CSPI02G25440 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G25440
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Glutaredoxin
Location	Chr2 : 21656016 .. 21656390 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTACCAAACCACGCCATCTTGGGGCTGTTACATGTCCACCTCCTCCCTCGAGGATCCCGTCGACCGTATAGAGCGGTTGGCAGCTGAGAACGCTGTCGTCATATTCAGCGTTAGTACATGTTGTATGTGTCACGCTATAAAACGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTACGAGCTCGACGAAGATCCAAGAGGAGGGGACATGGAGAAGGCACTCATGAGACTTTTGGGAAGCTCCTCTCCTGTTCCTGTCGTGTTTATCGGTGGGAAACTCGTGGGTGCCATGGATAGAGTCATGGCCTCTCATATTAGTGGAACTCTTGTTCCTCTTCTTAAAGATGCTGGAGCTCTCTGGCTTTGA

mRNA sequence

ATGCATTACCAAACCACGCCATCTTGGGGCTGTTACATGTCCACCTCCTCCCTCGAGGATCCCGTCGACCGTATAGAGCGGTTGGCAGCTGAGAACGCTGTCGTCATATTCAGCGTTAGTACATGTTGTATGTGTCACGCTATAAAACGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTACGAGCTCGACGAAGATCCAAGAGGAGGGGACATGGAGAAGGCACTCATGAGACTTTTGGGAAGCTCCTCTCCTGTTCCTGTCGTGTTTATCGGTGGGAAACTCGTGGGTGCCATGGATAGAGTCATGGCCTCTCATATTAGTGGAACTCTTGTTCCTCTTCTTAAAGATGCTGGAGCTCTCTGGCTTTGA

Coding sequence (CDS)

ATGCATTACCAAACCACGCCATCTTGGGGCTGTTACATGTCCACCTCCTCCCTCGAGGATCCCGTCGACCGTATAGAGCGGTTGGCAGCTGAGAACGCTGTCGTCATATTCAGCGTTAGTACATGTTGTATGTGTCACGCTATAAAACGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTACGAGCTCGACGAAGATCCAAGAGGAGGGGACATGGAGAAGGCACTCATGAGACTTTTGGGAAGCTCCTCTCCTGTTCCTGTCGTGTTTATCGGTGGGAAACTCGTGGGTGCCATGGATAGAGTCATGGCCTCTCATATTAGTGGAACTCTTGTTCCTCTTCTTAAAGATGCTGGAGCTCTCTGGCTTTGA

Homology

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BLAST of CSPI02G25440 vs. Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.1e-42
Identity = 85/135 (62.96%), Postives = 104/135 (77.04%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSS----LEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMG 60
           M Y        YM  ++    +E  V R+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 61  VNPTVYELDEDPRGGDMEKALMRLLGSSSP-------VPVVFIGGKLVGAMDRVMASHIS 120
           V+PTV+ELD DPRG ++E+AL RL+G   P       VPVVFIGGKLVGAMDRVMA+HI+
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GTLVPLLKDAGALWL 125
           G+LVPLLK+AGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of CSPI02G25440 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 4.0e-41
Identity = 79/113 (69.91%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 16  SSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEK 75
           ++ E   +R+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMGV+P V+ELD DPRG D+E+
Sbjct: 23  AAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLER 82

Query: 76  ALMRLLG----SSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           AL RL+G    +++ VPVVFIGGKLVGAMDRVMA+HI+G+LVPLLK+AGALWL
Sbjct: 83  ALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of CSPI02G25440 vs. Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 2.6e-40
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSS--------LEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLF 60
           M YQT  SWG Y  +S          +  + RIE LA+E+AVVIFSVSTCCMCHA+K LF
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--VPVVFIGGKLVGAMDRVMASH 120
            GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +PVVFIGGKLVGAMDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 ISGTLVPLLKDAGALWL 125
           I+G+LVPLLKDAGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of CSPI02G25440 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.2e-38
Identity = 72/103 (69.90%), Postives = 88/103 (85.44%), Query Frame = 1


Query: 22  VDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +DR+ RLAA+ AVVIFS+S+CCMCH + RLFC +GVNPTV ELDEDPRG +MEKAL RLL
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VP VFIGG+LVG+ D+VM+ H+SG LVPLL++AGALW+
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of CSPI02G25440 vs. Swiss-Prot
Match: GRXC8_ARATH (Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 7.9e-37
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 1


Query: 24  RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGS 83
           +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+RLLG 
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 84  SS-------PVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           SS        +PVVFIGGK+VGAM+RVMASHI+G+LVPLLKDAGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CSPI02G25440 vs. TrEMBL
Match: A0A0A0LMK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G405010 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 2.5e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of CSPI02G25440 vs. TrEMBL
Match: U3RE39_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX4 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 13  MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD 72
           MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD
Sbjct: 1   MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD 60

Query: 73  MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL
Sbjct: 61  MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 112

[Close]

BLAST of CSPI02G25440 vs. TrEMBL
Match: F6H458_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01570 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-55
Identity = 108/124 (87.10%), Postives = 116/124 (93.55%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQT  SWG YM T S+ DP++RIERLA+ENAVVIFS+S+CCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTE-SWGSYMPTRSVGDPLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRG +MEKALMRLLGSSS VPVVFIGGKLVGAMDRVMASHI+GTLVPLLKDAG
Sbjct: 61  VYELDEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 123

