CSPI02G22850 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G22850
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Selenoprotein H
Location	Chr2 : 19835864 .. 19840930 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAGGTAATAAGAAGAGGCGACGTGACAATAAATGATAGTGGAGACTGGCGCCATTTCTGGGACTTCGTGCCGCCACTTTCTTCCAAAGAAGAAACCAAGTGGAACCGCGTGGGCGTCGTACCACCACCCAGTCAACGGCCTCGATCCCCTCTCACAGTCTAAATCCATCTCCACCGTTTCTTCAAATTCTCACCGCCGTCCCCTAGGGCGGGAAAACACCCACCCCCCGAACTCCGCTTCTGTATATCACTACAAACCAACGGTCACACCTTCGAAAACCCACCCATAACTTTACCTTCGTCCTCATACTTCCTCTTTTTTCTTTTCCTTTCTACGGTTTCACTTCTCCTTTCATGGCGCCCAGGAAGCGAACCAAGAACCAAGAAGAAGACCTGGTGGTGGAGAAGCCGGCCCCGGCGACGTCCAGAGTGACTCGGAGTTCCGCTCGCCTGTCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGTTGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGGGAAACTTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGGTGAGTTTTTCTTGTTTGTAATTGAAAATATGTTGGTTAATTTGAAGATGAACTTTCGAGGGTTTGAGATGCTTGCTTTATCTTCGTCGAATTTGTTAGTTCCTGTTGTGGGCTTTTTTGTTTGGGTTAATTTTTTTTTTTTTTGCTTGAAACGTGGATGGATTCATTTCTAGGGTTTCGTAGAATAAAAGTTTTGACTTTCTTTCTTGAAACGTGGATTCATTTCTAGCCTGCGCCTCCCATGGCTTCTCCACATTTCTTCTTCTACTACTGCCATTTTCTCTCCTCATCTCGGCGTTCGCCCATCTTTTTAGTTTTCTCCATGAAATTCTACATATTAACATCGAATTTACCATCCGCTTTTGATGCATTCTGTTGAGGGAATTTTTAATTGCTCACAATTTTGAGAATTTAATTTTTGTTAGCTTATTCACATCGTATATCCGAAACATGCGCACTTTCTAATTCAGGGCATTGCTAGAGATTTTTGTTTGAAGAAAGCCAACTTTAAATATAAATAATCTCTGAACTTTAATAATCAGAGGCAAATTGGGGGGGCGGGGACATGATTTTCTTTTTTTTTTTCTATGAAAAGCTAAGTCTGAGTAAGGGACCATTTCTTCTTTATTCTTGGCTTCGCCTTTGCTTTTTGCAATGTATCGTCTAATGAATTGAAAAGGATAATACAAACGTGGCGTTTCATGGTTGTGAAAAATTCCCTATAATATGGATGCTTCTGCCTTTCTCATGTCATGTGCGACGATTGTCTTACGACACTTTTCCCCATATTTTTGTTCCCTTGTAGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCTGATAAGGTATTTTTCTGAAATCATCAACTTTTACTTCCTATTCTTCATTAAAAGAATCAATTTGAGTTTATTTTGTTCTCCTAGCAAAATTTTAATACACATGATACTGGTCTGTTTATTTGATCGTCCTTTGAATTTGTTCTTCATTGTCCTTCCATTTTGTGGAAGGTGGAGGCTTTAGTTTCCGAGCACTTTTACTTTGAACAACCAGAAAATGCATTATTTGTTCATGTAAGCTTATAAGTTTGCTGCTGGGCTGGAGTCACAGTGGTGCTAGGAAACACCCAATGGTTCATATTTACAAGCCTAGATACGATCCTTGTTTTATTTTTTTAATATTTAAAATTCAACGTTTGCTGTCAAATAGTTGTCTACGTCTTTGATTTTATGGTGTTTTGATGTCGAAAGCCTGAGTTTGAATTCTTAAGAATTGGGTCTTCAGTTGATTCACAAGTTAACTTATAGATAGAAAAGCAGTTAGAATTCTCATTTGATAATCACGGAAGACCTTTTAGTTCTGTGTTTTTTTTGGTTGGTAAACATCAAAGCTAATCTCCATATTCCATGCGAAGTGAAATATCTCAGGGATTAGTTCCAACTCCTTGCTGACCATTTATCTAACTATTTATTTTGAGAATGCCACCAAAGTATCACATTGATTATGGGTAAATAAGTAGGAGACAACATCTCCTTTAGTACGGGGCTTTTTGGCAGTATTGGTTTCATTGCTTCGCCGAAGAGAAGTTAGCTTGATTAAAGGTGATTGTTAGAGAGTAAACCCAAACAAATGAATATTTGAAAGGAGGCTTGGTGGTTCTTCGAGCGGCTAATTGTTGGGCATGAGACCGAAGTCTTACATTAACTAGAAAAGGAGGAGATCATGGGTACATGAGTGAGTGACAGGATCTCTGGTCTCCATCAGTGTATGAAATCTTTTGGGTGATCCTGAAAACAAAACTACGAGAGCTTATGTCCATAGTGAACAATATCCTACTGTGGGGATATGTGGGTGGGATATTATGATCCTATGAGTTTCTTGAGATAATCAATTGTTATATATATATTTTATTACCTGATTGGATTTTGGCAATTTTCTACTCTATTTTAAGAAACTGCTACATATCAGTGAAAATTTTATTCAGAAAATTGAGTACTGAAAACTAAATAGATATGTTTATTCGATGAAATTATCATTTTTTCACAATTTTAACTACCTTACTTGAGCAAGATCTCTTTAATGGGTTGTACAACTATGTCATTGAGTTCTAAATATTATTTATTTTTCTTACTATGCAGCCAAGAAGGGGTTGCTTTGAAATCCGAAGCAAAGATGGGGAGAAGTTTATCAGTCTTCTGGTAATTATCACCTTCAACTTCAATTATAAAAAAAATTATTTCCGATTATCTGGAAATTTGTCAAGTACTCAAGCTCAATGATTTAGGATCTATTTACTGATAGGCAAGCACATCTTTACTCTTTAGTTAAATTTTGATCGGTTTTTAGACCATGTAATCTTCACTGCTATATCCTGTTGTAAATTGTCAAAATTATTCCGTTCTTATAGTTTGATTCTCTTTTGACTAACTGGAGATGTTTTTTGTAACTCCTTTGGTTTAGGGTTTTTCCCCTCATCTTTTGTTCATACATCAATGGAATTGTTTCTTACAGAAAAAGAATTAAAAGAAAAATGTTCTCCTTTTTGGTGCCAAAATTTAGTTGTTTTCAATGATTTATATATATACTGTTCTTTTTTGGTTCATCTTGGTCTGTATTATTTTTCCTAATTATTATATTTTTTTTCTCTAGGCTTGCTCTGTTTTTTCTTAGCCAATTGAAGTAGAATTTCCTAACTCATAGGTCTTTTGAGTTATACCCAATCTCTCTTCTTTACGTTAATCCTTCATTTTAATTGTACTTGTGCTCCCCATAAAATTTCGCTCAATTCATTTTTGTTGACCAGTGTTAATAAATTTCCATTTCTAGTTTAATGAAGTTACATGATTAAGTGAGTTTGCTAAGTATTTTACATATATTATTTCTTTGTGAAATATGATATTGTTGGCTACTAATAACTGATCTAGACTTGCTAGAATATGCAATGCTTAGATGTTTTGTTTGATATTCCAAGTAGTATAAATACTATCTTAGTACTATTACATTTATTTAACAAGTGAGTGCGATGATCAGAACCTCCAACTGGATATTGGCCTGAATATTTGGACTTTAAAACTTTACCTTTAAAACTTTACCATACAATTTCAGAATTGGATTTGTGTAGGTGTAAGGATTCCTCGATTTGATGCCCTTAGGTCAATTCTTGTTATTCATTCTAAACCCTTCTTCAAGTTAGCCCTCTTCCCTCTTTAAGACAACTATCTCTTTTCTTTGTTTTAGATCAAGGACAATTGTCTTGCACTATTGGCACCTAGAGGTCCATATTTGAATTTCGGTTTTTGTATCCCCCCCTTTTTTCTTATTTATTATGATTTGTTTAATGTGCCTATGATTATATGTTACTTTTTACACCAAAGAGGTTCCTCGACCTTTGTACATCTTTTGATTATGAGTTTGTGATCTGTCAAAGCTATCTAATGACCATTTTGATTATGAGTTTTGCCGATTTAATCGTAAGTTCACTAATAACCATTTTGCAACCACGCACTTAAAATGATTGACAAGCTGTCATATAACATTGTACATTTCATTTATAGGACATGAAGCGGCCATTTACCCGCATGAAGGAACTGAACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGATGAAGGGCTTTAATGAAAAATTGCCTTTCTAAGGATGCAATGGTTTTTTTTTGTGGTGGTTTGAAGCTAACCAACTAGAGTACCTTTGATGGTGGAAAACTTGCTAATGATCATTTGCCAATGTCAATATTGCCTCCTCGCTTGGGATAACTGCAATGGTAAAGCCATCAGGTTTGAACAAACATGGTGAAATATTTTTTTGGTTTAAGCTTCATAATGAACGAGTCTATCTTTGAAGAAGACTTGTCCTTTGTATTAGTAGCAGTAGAAACCTACCCTTACCTAAGATGAGGGTGGCTCTATATTGCATCCTTGAATTGTGTATTTTTGTGTGAATCAATAGAGTTTTATTTGCACCTTTTTTTTCTTGTATAAGAGATCTAAGCCAGAAAACTAGGAGAGATTCCTTTATCCCAACTATGTCCCTAAGGCAAGATAAGGATTAGAGATGAGCATCGGTTGGTTTGCTTTGGTTTTGTGCTCAAATTGATTTCGAACATCAATTTGTTGATTTTAACGAGTCTTGGTTGTTGATTTTGGAAGGATCTATTGAACCAACTGGTCTACTGCATGGATGGTTGGTCAGTTGGTTTTAGTTAGTTGCTTATGGAACGAAACTTTGTTGGAGTTGAGAAGGAAAGGTAGTTATGGTGGTGTTGGCCTCCAATGAAGAGACGATTGGGACACTTGAAGAAATGATTAATTTATTAATTAGTTTAAATAGGCATTTATTACCTATC

