CSPI02G25240 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G25240
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Zinc finger protein, putative
Location	Chr2 : 21531224 .. 21531754 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTAATTCCTTTTTCTTAGTTTCTAATTTAATCACTCTCTTCTCCTCTGTCTCTCTTTCTCTCTACAATGTCCAACTCTCATCTTAAGCTTTTTGGTTTCAGCATCTCAAAAGAGAATAAAACGGTTTCTAATTTTAAAGAGCCACCGCTGACGGTGGAGTCACCGGAATCAGAAAACTCCTTTCCTCCAAAGTTCGAGTGTCGATATTGCTGCAGACAATTTTCGAATTCGCAAGCTTTGGGTGGTCATCAAAACGCCCATAAAGAAGAGAGACAGCTTTTGAAGACGCCTCAAATCAAATATTTTCAACGTAATTACTTCACATCTCTGCGCGTGCAGAGCTGGCTGTCGTCGTCCTTCGCGCCGCCGCCTCCCCCAATGGTGGTGGATGCTCCTCTACCGCCTGTTGCGGGGCTTTACGCTACGTCACGGCCCGCGTTTTCCGAGGCAGGAGTAGGAGATGAAGATGTTTCCGGTAGGAGTTTGGGCCTTGATTTACAGCTTAGTCTTGGGCCTGGTAAGACTTGA

mRNA sequence

ATGTCCAACTCTCATCTTAAGCTTTTTGGTTTCAGCATCTCAAAAGAGAATAAAACGGTTTCTAATTTTAAAGAGCCACCGCTGACGGTGGAGTCACCGGAATCAGAAAACTCCTTTCCTCCAAAGTTCGAGTGTCGATATTGCTGCAGACAATTTTCGAATTCGCAAGCTTTGGGTGGTCATCAAAACGCCCATAAAGAAGAGAGACAGCTTTTGAAGACGCCTCAAATCAAATATTTTCAACGTAATTACTTCACATCTCTGCGCGTGCAGAGCTGGCTGTCGTCGTCCTTCGCGCCGCCGCCTCCCCCAATGGTGGTGGATGCTCCTCTACCGCCTGTTGCGGGGCTTTACGCTACGTCACGGCCCGCGTTTTCCGAGGCAGGAGTAGGAGATGAAGATGTTTCCGGTAGGAGTTTGGGCCTTGATTTACAGCTTAGTCTTGGGCCTGGTAAGACTTGA

Coding sequence (CDS)

ATGTCCAACTCTCATCTTAAGCTTTTTGGTTTCAGCATCTCAAAAGAGAATAAAACGGTTTCTAATTTTAAAGAGCCACCGCTGACGGTGGAGTCACCGGAATCAGAAAACTCCTTTCCTCCAAAGTTCGAGTGTCGATATTGCTGCAGACAATTTTCGAATTCGCAAGCTTTGGGTGGTCATCAAAACGCCCATAAAGAAGAGAGACAGCTTTTGAAGACGCCTCAAATCAAATATTTTCAACGTAATTACTTCACATCTCTGCGCGTGCAGAGCTGGCTGTCGTCGTCCTTCGCGCCGCCGCCTCCCCCAATGGTGGTGGATGCTCCTCTACCGCCTGTTGCGGGGCTTTACGCTACGTCACGGCCCGCGTTTTCCGAGGCAGGAGTAGGAGATGAAGATGTTTCCGGTAGGAGTTTGGGCCTTGATTTACAGCTTAGTCTTGGGCCTGGTAAGACTTGA

Homology

[Close]

BLAST of CSPI02G25240 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 66/197 (33.50%), Postives = 85/197 (43.15%), Query Frame = 1


Query: 4   SHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGHQN 63
           S LKLFG ++  E  +V N    P       SE+    K+EC+YCCR+F+NSQALGGHQN
Sbjct: 6   SSLKLFGINLL-ETTSVQNQSSEPRPGSGSGSESR---KYECQYCCREFANSQALGGHQN 65