[Close]

BLAST of CSPI02G25440 vs. TrEMBL
Match: A0A0D2NF25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G274800 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-54
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMST--SSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVN 60
           MH QTT SWG YM T  +S+ DP++RIERLA+ENAVVIFS+S+CCMCHAIKRLFCGMGVN
Sbjct: 62  MHCQTTGSWGSYMPTPRTSVGDPLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVN 121

Query: 61  PTVYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKD 120
           PTVYELDEDPRG DMEKAL+RLLG+S PVPVVFIGGKLVGAMDRVMASHI+GTLVPLLK 
Sbjct: 122 PTVYELDEDPRGKDMEKALIRLLGTSPPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKQ 181

Query: 121 AGALWL 125
           AGALWL
Sbjct: 182 AGALWL 187

[Close]

BLAST of CSPI02G25440 vs. TrEMBL
Match: A0A061EEM8_THECC (Thioredoxin superfamily protein OS=Theobroma cacao GN=TCM_017271 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.6e-52
Identity = 106/126 (84.13%), Postives = 115/126 (91.27%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTS--SLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVN 60
           MH QT  SWG Y+ TS  S+ DP++RIERLA+ENAVVIFS+STCCMCHAIKRLFCGMGVN
Sbjct: 1   MHCQTG-SWGSYVPTSTRSVGDPLERIERLASENAVVIFSISTCCMCHAIKRLFCGMGVN 60

Query: 61  PTVYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKD 120
           PTVYELDEDPRG DME+ALMRLL SSS VPVVFIGGKLVGAMDRVMASHI+GTLVPLLK+
Sbjct: 61  PTVYELDEDPRGKDMERALMRLLRSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKE 120

Query: 121 AGALWL 125
           AGALWL
Sbjct: 121 AGALWL 125

[Close]

BLAST of CSPI02G25440 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-41
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSS--------LEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLF 60
           M YQT  SWG Y  +S          +  + RIE LA+E+AVVIFSVSTCCMCHA+K LF
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--VPVVFIGGKLVGAMDRVMASH 120
            GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +PVVFIGGKLVGAMDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 ISGTLVPLLKDAGALWL 125
           I+G+LVPLLKDAGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of CSPI02G25440 vs. TAIR10
Match: AT5G14070.1 (AT5G14070.1 Thioredoxin superfamily protein)

HSP 1 Score: 154.5 bits (389), Expect = 4.4e-38
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 1


Query: 24  RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGS 83
           +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+RLLG 
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 84  SS-------PVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           SS        +PVVFIGGK+VGAM+RVMASHI+G+LVPLLKDAGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CSPI02G25440 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 57/103 (55.34%), Postives = 80/103 (77.67%), Query Frame = 1


Query: 22  VDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +D+++++ +E +VVIFS ++CCM H IK LF   GVNPT+YELDE  RG ++E+AL + L
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQ-L 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VPVVFIGG+LVG  ++VM+ H++ +LVP+LK  GALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of CSPI02G25440 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-28
Identity = 57/103 (55.34%), Postives = 80/103 (77.67%), Query Frame = 1


Query: 22  VDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           ++ ++++ +E +VVIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E AL + L
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQ-L 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VPVVFIGG+LVG  ++VM+ H++ +LVP+LK AGALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CSPI02G25440 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 9.3e-28
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 22  VDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +D I ++  E  VVI+S S+CCM H IK L C  G NP VYELDE  RG ++E+AL+R L
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLR-L 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VP VFIGG+LVG  + VM+ H++G+L+P+LK AGALW+
Sbjct: 61  GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of CSPI02G25440 vs. NCBI nr
Match: gi|700208031|gb|KGN63150.1| (hypothetical protein Csa_2G405010 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 3.6e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of CSPI02G25440 vs. NCBI nr
Match: gi|659081382|ref|XP_008441305.1| (PREDICTED: glutaredoxin-C1-like [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTS LEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSVLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVF+GGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFVGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of CSPI02G25440 vs. NCBI nr
Match: gi|821595419|ref|NP_001295823.1| (glutaredoxin-C1-like [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 6.9e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 13  MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD 72
           MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD
Sbjct: 1   MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD 60

Query: 73  MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL
Sbjct: 61  MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 112

[Close]

BLAST of CSPI02G25440 vs. NCBI nr
Match: gi|225451521|ref|XP_002272852.1| (PREDICTED: glutaredoxin-C1 [Vitis vinifera])

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-55
Identity = 108/124 (87.10%), Postives = 116/124 (93.55%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQT  SWG YM T S+ DP++RIERLA+ENAVVIFS+S+CCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTE-SWGSYMPTRSVGDPLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRG +MEKALMRLLGSSS VPVVFIGGKLVGAMDRVMASHI+GTLVPLLKDAG
Sbjct: 61  VYELDEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 123

[Close]