mRNA sequence

ATGGCGCCCAGGAAGCGAACCAAGAACCAAGAAGAAGACCTGGTGGTGGAGAAGCCGGCCCCGGCGACGTCCAGAGTGACTCGGAGTTCCGCTCGCCTGTCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGTTGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGGGAAACTTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCTGATAAGCCAAGAAGGGGTTGCTTTGAAATCCGAAGCAAAGATGGGGAGAAGTTTATCAGTCTTCTGGACATGAAGCGGCCATTTACCCGCATGAAGGAACTGAACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGA

Coding sequence (CDS)

ATGGCGCCCAGGAAGCGAACCAAGAACCAAGAAGAAGACCTGGTGGTGGAGAAGCCGGCCCCGGCGACGTCCAGAGTGACTCGGAGTTCCGCTCGCCTGTCGGCGAACTCCAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGTTGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATGTTGGTTTGGGGAAACTTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCTGATAAGCCAAGAAGGGGTTGCTTTGAAATCCGAAGCAAAGATGGGGAGAAGTTTATCAGTCTTCTGGACATGAAGCGGCCATTTACCCGCATGAAGGAACTGAACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGA

Homology

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BLAST of CSPI02G22850 vs. TrEMBL
Match: A0A0A0LPC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379100 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.3e-86
Identity = 169/172 (98.26%), Postives = 172/172 (100.00%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLSANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKRTKNQEEDLVVEKPAPATSR+TRSSARL+ANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRS+DGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 172

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BLAST of CSPI02G22850 vs. TrEMBL
Match: A0A067KNP0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07005 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.9e-42
Identity = 102/181 (56.35%), Postives = 122/181 (67.40%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLSANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR    E +  V+  A  ++RVTRSS+R  ANS + +   ELPK+KK K A KE  
Sbjct: 1   MAPRKRKAGGEAEQAVKPIAVTSTRVTRSSSR-RANSNSPVPPAELPKAKKGKAAKKEKS 60

Query: 61  KVEEVENKEVKVDVGL----------GKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGL 120
           K EE E  E + +              K   D   +T+VIEHCKQC SFK RA QV+TGL
Sbjct: 61  KPEEKEETETETETETETKTENVEEKDKTTADGTGKTIVIEHCKQCNSFKTRATQVKTGL 120

