Bhi04G002005 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G002005
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Glutaredoxin
Location	chr4 : 66817457 .. 66818295 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCACTAAACCCCCCCTAAAATTTGTGTTTCTTGTGTGGGAACTTGGAAGAAATTATGCATTATCAAACCACGCCATCTTGGGGGTGTTACGTGTCCACCTCCGCTCTCGAGGATCCGATCGAGAGGATAGAGCGGTTGGCTGCCGAGAATGCCGTCGTCATCTTTAGTGTTAGTACGTGTTGCATGTGCCACGCTATAAAGCGATTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTACGAACTTGATGAGGACCCGAGAGGAGGGGACATGGAGAAGGCTCTCATGAGGCTTTTGGGAAGCTCCTCTCCCGTTCCTGTTGTGTTTATCGGTGGTAAACTCGTCGGTGCCATGGATAGAGTCATGGCCTCTCATATCAATGGAACTCTTGTTCCTCTTCTTAAAGACGTTGGAGCTCTTTGGCTTTGACTTTAATCTCTCTTTAAAAATAAATTATTCGTTGAGGCTAGAGTAACGTGACTGACGATTCTATACTGTTGGAGATAGGAGAGAAATTAAAAAATTATAATTTGACCTACTCCATTGGTTTAGTTGAGACAGTTACACTAATCTATCCCAATTATGAATAATTTTTTTGCTTAATTATTCTGCAAAGCAAGGGAGGGAATACATGTATGACCTTTTCTTTTTCACTAATTTTTTTTACAGAGGAAGAGGAGTGTCGGTGTTTTTTTTTTGGGTTTGGTTGGTCAGTCCCCACTACTTAGGACATACTAATTAATCAACTAATTAATGTTCAGTTTCAGTACAACATTATCCCTTTTGTTTTGTTTAATTAGTGATTATTTGGTTTGATTTTTTTTATTATCAGAAAGA

mRNA sequence

AATCACTAAACCCCCCCTAAAATTTGTGTTTCTTGTGTGGGAACTTGGAAGAAATTATGCATTATCAAACCACGCCATCTTGGGGGTGTTACGTGTCCACCTCCGCTCTCGAGGATCCGATCGAGAGGATAGAGCGGTTGGCTGCCGAGAATGCCGTCGTCATCTTTAGTGTTAGTACGTGTTGCATGTGCCACGCTATAAAGCGATTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTACGAACTTGATGAGGACCCGAGAGGAGGGGACATGGAGAAGGCTCTCATGAGGCTTTTGGGAAGCTCCTCTCCCGTTCCTGTTGTGTTTATCGGTGGTAAACTCGTCGGTGCCATGGATAGAGTCATGGCCTCTCATATCAATGGAACTCTTGTTCCTCTTCTTAAAGACGTTGGAGCTCTTTGGCTTTGACTTTAATCTCTCTTTAAAAATAAATTATTCGTTGAGGCTAGAGTAACGTGACTGACGATTCTATACTGTTGGAGATAGGAGAGAAATTAAAAAATTATAATTTGACCTACTCCATTGGTTTAGTTGAGACAGTTACACTAATCTATCCCAATTATGAATAATTTTTTTGCTTAATTATTCTGCAAAGCAAGGGAGGGAATACATGTATGACCTTTTCTTTTTCACTAATTTTTTTTACAGAGGAAGAGGAGTGTCGGTGTTTTTTTTTTGGGTTTGGTTGGTCAGTCCCCACTACTTAGGACATACTAATTAATCAACTAATTAATGTTCAGTTTCAGTACAACATTATCCCTTTTGTTTTGTTTAATTAGTGATTATTTGGTTTGATTTTTTTTATTATCAGAAAGA

Coding sequence (CDS)

ATGCATTATCAAACCACGCCATCTTGGGGGTGTTACGTGTCCACCTCCGCTCTCGAGGATCCGATCGAGAGGATAGAGCGGTTGGCTGCCGAGAATGCCGTCGTCATCTTTAGTGTTAGTACGTGTTGCATGTGCCACGCTATAAAGCGATTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTACGAACTTGATGAGGACCCGAGAGGAGGGGACATGGAGAAGGCTCTCATGAGGCTTTTGGGAAGCTCCTCTCCCGTTCCTGTTGTGTTTATCGGTGGTAAACTCGTCGGTGCCATGGATAGAGTCATGGCCTCTCATATCAATGGAACTCTTGTTCCTCTTCTTAAAGACGTTGGAGCTCTTTGGCTTTGA

Protein sequence

MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL

Homology

[Close]

