CSPI03G05130 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G05130
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	NADH:ubiquinone oxidoreductase, 17.2kDa subunit
Location	Chr3 : 4157491 .. 4162695 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTTTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACCGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAAGTAAGTAGGTCTAAATACCCTTTCTTTTCTATTTCTATATTTTCCTTTCTTAGATTGCATTTGATCTTGAATGAGGTTCTTTCTTTGGGTTGCATTTTGAATTTCTAGATTTTTTCACTTATTTGTTTTTAAAAATTTGTTCTCTTTGTTTCTTTGTGCATTTCCTGTTCCATTGATCAATTTTAATTAAACAGTATTGGAAGTATAAAAGTACAGAAGAACTTAGCATCTAACTGATTTTGAACTGTGGAAAGCCACAGTTTTCTAAGCCCACCGTTGAACCTTTGCAATTGAGTTTAAAAATTGTACGCCATGTGTTGTTTTTTAGTTTTTTGAAAATTAAGCCTCCGAACACCACTTCTACATCTAAATATCTTGCTTTGTTATCTACTTTTTAAAAATCAAGTGGCCTAGTGTTAAAAAATCTGTCTCAATAACTAACTAAGAATAACTAAGAGTTCATAGAATTAATTTCCTACTAGTTTCCTTGACACCCAAATGTTCTAGGGACAGTTGGGTTCTCTCGGTGAGATTAGTTGAGGTGCCCGTAAGTTGCCCCGAACACTCGCGGATATGAAAAAAACTTGTTTTTGTTTTTGGAATTTGACATAGAATTCAACTTTTGTACTTGAAGAAATATGCAAGACATTGTAAGAAAATATCTTTTTGCACAGTTGTACTCAACATTAAGTGGATGATGTTCATGAGAAATGGAGAGAGAGCGCTCATGAATTAGGGTGATACATAGGTAGCTGCCTTTGTTGTTTATAGGATGAAACTTCTATCATTGGACATATACAGCTCACGCAATTTTCACTCTTTGGTTTGCTAGTGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGGTAAGCATTTATGGACCTATGTTTAAGACTTATGAATTAGGAGAAGGGCTTTGTTATTTGAATCATCCGATTATGTCATTTTTAAATCACGGTTTAAGATATAGTACCAGTTTTGGGAACATATCCAGTTTTGGGAACTTGAATGATTATTAACATGAGCTGGATATGTAGTCTAGAAAGAACCGAATTTGCTGATGTTAGGTTTTCCTGATGATGATTGCTTATATTTTATTGCTGCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGTAACCCATTACCTTCTTCCACGACCAACTGATCTTTGCATTCCACTTGAATGATCAGAGGATTTGTGATTGGTGTGCTACGCAGGATTTGATATTTATATTGTTTGTTCTTTTGCCATTGTCTTCAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCGTATGTTGACTCTTCAATAAAATTTTGCATCTTATTACTTGGTTGTTCATGACTGAACATTTTTCTACATTATGTAATTATCATCGTCAACTTCTCTATATCAAAATTGTGACTTATATACAGGAAGAAAGGTATGAATTGCATTGTACCTGAAATTGCCACATAGAGGTCACCCAAACATATTCATATTTGAGAATTAATTCTCTTAGAGTCCCATTTGGTAACTATTTCACTTTTTTTTTTTTTTGATTTTTGGAAATTAAGCCTATAAACACTTTTTACCCATGTTCTCATAAACGAAGTAAAATTTTGAAAACTAAGAAAAGTAGTCTTTAATAGCTTGTTTTTGTTTTTGGAATATGGCCAAGAATGCAACTCTTCTACTTGAAGATTGATACAAACCATGGTAAGAAAATCGGCTTATTTTCAAAAAACAAAATGGTTACCAAATGAGGCTGTAGGAATTGATGATTGACTTTATAATCTTACTCAAGACATTCTTACCAAGGTCTTCTTTCCTGCCTTAGTAGATAAGTTTTTCTGTAACCATCTTTTTATGAGGTATAAAAGCAATTATCATTTGATTTTGCAGTTCAGAATTAAATTTTATTTGATACTTTTAGAAGAACCAATATCATTCTCATTCTTTGACTTAACATGGTCTAACTGGAAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAGTTGCTTATTGACAAAAACTTAAGTGCTTGTTACACTTGTAGCATATAGCTAATATTCATTTGCTGCATAGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTATTATTTGATTTCATTTTGTATTTTCTCACCCCCTTAATCTCCTCCCCACTCCTCACCAAGAGAAAAGAAATGTGATTACATTCAATCCTTAAATAGGATTTTTTTAAGAGCCATGGAGCTCAATGGTTTAAAAGGCTCTTGATATCAATGTTTTAAGAGGCTATTGAGGTTTATGCCTCCTTGAGGCTCGCCCCAAGGCAAGACTCTAACTTTTAACCTTGAGACTTGTGTTTATAAAAATGCACTGAGTGACTGAAGTTTAACGATTATAAAAATAATATTATTTTTCCCCATTCTTCAAATACATAAAAGGTTTGATTTGTGATAAATTGAGCTATTATTATTACAATTACTACAAAAAAATTATCATTGATATAACGGAAAGAAAATTAATGTTCAAGGGTTACAAACTCTCGAGACTTGAAGGAAGTGAAAGTAAAACATAATCAGGAACTTTGAAACAATTACAGTTCTCTTCCTAATGCACTTTATTTTGAGCTATTACTAATTTCATATCGTGGCTTTAAGAGTGTCCAAACATAAAATTTTAGGATAAATCATATAATAATAGTAGTGATATTGATGTTAAAGATAACCTGTGGCACTTGGCAATGGTGATTATGTACACACACACTTTATGATTATGATGTTCAGTAACACCTAGTCAGTTCAATTTTAGGATTTGTAAAATATTTTCATCAAATTTGAGGCTTGCACCGCACCTAGAGGAAAGCCTCAAGATTGCATTTAGGCCTTTTCCCAATTGGAAAAAAAAGCATTTTTTATTTTAAATAATCATTTGGAATGATCTAAGTTTTTCCTCTTGTTGGCTGATTAATTCCATGTACCTCTTCTGGTCATGTGTAACTCTCCCAAATTTGATAGTTCATTTCATTTGGACTTGAGTATATTATACCGATTGGATGTTTACACTCAGTTCATTCATTTTGGTATTTCTTGTTCAAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTTTTTCTATATTGGTGAGGTGACATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTTATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACTTATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCGTTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCTTAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTAAGTTGATTTTTTTTTTTTTTTTCCCCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCATGTTGACATTAGATACAAGGGATTATGAAGGTTGGCATATCTTTTACCTTTTCAGAAAAAAGGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAGTGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAGACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCA

mRNA sequence

ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGA

Coding sequence (CDS)

ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGA

Homology

[Close]

BLAST of CSPI03G05130 vs. TrEMBL
Match: A0A0A0L526_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077630 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 8.2e-98
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPESSEPVGSGHTFKPGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPESSEPVGSGHTFKPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. TrEMBL
Match: M5WJ72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012099mg PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-67
Identity = 128/183 (69.95%), Postives = 153/183 (83.61%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF ++A FF+NRT+VG+DKAGNRYF  K+E+DGIMKEKRWV+FKGE+DPTSIPVEWI
Sbjct: 1   MSKLFQRVAGFFTNRTMVGMDKAGNRYFAKKDEVDGIMKEKRWVVFKGEEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEE+ +LEARRERVRQNVA LKKEE ER  +EG+ RK+IST +V GPD
Sbjct: 61  CWLNGQRKRAPTPEELMDLEARRERVRQNVAFLKKEEEERKEREGSTRKVISTDKVGGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQ    SEG ++ +   + + +RNS EKEA + K  PES+EP GSG TF+PGTWQ
Sbjct: 121 LKSFIRQFGVPSEGDENQKESVSMEGVRNSKEKEAKKAKQDPESTEPTGSGQTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. TrEMBL
Match: A0A067KSL9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00894 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.1e-65
Identity = 131/183 (71.58%), Postives = 146/183 (79.78%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF +I+ FFS+RTLVGVDKAGNRYF  KEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFSRISGFFSSRTLVGVDKAGNRYFTRKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM ELEARRE +RQNVALLKKEE ER +KEG+ RK++ TG+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRELIRQNVALLKKEEEERKAKEGSSRKVVRTGKVGGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSN-EKEAVQEKPIPESSEPVGSGHTFKPGTW 180
           LKSF+RQ P  SEG +  E     D  R    E E    +P+P SSE  GSG TFKPGTW
Sbjct: 121 LKSFMRQFPIASEGEKLGEESDAMDKQRTREAEAEIANGEPLPMSSEATGSGATFKPGTW 180

Query: 181 QPP 183
           QPP
Sbjct: 181 QPP 183

[Close]