Query: 121 ENGVPGITVLLNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKI 172
           E+ VPGI VLLNP+KPRRGCFEIR + GEKFISLLDMKRPF  MK+L+M+EVI+DII KI
Sbjct: 121 EDAVPGINVLLNPEKPRRGCFEIRREGGEKFISLLDMKRPFKPMKDLDMEEVIADIISKI 180

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BLAST of CSPI02G22850 vs. TrEMBL
Match: A0A067FMA4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028564mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35
Identity = 103/207 (49.76%), Postives = 125/207 (60.39%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPAT-SRVTRSSARLS----ANSKADLTVTELP-KSKKAKR 60
           MAPRKR     E   V++ A  T +RVTRS  R      A+S  +L   ELP K+KKAK 
Sbjct: 1   MAPRKRKAEGVEGAAVKRVAETTLTRVTRSVTRRVNSNLADSSVELAKAELPTKNKKAKA 60

Query: 61  APKENGKV--------EEVENKEVKVDVGLGKLDKD----------------------AK 120
             K+N K         EE+E ++VKV   + + + +                      +K
Sbjct: 61  TGKKNKKKKKEDVKAEEEIEAEKVKVQEDVVEPETEEAEEEVEPDKEEAAGDAFDGDESK 120

Query: 121 SRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSKDGEKFISL 172
            RTVVIEHCKQC SFK RA  V+ GLE GVPGI VLLNP+KPRRGCFEIR   GEKFISL
Sbjct: 121 ERTVVIEHCKQCNSFKTRANHVKDGLEKGVPGINVLLNPEKPRRGCFEIREDGGEKFISL 180

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BLAST of CSPI02G22850 vs. TrEMBL
Match: V4UGQ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009502mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35
Identity = 103/207 (49.76%), Postives = 125/207 (60.39%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPAT-SRVTRSSARLS----ANSKADLTVTELP-KSKKAKR 60
           MAPRKR     E   V++ A  T +RVTRS  R      A+S  +L   ELP K+KKAK 
Sbjct: 1   MAPRKRKAEGVEGAAVKRVAETTLTRVTRSVTRRVNSNLADSSVELAKAELPTKNKKAKA 60

Query: 61  APKENGKV--------EEVENKEVKVDVGLGKLDKD----------------------AK 120
             K+N K         EE+E ++VKV   + + + +                      +K
Sbjct: 61  TGKKNKKKKKEDVKAEEEIEAEKVKVQEDVVEPETEEAEEEVEPDKEEAAGDAFDGDESK 120

Query: 121 SRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSKDGEKFISL 172
            RTVVIEHCKQC SFK RA  V+ GLE GVPGI VLLNP+KPRRGCFEIR   GEKFISL
Sbjct: 121 ERTVVIEHCKQCNSFKTRANHVKDGLEKGVPGINVLLNPEKPRRGCFEIRKDGGEKFISL 180

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BLAST of CSPI02G22850 vs. TrEMBL
Match: B9SPQ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0204920 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-34
Identity = 90/177 (50.85%), Postives = 114/177 (64.41%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLSANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR     +D      A  T RVTRSSARL A S+      ELPK KK K A  ++ 
Sbjct: 1   MAPRKRKSEAADDATA---AVTTKRVTRSSARL-AKSRPAAPAAELPKKKKGKVAAADHK 60

Query: 61  KVEEVENKEVKVDVGLGKLDKDAKS------RTVVIEHCKQCQSFKKRAIQVQTGLENGV 120
           K E+ E    K +      +++ ++      +T+VIEHC QC+SFK  A QV+ GLE  +
Sbjct: 61  KAEKKEESVKKTEEADNVEEQEQETADGENKKTIVIEHCTQCRSFKTSATQVKNGLEAAL 120

Query: 121 PGITVLLNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK 172
           P + VLLNPDKPR+GCFEIR + GEKFI+LL MKRPF  MK+L+M +VISDII+KIK
Sbjct: 121 PSVIVLLNPDKPRKGCFEIRKEGGEKFITLLGMKRPFKPMKDLDMKKVISDIIDKIK 173