Query: 64  AHKEERQLLKTPQI---KYFQRNYFTSLRVQSWLSSSFAP---------PPPPMVVDAPL 123
           AHK+ERQLLK  Q+   +   R++         L S+FAP         PPP M++    
Sbjct: 66  AHKKERQLLKRAQMLATRGLPRHHNFHPHTNP-LLSAFAPLPHLLSQPHPPPHMMLSPSS 125

Query: 124 PPVAGLYATSRPAFSEAG---------------------------------VGDEDVSG- 151
                LY     + +  G                                  GD D S  
Sbjct: 126 SSSKWLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVKTHGGSLPEMRRFAGDSDRSSG 185

[Close]

BLAST of CSPI02G25240 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1


Query: 6  LKLFGFSIS---KENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGHQ 65
          ++LFGF      +E+++  N+ E   +++    E     +F+C YC R F  SQALGGHQ
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEK----RFKCHYCFRNFPTSQALGGHQ 78

Query: 66 NAHKEERQLLK 74
          NAHK ERQ  K
Sbjct: 79 NAHKRERQQTK 85

[Close]

BLAST of CSPI02G25240 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 2  SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGH 61
          S+  +KLFGF +   ++T        ++  +  +  +   + EC+YC ++F+NSQALGGH
Sbjct: 19 SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62 QNAHKEERQLLKTPQIK 79
          QNAHK+ER   K  Q++
Sbjct: 79 QNAHKKERLKKKRLQLQ 95

[Close]

BLAST of CSPI02G25240 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.8e-07
Identity = 34/83 (40.96%), Postives = 41/83 (49.40%), Query Frame = 1


Query: 16  ENKTVSNFKEPPLTVESPESENSFPP--KFECRYCCRQFSNSQALGGHQNAHKEERQLLK 75
           + K     +E   T ++    NS     +FEC YC R F  SQALGGHQNAHK ERQL K
Sbjct: 62  QTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAK 121

Query: 76  TPQIKYF---QRNYFTSLRVQSW 94
                YF     N ++     SW
Sbjct: 122 RGVSSYFYHPDNNPYSYRHYPSW 144

[Close]

BLAST of CSPI02G25240 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 1


Query: 10  GFSISKENKTVSNFKEPPLTV---ESPESENSFPPKFECRYCCRQFSNSQALGGHQNAHK 69
           G + S E   + +FK    +    +  + + + P  F C YC R+F +SQALGGHQNAHK
Sbjct: 32  GTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHK 91

Query: 70  EERQLLKTPQIKYFQRNYFTSLRVQSWLSSSFA 100
            ER L K        R  +  + + S  SS+FA
Sbjct: 92  RERTLAK--------RGQYYKMTLSSLPSSAFA 116

[Close]

BLAST of CSPI02G25240 vs. TrEMBL
Match: A0A0A0LQ31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404810 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.0e-40
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1   MSNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG 60
           +SNSHLKLFGFSISKENK VSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG
Sbjct: 34  VSNSHLKLFGFSISKENKRVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG 93

Query: 61  HQNAHKEERQLLKTPQIKYFQRNYF 86
           HQNAHKEERQLLKTPQIKYF+RNYF
Sbjct: 94  HQNAHKEERQLLKTPQIKYFRRNYF 118

[Close]

BLAST of CSPI02G25240 vs. TrEMBL
Match: A0A067KMC9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-16
Identity = 71/163 (43.56%), Postives = 90/163 (55.21%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGH 61
           +NS LKLFGF+I  EN T +N         SPES+     K+EC+YCCR+F+NSQALGGH
Sbjct: 16  TNSTLKLFGFNIL-ENNTDNNNISSKSPSGSPESDTE-TRKYECQYCCREFANSQALGGH 75

Query: 62  QNAHKEERQLLKTPQIKYFQRNYFTSLRVQSWLSSSFAPPP----PPMVVDAP------- 121
           QNAHK+ERQLLK  QI+   RN+  S  V + + S+F+P P    PP VV AP       
Sbjct: 76  QNAHKKERQLLKRAQIQ-ASRNFAASY-VPNSMFSNFSPLPPHLLPPAVVPAPPQLIQQH 135