BLAST of CSPI03G05130 vs. TrEMBL
Match: K7MQW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G095900 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.2e-65
Identity = 128/183 (69.95%), Postives = 146/183 (79.78%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           M +L GKI+ F SNRT+VGVDK GN+YF   EE+DGI+KEKRWV+FKGE+DPTSIPVEWI
Sbjct: 1   MRRLLGKISGFLSNRTMVGVDKTGNKYFTRNEEVDGIVKEKRWVIFKGEEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEE ER +KEG+  K +STG+V GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEEERITKEGSKGKRVSTGKVSGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFI+Q+P  SEG +  E       LRN  E  A +EK   ESSEP GSG +F+PGTWQ
Sbjct: 121 LKSFIQQLPVSSEGKEVEEPPSAMGGLRNPQESLAEKEKDESESSEPTGSGASFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. TrEMBL
Match: I1N0N6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G095900 PE=4 SV=2)

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-63
Identity = 129/184 (70.11%), Postives = 148/184 (80.43%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           M +L GKI+ F SNRT+VGVDK GN+YF   EE+DGI+KEKRWV+FKGE+DPTSIPVEWI
Sbjct: 1   MRRLLGKISGFLSNRTMVGVDKTGNKYFTRNEEVDGIVKEKRWVIFKGEEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEE ER +KEG+  K +STG+V GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEEERITKEGSKGKRVSTGKVSGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPT-RDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTW 180
           LKSFI+Q+P  SE   +VE  P+    LRN  E  A +EK   ESSEP GSG +F+PGTW
Sbjct: 121 LKSFIQQLPVSSE---EVEEPPSAMGGLRNPQESLAEKEKDESESSEPTGSGASFRPGTW 180

Query: 181 QPPT 184
           QPPT
Sbjct: 181 QPPT 181

[Close]

BLAST of CSPI03G05130 vs. TAIR10
Match: AT4G26965.1 (AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit)

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-55
Identity = 110/185 (59.46%), Postives = 138/185 (74.59%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWI
Sbjct: 1   MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEEEEKKARVGTGRK-ITIGKVDGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR-NSNEKEAVQ-EKPIPESSEPVGSGHTFKPGT 180
           L SF+RQ P  S+G +  E     D  R   +E E V  E P P+++EP GSG +F+PGT
Sbjct: 121 LTSFVRQFPPDSKGGEPEEASEEADKSRAKEHEPEIVSAEPPEPKTTEPSGSGSSFRPGT 180

Query: 181 WQPPT 184
           WQPP+
Sbjct: 181 WQPPS 184

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: gi|449470447|ref|XP_004152928.1| (PREDICTED: uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPESSEPVGSGHTFKPGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPESSEPVGSGHTFKPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: gi|778676073|ref|XP_011650524.1| (PREDICTED: uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.2e-95
Identity = 181/190 (95.26%), Postives = 182/190 (95.79%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPE-------SSEPVGSGHT 180
           LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIP+       SSEPVGSGHT
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPDSHSFIFRSSEPVGSGHT 180

Query: 181 FKPGTWQPPT 184
           FKPGTWQPPT
Sbjct: 181 FKPGTWQPPT 190

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: gi|694421736|ref|XP_009338702.1| (PREDICTED: uncharacterized protein LOC103931020 [Pyrus x bretschneideri])

HSP 1 Score: 272.7 bits (696), Expect = 4.7e-70
Identity = 134/183 (73.22%), Postives = 153/183 (83.61%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF K+A FF+NRT+VG+DKAGNRYF  KEE+DGIMKEKRWV FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFQKVAGFFTNRTMVGMDKAGNRYFARKEEVDGIMKEKRWVAFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEE+ ELEARRERVRQNVALLKKEE ER ++EG+ RK+I+T +V GPD
Sbjct: 61  CWLNGQRKRAPTPEELAELEARRERVRQNVALLKKEEEERKAREGSTRKVINTDKVGGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFI+Q P  SEG  + E     D +RNS EKEA + K  PES+EP GSG TF+PGTWQ
Sbjct: 121 LKSFIQQFPGSSEGGLNPEESVATDGVRNSKEKEAKKGKEAPESTEPTGSGQTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: gi|778676083|ref|XP_011650526.1| (PREDICTED: uncharacterized protein LOC101214441 isoform X4 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 2.3e-69
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQ 137
           LKSFIRQVPTGSEG Q
Sbjct: 121 LKSFIRQVPTGSEGTQ 136

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BLAST of CSPI03G05130 vs. NCBI nr
Match: gi|778676080|ref|XP_011650525.1| (PREDICTED: uncharacterized protein LOC101214441 isoform X3 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 2.3e-69
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 1