BLAST of Bhi04G002005 vs. Swiss-Prot
Match: sp|Q6K609|GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.2e-42
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSA----LEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMG 60
           M Y        Y+  +A    +E  + R+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 61  VNPTVYELDEDPRGGDMEKALMRLLGSSSP-------VPVVFIGGKLVGAMDRVMASHIN 120
           V+PTV+ELD DPRG ++E+AL RL+G   P       VPVVFIGGKLVGAMDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GTLVPLLKDVGALWL 125
           G+LVPLLK+ GALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of Bhi04G002005 vs. Swiss-Prot
Match: sp|Q96305|GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 9.1e-41
Identity = 91/137 (66.42%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTS--------ALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLF 60
           M YQ T SWG Y  +S          +  + RIE LA+E+AVVIFSVSTCCMCHA+K LF
Sbjct: 1   MQYQ-TESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--VPVVFIGGKLVGAMDRVMASH 120
            GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +PVVFIGGKLVGAMDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGTLVPLLKDVGALWL 125
           ING+LVPLLKD GALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Bhi04G002005 vs. Swiss-Prot
Match: sp|Q0JDM4|GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-39
Identity = 77/103 (74.76%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 26  ERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLG--- 85
           ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMGV+P V+ELD DPRG D+E+AL RL+G   
Sbjct: 33  ERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLERALARLVGAGG 92

Query: 86  -SSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
            +++ VPVVFIGGKLVGAMDRVMA+HING+LVPLLK+ GALWL
Sbjct: 93  AAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of Bhi04G002005 vs. Swiss-Prot
Match: sp|Q8LF89|GRXC8_ARATH (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-37
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 20  DPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMR 79
           + + +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+R
Sbjct: 29  ETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLR 88

Query: 80  LLGSSS-------PVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           LLG SS        +PVVFIGGK+VGAM+RVMASHING+LVPLLKD GALWL
Sbjct: 89  LLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Bhi04G002005 vs. Swiss-Prot
Match: sp|Q7G8Y5|GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-36
Identity = 69/103 (66.99%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 22  IERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           ++R+ RLAA+ AVVIFS+S+CCMCH + RLFC +GVNPTV ELDEDPRG +MEKAL RLL
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           G S  VP VFIGG+LVG+ D+VM+ H++G LVPLL++ GALW+
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Bhi04G002005 vs. TAIR10
Match: AT3G02000.1 (Thioredoxin superfamily protein)

HSP 1 Score: 167.5 bits (423), Expect = 5.0e-42
Identity = 91/137 (66.42%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTS--------ALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLF 60
           M YQ T SWG Y  +S          +  + RIE LA+E+AVVIFSVSTCCMCHA+K LF
Sbjct: 1   MQYQ-TESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--VPVVFIGGKLVGAMDRVMASH 120
            GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +PVVFIGGKLVGAMDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGTLVPLLKDVGALWL 125
           ING+LVPLLKD GALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Bhi04G002005 vs. TAIR10
Match: AT5G14070.1 (Thioredoxin superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 2.6e-38
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 20  DPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMR 79
           + + +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+R
Sbjct: 29  ETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLR 88

Query: 80  LLGSSS-------PVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           LLG SS        +PVVFIGGK+VGAM+RVMASHING+LVPLLKD GALWL
Sbjct: 89  LLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Bhi04G002005 vs. TAIR10
Match: AT4G15670.1 (Thioredoxin superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-28
Identity = 57/103 (55.34%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 22  IERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +E+++++ +E ++VIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E+AL + L
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQ-L 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           G S  VPVVFIGG+LVG  ++VM+ H+N +L+P+LK VGALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]

BLAST of Bhi04G002005 vs. TAIR10
Match: AT4G15680.1 (Thioredoxin superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-28
Identity = 58/103 (56.31%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 22  IERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +++++++ +E +VVIFS ++CCM H IK LF   GVNPT+YELDE  RG ++E+AL + L
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQ-L 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           G S  VPVVFIGG+LVG  ++VM+ H+N +LVP+LK VGALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Bhi04G002005 vs. TAIR10
Match: AT4G15700.1 (Thioredoxin superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 3.2e-28
Identity = 58/103 (56.31%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 22  IERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +E ++++ +E +VVIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E AL + L
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQ-L 60