Query: 122 -LPPVAGLYATSRPAFSEAGVGDEDVSGRSLGLDLQLSLGPGK 153
             PP    Y TS      +      +SG   GL +   + P K
Sbjct: 136 QSPP--WFYTTSSYMSRMSHARPSLISGPGEGLGVYARISPEK 172

[Close]

BLAST of CSPI02G25240 vs. TrEMBL
Match: B9H314_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s09710g PE=4 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 8.6e-16
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPP----KFECRYCCRQFSNSQA 61
           +N+ LKLFGF IS+ N              S ESE +F      K+EC+YCCR+F+NSQA
Sbjct: 4   NNTTLKLFGFDISENNNPTVPLDSSKSPSGSQESETNFQSSEGRKYECQYCCREFANSQA 63

Query: 62  LGGHQNAHKEERQLLKTPQIKYFQRNYFTS-LRVQSWLSSSFAPPPPPMVVDAPLPPVAG 121
           LGGHQNAHK+ER+LLK  Q++  +     S + + + + S+F+PPPP ++  A +P  A 
Sbjct: 64  LGGHQNAHKKERRLLKRAQMQATRSLAAASYVTIPNSMFSTFSPPPPHLLDPAVVPMAAA 123

Query: 122 L--YATSRPAF 126
           +  +A S P F
Sbjct: 124 MQEHAHSSPWF 134

[Close]

BLAST of CSPI02G25240 vs. TrEMBL
Match: U5GCR3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15460g PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-15
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVS-NFKEPPLTVESPES--ENSFPPKFECRYCCRQFSNSQAL 61
           +N+ LKLFGF+IS+   TV  +  + P   + PES  ++S   K+EC+YC R+F+NSQAL
Sbjct: 16  NNTTLKLFGFNISENTPTVPLDSSKSPSGSQEPESSFQSSKGRKYECQYCYREFANSQAL 75

Query: 62  GGHQNAHKEERQLLKTPQIKYFQRNYFTS-LRVQSWLSSSFAPPPPPMVVDAPLPPVAG- 121
           GGHQNAHK+ERQLLK  Q++  +R    S + + + + S+F P PP ++  A +P  A  
Sbjct: 76  GGHQNAHKKERQLLKRAQMQATRRLALASYVTIPNSMFSTFIPSPPHLLDPAVVPVEAAR 135

Query: 122 -LYATSRPAFSEAGVGDEDVSGRSL 141
             +A S P F ++ +G     GR L
Sbjct: 136 QQHAHSPPWFYKSYLGRMSRDGRYL 160

[Close]

BLAST of CSPI02G25240 vs. TrEMBL
Match: A0A161X640_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007252 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.5e-15
Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGH 61
           +N  +KLFGF++++E++ V + K P  + +S     +   K+EC+YCCR+F+NSQALGGH
Sbjct: 17  ANGRIKLFGFNVTEEDEEVDSTKTPSGSSDSGGVPPTDGRKYECQYCCREFANSQALGGH 76

Query: 62  QNAHKEERQLLKTPQIKYFQRNYFTSLRVQSWLSSSFAPPP------PPMVVDAPLPPVA 119
           QNAHK+ERQ LK  Q++   RN   S  +++ + S+FAPPP       PM++ +   P +
Sbjct: 77  QNAHKKERQQLKRAQMQ-ASRNAAVSY-MRNPMVSAFAPPPHLLAPSMPMILPSAAAPPS 136

[Close]

BLAST of CSPI02G25240 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 9.4e-14
Identity = 53/144 (36.81%), Postives = 70/144 (48.61%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPP-------------------- 61
           + S LKLFGFS+  E        +  L+  SPE    FP                     
Sbjct: 11  TTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPE-RGEFPAGSSGRSGGGVRSRGGGGGGG 70

Query: 62  --KFECRYCCRQFSNSQALGGHQNAHKEERQLLKTPQIK-------YFQRNYFTSLRVQS 117
             K+EC+YCCR+F NSQALGGHQNAHK+ERQ LK  Q++        F      S  +++
Sbjct: 71  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRN 130

