinese Long) v2	cpicuB103
CSPI03G05870	Watermelon (Charleston Gray)	cpiwcgB221
CSPI03G05870	Watermelon (97103) v1	cpiwmB213
CSPI03G05870	Cucurbita pepo (Zucchini)	cpecpiB392
CSPI03G05870	Cucurbita pepo (Zucchini)	cpecpiB783
CSPI03G05870	Cucumber (Gy14) v2	cgybcpiB020
CSPI03G05870	Silver-seed gourd	carcpiB0696
CSPI03G05870	Silver-seed gourd	carcpiB0942
CSPI03G05870	Cucumber (Chinese Long) v3	cpicucB129
CSPI03G05870	Watermelon (97103) v2	cpiwmbB205
CSPI03G05870	Wax gourd	cpiwgoB218
CSPI03G05870	Wax gourd	cpiwgoB234
CSPI03G05870	Wild cucumber (PI 183967)	cpicpiB016
CSPI03G05870	Cucumber (Gy14) v1	cgycpiB173
CSPI03G05870	Cucurbita maxima (Rimu)	cmacpiB019
CSPI03G05870	Cucurbita maxima (Rimu)	cmacpiB710