BLAST of CSPI02G25440 vs. NCBI nr
Match: gi|719978309|ref|XP_010249120.1| (PREDICTED: glutaredoxin-C1-like [Nelumbo nucifera])

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-55
Identity = 107/124 (86.29%), Postives = 116/124 (93.55%), Query Frame = 1


Query: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQT  SWG YM T S+ DP++R+ERLA+ENAVVIFS+STCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTE-SWGSYMPTRSVGDPLERVERLASENAVVIFSISTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRG +MEKALMRLLGSSS VPVVFIGGKLVGAMDRVMASHI+GTLVPLLK+AG
Sbjct: 61  VYELDEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKEAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 123

The following BLAST results are available for this feature:

BLAST of CSPI02G25440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC3_ORYSJ	8.1e-42	62.96	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1	[more]
GRXC5_ORYSJ	4.0e-41	69.91	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2	[more]
GRXC7_ARATH	2.6e-40	66.42	Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2	[more]
GRXC1_ORYSJ	4.2e-38	69.90	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	[more]
GRXC8_ARATH	7.9e-37	72.22	Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=1 SV=2	[more]

BLAST of CSPI02G25440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMK1_CUCSA	2.5e-66	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G405010 PE=4 SV=1	[more]
U3RE39_CUCSA	4.8e-57	100.00	Glutaredoxin OS=Cucumis sativus GN=GRX4 PE=2 SV=1	[more]
F6H458_VITVI	1.5e-55	87.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01570 PE=4 SV=...	[more]
A0A0D2NF25_GOSRA	2.2e-54	84.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G274800 PE=4 SV=1	[more]
A0A061EEM8_THECC	3.6e-52	84.13	Thioredoxin superfamily protein OS=Theobroma cacao GN=TCM_017271 PE=4 SV=1	[more]

BLAST of CSPI02G25440 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02000.1	1.5e-41	66.42	Thioredoxin superfamily protein	[more]
AT5G14070.1	4.4e-38	72.22	Thioredoxin superfamily protein	[more]
AT4G15680.1	4.2e-28	55.34	Thioredoxin superfamily protein	[more]
AT4G15700.1	5.4e-28	55.34	Thioredoxin superfamily protein	[more]
AT5G18600.1	9.3e-28	55.34	Thioredoxin superfamily protein	[more]

BLAST of CSPI02G25440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208031\|gb\|KGN63150.1\|	3.6e-66	100.00	hypothetical protein Csa_2G405010 [Cucumis sativus]	[more]
gi\|659081382\|ref\|XP_008441305.1\|	2.4e-65	98.39	PREDICTED: glutaredoxin-C1-like [Cucumis melo]	[more]
gi\|821595419\|ref\|NP_001295823.1\|	6.9e-57	100.00	glutaredoxin-C1-like [Cucumis sativus]	[more]
gi\|225451521\|ref\|XP_002272852.1\|	2.2e-55	87.10	PREDICTED: glutaredoxin-C1 [Vitis vinifera]	[more]
gi\|719978309\|ref\|XP_010249120.1\|	2.9e-55	86.29	PREDICTED: glutaredoxin-C1-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G25440.1	CSPI02G25440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 34..97 score: 7.2
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 22..123 score: 22
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 25..124 score: 2.9
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 22..123 score: 4.4
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 22..123 score: 7.47
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..124 score: 3.2
None	No IPR available	PANTHER	PTHR10168:SF62	GLUTAREDOXIN-C7-RELATED	coord: 1..124 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G25440	Cla011850	Watermelon (97103) v1	cpiwmB167
CSPI02G25440	Csa2G405010	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G25440	MELO3C008169	Melon (DHL92) v3.5.1	cpimeB116
CSPI02G25440	ClCG11G007610	Watermelon (Charleston Gray)	cpiwcgB112
CSPI02G25440	Lsi03G004140	Bottle gourd (USVL1VR-Ls)	cpilsiB113
CSPI02G25440	MELO3C008169.2	Melon (DHL92) v3.6.1	cpimedB112
CSPI02G25440	CsaV3_2G033960	Cucumber (Chinese Long) v3	cpicucB081
CSPI02G25440	Cla97C11G215870	Watermelon (97103) v2	cpiwmbB106
CSPI02G25440	Bhi04G002005	Wax gourd	cpiwgoB161
CSPI02G25440	Cucsa.087910	Cucumber (Gy14) v1	cgycpiB093
CSPI02G25440	CmaCh15G000670	Cucurbita maxima (Rimu)	cmacpiB281
CSPI02G25440	CmoCh15G000670	Cucurbita moschata (Rifu)	cmocpiB271
CSPI02G25440	Cp4.1LG13g11420	Cucurbita pepo (Zucchini)	cpecpiB168
CSPI02G25440	CsGy2G025070	Cucumber (Gy14) v2	cgybcpiB057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G25440	Silver-seed gourd	carcpiB0018
CSPI02G25440	Silver-seed gourd	carcpiB1048
CSPI02G25440	Cucurbita maxima (Rimu)	cmacpiB702
CSPI02G25440	Cucurbita moschata (Rifu)	cmocpiB695
CSPI02G25440	Cucurbita pepo (Zucchini)	cpecpiB385