[Close]

BLAST of CSPI02G25240 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 66/197 (33.50%), Postives = 85/197 (43.15%), Query Frame = 1


Query: 4   SHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGHQN 63
           S LKLFG ++  E  +V N    P       SE+    K+EC+YCCR+F+NSQALGGHQN
Sbjct: 6   SSLKLFGINLL-ETTSVQNQSSEPRPGSGSGSESR---KYECQYCCREFANSQALGGHQN 65

Query: 64  AHKEERQLLKTPQI---KYFQRNYFTSLRVQSWLSSSFAP---------PPPPMVVDAPL 123
           AHK+ERQLLK  Q+   +   R++         L S+FAP         PPP M++    
Sbjct: 66  AHKKERQLLKRAQMLATRGLPRHHNFHPHTNP-LLSAFAPLPHLLSQPHPPPHMMLSPSS 125

Query: 124 PPVAGLYATSRPAFSEAG---------------------------------VGDEDVSG- 151
                LY     + +  G                                  GD D S  
Sbjct: 126 SSSKWLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVKTHGGSLPEMRRFAGDSDRSSG 185

[Close]

BLAST of CSPI02G25240 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.1e-09
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1


Query: 6  LKLFGFSIS---KENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGHQ 65
          ++LFGF      +E+++  N+ E   +++    E     +F+C YC R F  SQALGGHQ
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEK----RFKCHYCFRNFPTSQALGGHQ 78

Query: 66 NAHKEERQLLK 74
          NAHK ERQ  K
Sbjct: 79 NAHKRERQQTK 85

[Close]

BLAST of CSPI02G25240 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 2  SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGH 61
          S+  +KLFGF +   ++T        ++  +  +  +   + EC+YC ++F+NSQALGGH
Sbjct: 19 SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62 QNAHKEERQLLKTPQIK 79
          QNAHK+ER   K  Q++
Sbjct: 79 QNAHKKERLKKKRLQLQ 95

[Close]

BLAST of CSPI02G25240 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 34/83 (40.96%), Postives = 41/83 (49.40%), Query Frame = 1


Query: 16  ENKTVSNFKEPPLTVESPESENSFPP--KFECRYCCRQFSNSQALGGHQNAHKEERQLLK 75
           + K     +E   T ++    NS     +FEC YC R F  SQALGGHQNAHK ERQL K
Sbjct: 62  QTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAK 121

Query: 76  TPQIKYF---QRNYFTSLRVQSW 94
                YF     N ++     SW
Sbjct: 122 RGVSSYFYHPDNNPYSYRHYPSW 144

[Close]

BLAST of CSPI02G25240 vs. NCBI nr
Match: gi|778673065|ref|XP_011649919.1| (PREDICTED: zinc finger protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 7.2e-40
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1   MSNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG 60
           +SNSHLKLFGFSISKENK VSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG
Sbjct: 34  VSNSHLKLFGFSISKENKRVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG 93

Query: 61  HQNAHKEERQLLKTPQIKYFQRNYF 86
           HQNAHKEERQLLKTPQIKYF+RNYF
Sbjct: 94  HQNAHKEERQLLKTPQIKYFRRNYF 118

[Close]

BLAST of CSPI02G25240 vs. NCBI nr
Match: gi|802634534|ref|XP_012078046.1| (PREDICTED: zinc finger protein 6 [Jatropha curcas])

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-16
Identity = 71/163 (43.56%), Postives = 90/163 (55.21%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGH 61
           +NS LKLFGF+I  EN T +N         SPES+     K+EC+YCCR+F+NSQALGGH
Sbjct: 16  TNSTLKLFGFNIL-ENNTDNNNISSKSPSGSPESDTE-TRKYECQYCCREFANSQALGGH 75

Query: 62  QNAHKEERQLLKTPQIKYFQRNYFTSLRVQSWLSSSFAPPP----PPMVVDAP------- 121
           QNAHK+ERQLLK  QI+   RN+  S  V + + S+F+P P    PP VV AP       
Sbjct: 76  QNAHKKERQLLKRAQIQ-ASRNFAASY-VPNSMFSNFSPLPPHLLPPAVVPAPPQLIQQH 135