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQ 137
           LKSFIRQVPTGSEG Q
Sbjct: 121 LKSFIRQVPTGSEGTQ 136

The following BLAST results are available for this feature:

BLAST of CSPI03G05130 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G05130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L526_CUCSA	8.2e-98	99.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077630 PE=4 SV=1	[more]
M5WJ72_PRUPE	1.5e-67	69.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012099mg PE=4 SV=1	[more]
A0A067KSL9_JATCU	4.1e-65	71.58	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00894 PE=4 SV=1	[more]
K7MQW2_SOYBN	9.2e-65	69.95	Uncharacterized protein OS=Glycine max GN=GLYMA_18G095900 PE=4 SV=1	[more]
I1N0N6_SOYBN	2.3e-63	70.11	Uncharacterized protein OS=Glycine max GN=GLYMA_18G095900 PE=4 SV=2	[more]

BLAST of CSPI03G05130 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26965.1	2.0e-55	59.46	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

BLAST of CSPI03G05130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470447\|ref\|XP_004152928.1\|	1.2e-97	99.45	PREDICTED: uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus]	[more]
gi\|778676073\|ref\|XP_011650524.1\|	3.2e-95	95.26	PREDICTED: uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]	[more]
gi\|694421736\|ref\|XP_009338702.1\|	4.7e-70	73.22	PREDICTED: uncharacterized protein LOC103931020 [Pyrus x bretschneideri]	[more]
gi\|778676083\|ref\|XP_011650526.1\|	2.3e-69	99.26	PREDICTED: uncharacterized protein LOC101214441 isoform X4 [Cucumis sativus]	[more]
gi\|778676080\|ref\|XP_011650525.1\|	2.3e-69	99.26	PREDICTED: uncharacterized protein LOC101214441 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007763	NDUFA12
IPR007763	NDUFA12

Vocabulary: **Molecular Function**
Term	Definition
GO:0008137	NADH dehydrogenase (ubiquinone) activity
GO:0009055	electron carrier activity
GO:0008137	NADH dehydrogenase (ubiquinone) activity
GO:0009055	electron carrier activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0016020	membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G05130.2	CSPI03G05130.2	mRNA
CSPI03G05130.1	CSPI03G05130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 126..183 score: 3.0E-49coord: 1..78 score: 3.0
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 16..95 score: 4.2
None	No IPR available	unknown	Coil	Coil	coord: 76..96 scor
None	No IPR available	PANTHER	PTHR12910:SF1	NADH:UBIQUINONE OXIDOREDUCTASE SUBUNIT-17.2	coord: 126..183 score: 3.0E-49coord: 1..78 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G05130	Cla005310	Watermelon (97103) v1	cpiwmB193
CSPI03G05130	Csa3G077630	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G05130	MELO3C025377	Melon (DHL92) v3.5.1	cpimeB231
CSPI03G05130	ClCG10G005400	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G05130	Lsi05G005970	Bottle gourd (USVL1VR-Ls)	cpilsiB197
CSPI03G05130	MELO3C025377.2	Melon (DHL92) v3.6.1	cpimedB228
CSPI03G05130	CsaV3_3G005130	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G05130	Cla97C10G189650	Watermelon (97103) v2	cpiwmbB184
CSPI03G05130	Bhi11G000481	Wax gourd	cpiwgoB218
CSPI03G05130	Cucsa.059960	Cucumber (Gy14) v1	cgycpiB044
CSPI03G05130	CmaCh04G009570	Cucurbita maxima (Rimu)	cmacpiB710
CSPI03G05130	CmoCh04G010290	Cucurbita moschata (Rifu)	cmocpiB703
CSPI03G05130	Cp4.1LG01g08140	Cucurbita pepo (Zucchini)	cpecpiB392
CSPI03G05130	CsGy3G005190	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G05130	Carg00071	Silver-seed gourd	carcpiB0696

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G05130	Watermelon (97103) v2	cpiwmbB217
CSPI03G05130	Cucurbita maxima (Rimu)	cmacpiB019
CSPI03G05130	Cucurbita maxima (Rimu)	cmacpiB334
CSPI03G05130	Cucurbita moschata (Rifu)	cmocpiB010
CSPI03G05130	Cucurbita moschata (Rifu)	cmocpiB317
CSPI03G05130	Cucurbita pepo (Zucchini)	cpecpiB007
CSPI03G05130	Cucurbita pepo (Zucchini)	cpecpiB783
CSPI03G05130	Silver-seed gourd	carcpiB0942