Query: 82  GSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           G S  VPVVFIGG+LVG  ++VM+ H+N +LVP+LK  GALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Bhi04G002005 vs. TrEMBL
Match: tr|A0A0A0LMK1|A0A0A0LMK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G405010 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.4e-64
Identity = 118/124 (95.16%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCY+STS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHI+GTLVPLLKD G
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Bhi04G002005 vs. TrEMBL
Match: tr|A0A1S3B356|A0A1S3B356_CUCME (glutaredoxin-C1 OS=Cucumis melo OX=3656 GN=LOC103485463 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCY+STS LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSVLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVF+GGKLVGAMDRVMASHI+GTLVPLLKD G
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFVGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Bhi04G002005 vs. TrEMBL
Match: tr|F6H458|F6H458_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01570 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.8e-55
Identity = 107/124 (86.29%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQ T SWG Y+ T ++ DP+ERIERLA+ENAVVIFS+S+CCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQ-TESWGSYMPTRSVGDPLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120
           VYELDEDPRG +MEKALMRLLGSSS VPVVFIGGKLVGAMDRVMASHINGTLVPLLKD G
Sbjct: 61  VYELDEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 123

[Close]

BLAST of Bhi04G002005 vs. TrEMBL
Match: tr|A0A1U7ZMC8|A0A1U7ZMC8_NELNU (glutaredoxin-C1-like OS=Nelumbo nucifera OX=4432 GN=LOC104591792 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.3e-55
Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQ T SWG Y+ T ++ DP+ER+ERLA+ENAVVIFS+STCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQ-TESWGSYMPTRSVGDPLERVERLASENAVVIFSISTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120
           VYELDEDPRG +MEKALMRLLGSSS VPVVFIGGKLVGAMDRVMASHINGTLVPLLK+ G
Sbjct: 61  VYELDEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKEAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 123

[Close]

BLAST of Bhi04G002005 vs. TrEMBL
Match: tr|U3RE39|U3RE39_CUCSA (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX4 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 13  VSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD 72
           +STS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD
Sbjct: 1   MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGD 60

Query: 73  MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVGALWL 125
           MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHI+GTLVPLLKD GALWL
Sbjct: 61  MEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 112

[Close]

BLAST of Bhi04G002005 vs. NCBI nr
Match: KGN63150.1 (hypothetical protein Csa_2G405010 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-63
Identity = 118/124 (95.16%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCY+STS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHI+GTLVPLLKD G
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Bhi04G002005 vs. NCBI nr
Match: XP_008441305.1 (PREDICTED: glutaredoxin-C1 [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 1.9e-63
Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCY+STS LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSVLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVPVVF+GGKLVGAMDRVMASHI+GTLVPLLKD G
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFVGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Bhi04G002005 vs. NCBI nr
Match: XP_023551484.1 (glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 3.7e-59
Identity = 112/125 (89.60%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MHYQTTPSWGCYV-STSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQTTPSWGCY+ +T+ALEDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTTPSWGCYMATTAALEDPVERIERLAAENAVVIFSISTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDV 120
           TV+ELDEDPRGG+MEKALM LLG+SS VPVVFIGGKLVGAMDRVMASHI+GTLVPLLKD 
Sbjct: 61  TVHELDEDPRGGEMEKALMTLLGTSSAVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Bhi04G002005 vs. NCBI nr
Match: XP_022939500.1 (glutaredoxin-C1 [Cucurbita moschata] >XP_022992843.1 glutaredoxin-C1-like [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 8.3e-59
Identity = 111/125 (88.80%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MHYQTTPSWGCYV-STSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQTTPSWGCY+ +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTTPSWGCYMATTAAVEDPVERIERLAAENAVVIFSISTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDV 120
           TV+ELDEDPRGG+MEKALM LLG+SS VPVVFIGGKLVGAMDRVMASHI+GTLVPLLKD 
Sbjct: 61  TVHELDEDPRGGEMEKALMTLLGTSSAVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Bhi04G002005 vs. NCBI nr
Match: XP_022134224.1 (glutaredoxin-C1-like [Momordica charantia])

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-56
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MHYQTTPSWGCYVSTSAL-EDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQT   WGCYV  +A  EDP+ERI+RLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTQQPWGCYVGRAAAGEDPVERIQRLAAENAVVIFSMSTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDV 120
           TVYELDEDPRGGDMEKALMRLLG+SS VPVVFIGGKLVGAMDRVMASHI+G+LVPLLKD 
Sbjct: 61  TVYELDEDPRGGDMEKALMRLLGTSSAVPVVFIGGKLVGAMDRVMASHISGSLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

The following BLAST results are available for this feature:

BLAST of Bhi04G002005 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6K609\|GRXC3_ORYSJ	8.2e-42	62.22	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
sp\|Q96305\|GRXC7_ARATH	9.1e-41	66.42	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]
sp\|Q0JDM4\|GRXC5_ORYSJ	2.2e-39	74.76	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
sp\|Q8LF89\|GRXC8_ARATH	4.7e-37	69.64	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
sp\|Q7G8Y5\|GRXC1_ORYSJ	1.4e-36	66.99	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of Bhi04G002005 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02000.1	5.0e-42	66.42	Thioredoxin superfamily protein	[more]
AT5G14070.1	2.6e-38	69.64	Thioredoxin superfamily protein	[more]
AT4G15670.1	1.1e-28	55.34	Thioredoxin superfamily protein	[more]
AT4G15680.1	1.9e-28	56.31	Thioredoxin superfamily protein	[more]
AT4G15700.1	3.2e-28	56.31	Thioredoxin superfamily protein	[more]

BLAST of Bhi04G002005 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LMK1\|A0A0A0LMK1_CUCSA	7.4e-64	95.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G405010 PE=4 SV=1	[more]
tr\|A0A1S3B356\|A0A1S3B356_CUCME	1.3e-63	94.35	glutaredoxin-C1 OS=Cucumis melo OX=3656 GN=LOC103485463 PE=4 SV=1	[more]
tr\|F6H458\|F6H458_VITVI	4.8e-55	86.29	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01570 PE=4 SV=...	[more]
tr\|A0A1U7ZMC8\|A0A1U7ZMC8_NELNU	6.3e-55	85.48	glutaredoxin-C1-like OS=Nelumbo nucifera OX=4432 GN=LOC104591792 PE=4 SV=1	[more]
tr\|U3RE39\|U3RE39_CUCSA	1.8e-54	94.64	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX4 PE=2 SV=1	[more]

BLAST of Bhi04G002005 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63150.1	1.1e-63	95.16	hypothetical protein Csa_2G405010 [Cucumis sativus]	[more]
XP_008441305.1	1.9e-63	94.35	PREDICTED: glutaredoxin-C1 [Cucumis melo]	[more]
XP_023551484.1	3.7e-59	89.60	glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939500.1	8.3e-59	88.80	glutaredoxin-C1 [Cucurbita moschata] >XP_022992843.1 glutaredoxin-C1-like [Cucur...	[more]
XP_022134224.1	1.3e-56	87.20	glutaredoxin-C1-like [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron carrier activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M002005	Bhi04M002005	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 25..124 e-value: 2.9E-43 score: 143.9
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 12..123 e-value: 1.0E-29 score: 104.5
None	No IPR available	PANTHER	PTHR10168:SF128	GLUTAREDOXIN-C7-RELATED	coord: 13..124
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 13..124
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 33..115 e-value: 8.7247E-38 score: 123.804
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 34..97 e-value: 7.4E-14 score: 51.6
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 22..123 score: 22.564
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 22..123

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G002005	Csa2G405010	Cucumber (Chinese Long) v2	cuwgoB164
Bhi04G002005	MELO3C008169	Melon (DHL92) v3.5.1	mewgoB341
Bhi04G002005	ClCG11G007610	Watermelon (Charleston Gray)	wcgwgoB159
Bhi04G002005	CSPI02G25440	Wild cucumber (PI 183967)	cpiwgoB161
Bhi04G002005	Cucsa.087910	Cucumber (Gy14) v1	cgywgoB111
Bhi04G002005	CmaCh15G000670	Cucurbita maxima (Rimu)	cmawgoB0397
Bhi04G002005	CmoCh15G000670	Cucurbita moschata (Rifu)	cmowgoB0392
Bhi04G002005	Lsi03G004140	Bottle gourd (USVL1VR-Ls)	lsiwgoB322
Bhi04G002005	Cp4.1LG13g11420	Cucurbita pepo (Zucchini)	cpewgoB0247
Bhi04G002005	CsGy2G025070	Cucumber (Gy14) v2	cgybwgoB159
Bhi04G002005	MELO3C008169.2	Melon (DHL92) v3.6.1	medwgoB340
Bhi04G002005	CsaV3_2G033960	Cucumber (Chinese Long) v3	cucwgoB171
Bhi04G002005	Cla011850	Watermelon (97103) v1	wgowmB344
Bhi04G002005	Cla97C11G215870	Watermelon (97103) v2	wgowmbB293

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G002005	Cucurbita maxima (Rimu)	cmawgoB0860
Bhi04G002005	Cucurbita moschata (Rifu)	cmowgoB0857
Bhi04G002005	Cucurbita pepo (Zucchini)	cpewgoB0525
Bhi04G002005	Silver-seed gourd	carwgoB0022
Bhi04G002005	Silver-seed gourd	carwgoB1187