Query: 122 -LPPVAGLYATSRPAFSEAGVGDEDVSGRSLGLDLQLSLGPGK 153
             PP    Y TS      +      +SG   GL +   + P K
Sbjct: 136 QSPP--WFYTTSSYMSRMSHARPSLISGPGEGLGVYARISPEK 172

[Close]

BLAST of CSPI02G25240 vs. NCBI nr
Match: gi|720028981|ref|XP_010265079.1| (PREDICTED: zinc finger protein 6-like [Nelumbo nucifera])

HSP 1 Score: 92.8 bits (229), Expect = 5.6e-16
Identity = 61/129 (47.29%), Postives = 82/129 (63.57%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGGH 61
           +N  LKLFGF++S+E++ V + K P  + ES     +   KFEC+YCCR+F+NSQALGGH
Sbjct: 15  NNVRLKLFGFNVSEEDE-VDSSKTPSGSTESGSFPANDGRKFECQYCCREFANSQALGGH 74

Query: 62  QNAHKEERQLLKTPQIKYFQRNYFTSLRVQSWLSSSFAPPP------PPMVVDAPLPPVA 121
           QNAHK+ERQ LK  Q++   RN   S  V++ + S+FAPPP       P+VV A +P   
Sbjct: 75  QNAHKKERQQLKRAQMQ-AGRNSAASY-VRNPMISAFAPPPHLLAPAGPVVVPAGVPQSP 134

Query: 122 GLYATSRPA 125
                SRPA
Sbjct: 135 SWIYMSRPA 140

[Close]

BLAST of CSPI02G25240 vs. NCBI nr
Match: gi|566165781|ref|XP_002305826.2| (hypothetical protein POPTR_0004s09710g, partial [Populus trichocarpa])

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVSNFKEPPLTVESPESENSFPP----KFECRYCCRQFSNSQA 61
           +N+ LKLFGF IS+ N              S ESE +F      K+EC+YCCR+F+NSQA
Sbjct: 4   NNTTLKLFGFDISENNNPTVPLDSSKSPSGSQESETNFQSSEGRKYECQYCCREFANSQA 63

Query: 62  LGGHQNAHKEERQLLKTPQIKYFQRNYFTS-LRVQSWLSSSFAPPPPPMVVDAPLPPVAG 121
           LGGHQNAHK+ER+LLK  Q++  +     S + + + + S+F+PPPP ++  A +P  A 
Sbjct: 64  LGGHQNAHKKERRLLKRAQMQATRSLAAASYVTIPNSMFSTFSPPPPHLLDPAVVPMAAA 123

Query: 122 L--YATSRPAF 126
           +  +A S P F
Sbjct: 124 MQEHAHSSPWF 134

[Close]

BLAST of CSPI02G25240 vs. NCBI nr
Match: gi|566171565|ref|XP_006383433.1| (hypothetical protein POPTR_0005s15460g [Populus trichocarpa])

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 1


Query: 2   SNSHLKLFGFSISKENKTVS-NFKEPPLTVESPES--ENSFPPKFECRYCCRQFSNSQAL 61
           +N+ LKLFGF+IS+   TV  +  + P   + PES  ++S   K+EC+YC R+F+NSQAL
Sbjct: 16  NNTTLKLFGFNISENTPTVPLDSSKSPSGSQEPESSFQSSKGRKYECQYCYREFANSQAL 75

Query: 62  GGHQNAHKEERQLLKTPQIKYFQRNYFTS-LRVQSWLSSSFAPPPPPMVVDAPLPPVAG- 121
           GGHQNAHK+ERQLLK  Q++  +R    S + + + + S+F P PP ++  A +P  A  
Sbjct: 76  GGHQNAHKKERQLLKRAQMQATRRLALASYVTIPNSMFSTFIPSPPHLLDPAVVPVEAAR 135

Query: 122 -LYATSRPAFSEAGVGDEDVSGRSL 141
             +A S P F ++ +G     GR L
Sbjct: 136 QQHAHSPPWFYKSYLGRMSRDGRYL 160

The following BLAST results are available for this feature:

BLAST of CSPI02G25240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP6_ARATH	2.2e-12	33.50	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	[more]
GIS2_ARATH	1.6e-07	42.25	Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1	[more]
ZFP5_ARATH	2.1e-07	37.66	Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1	[more]
GIS_ARATH	2.8e-07	40.96	Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1	[more]
ZFP1_ARATH	1.8e-06	36.56	Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1	[more]

BLAST of CSPI02G25240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ31_CUCSA	5.0e-40	96.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404810 PE=4 SV=1	[more]
A0A067KMC9_JATCU	3.0e-16	43.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1	[more]
B9H314_POPTR	8.6e-16	42.75	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s09710g P...	[more]
U5GCR3_POPTR	1.9e-15	42.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15460g PE=4 SV=1	[more]
A0A161X640_DAUCA	9.5e-15	41.46	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007252 PE=4 SV=1	[more]

BLAST of CSPI02G25240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68360.1	9.4e-14	36.81	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	1.2e-13	33.50	zinc finger protein 6	[more]
AT5G06650.1	9.1e-09	42.25	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	1.2e-08	37.66	zinc finger protein 5	[more]
AT3G58070.1	1.6e-08	40.96	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of CSPI02G25240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778673065\|ref\|XP_011649919.1\|	7.2e-40	96.47	PREDICTED: zinc finger protein 8 isoform X1 [Cucumis sativus]	[more]
gi\|802634534\|ref\|XP_012078046.1\|	4.3e-16	43.56	PREDICTED: zinc finger protein 6 [Jatropha curcas]	[more]
gi\|720028981\|ref\|XP_010265079.1\|	5.6e-16	47.29	PREDICTED: zinc finger protein 6-like [Nelumbo nucifera]	[more]
gi\|566165781\|ref\|XP_002305826.2\|	1.2e-15	42.75	hypothetical protein POPTR_0004s09710g, partial [Populus trichocarpa]	[more]
gi\|566171565\|ref\|XP_006383433.1\|	2.8e-15	42.07	hypothetical protein POPTR_0005s15460g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G25240.1	CSPI02G25240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 45..65 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 43..70 score: 1
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 42..70 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G25240	Cla011876	Watermelon (97103) v1	cpiwmB167
CSPI02G25240	Csa2G404810	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G25240	ClCG11G007850	Watermelon (Charleston Gray)	cpiwcgB112
CSPI02G25240	Lsi03G004380	Bottle gourd (USVL1VR-Ls)	cpilsiB113
CSPI02G25240	CsaV3_2G033740	Cucumber (Chinese Long) v3	cpicucB081
CSPI02G25240	Cla97C11G215620	Watermelon (97103) v2	cpiwmbB106
CSPI02G25240	Bhi04G002029	Wax gourd	cpiwgoB161
CSPI02G25240	Cucsa.088090	Cucumber (Gy14) v1	cgycpiB093
CSPI02G25240	CmaCh15G000500	Cucurbita maxima (Rimu)	cmacpiB281
CSPI02G25240	CmoCh15G000510	Cucurbita moschata (Rifu)	cmocpiB271
CSPI02G25240	Cp4.1LG13g11400	Cucurbita pepo (Zucchini)	cpecpiB168
CSPI02G25240	CsGy2G024890	Cucumber (Gy14) v2	cgybcpiB057
CSPI02G25240	Carg22847	Silver-seed gourd	carcpiB1119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G25240	Melon (DHL92) v3.6.1	cpimedB112
CSPI02G25240	Silver-seed gourd	carcpiB0018
CSPI02G25240	Cucurbita maxima (Rimu)	cmacpiB702
CSPI02G25240	Cucurbita moschata (Rifu)	cmocpiB695
CSPI02G25240	Melon (DHL92) v3.5.1	cpimeB116
CSPI02G25240	Cucurbita pepo (Zucchini)	cpecpiB385