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BLAST of CSPI02G22850 vs. TAIR10
Match: AT2G24440.1 (AT2G24440.1 selenium binding)

HSP 1 Score: 142.1 bits (357), Expect = 3.2e-34
Identity = 84/159 (52.83%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 25  RVTRSSARLSANSKADLTVTELPKSKKAKR-------APKENGKVEEV-----ENKEVKV 84
           R TRS  +   +S + L   E P+ KK K        A K+  K EEV     + +E   
Sbjct: 26  RKTRSDTKRDGSS-SKLMKIESPEKKKRKTTKAKNVGAAKKKVKKEEVAVKIEKEEEEDD 85

Query: 85  DVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFE 144
           D    + D D+  + +VIEHCKQC+SFK+RA +V+ GLE  VPGI V +NPDKPRRGCFE
Sbjct: 86  DAAEKEEDDDSDKKKIVIEHCKQCKSFKERANEVKEGLEEAVPGIIVTVNPDKPRRGCFE 145

Query: 145 IRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK 172
           IR + GE FISLL MKRPFT MKELNM+EVI+DI+EKIK
Sbjct: 146 IREEGGETFISLLAMKRPFTPMKELNMEEVIADIVEKIK 183

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BLAST of CSPI02G22850 vs. TAIR10
Match: AT4G31360.1 (AT4G31360.1 selenium binding)

HSP 1 Score: 138.7 bits (348), Expect = 3.5e-33
Identity = 89/186 (47.85%), Postives = 115/186 (61.83%), Query Frame = 1


Query: 3   PRKRTKNQEEDLVVEKPAPATSRVTRS------SARLSANSKADLTVTELPKSKKAKRA- 62
           P K++K   E+        A+SRVTRS      S      +KA  + T+ P +KKAKR  
Sbjct: 2   PPKKSKADGEEKAKPLTTLASSRVTRSMDSRTRSQTQQNGAKAAGSATK-PATKKAKRKN 61

Query: 63  -------PKENGKVEEVENKEVKVDVGLGKLDKDAKSRT---VVIEHCKQCQSFKKRAIQ 122
                   K+  K EEVE  E  V+  + K + + +  T   +VIEHCKQC +FK RAIQ
Sbjct: 62  SAIETGRAKKGKKEEEVEEPEEAVEEEVEKEEPEVEDPTRTKIVIEHCKQCNAFKTRAIQ 121

Query: 123 VQTGLENGVPGITVLLNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISD 172
           V+  LE  VPG+TV LNP+KPRRGCFEIR + G+ FISLL+MKRPF  MK L+M+EVI D
Sbjct: 122 VKEALEGAVPGVTVSLNPEKPRRGCFEIREEGGQTFISLLEMKRPFAPMKALDMEEVIED 181

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BLAST of CSPI02G22850 vs. NCBI nr
Match: gi|449441986|ref|XP_004138763.1| (PREDICTED: selenoprotein H [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 3.4e-86
Identity = 169/172 (98.26%), Postives = 172/172 (100.00%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLSANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKRTKNQEEDLVVEKPAPATSR+TRSSARL+ANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRS+DGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 172

[Close]

BLAST of CSPI02G22850 vs. NCBI nr
Match: gi|659088655|ref|XP_008445096.1| (PREDICTED: selenoprotein H [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 2.5e-81
Identity = 161/172 (93.60%), Postives = 168/172 (97.67%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLSANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR+KNQEE+  +EKPAPATSRVTRSSARL+ANSKADLTVTELPKSKKAKRAPKENG
Sbjct: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENG 60

Query: 61  KVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120
           KVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL
Sbjct: 61  KVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVL 120

Query: 121 LNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 173
           LNPDKPRRGCFEIRS+DG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Sbjct: 121 LNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 172

[Close]

BLAST of CSPI02G22850 vs. NCBI nr
Match: gi|802624107|ref|XP_012076318.1| (PREDICTED: selenoprotein H [Jatropha curcas])

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 102/181 (56.35%), Postives = 122/181 (67.40%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLSANSKADLTVTELPKSKKAKRAPKENG 60
           MAPRKR    E +  V+  A  ++RVTRSS+R  ANS + +   ELPK+KK K A KE  
Sbjct: 1   MAPRKRKAGGEAEQAVKPIAVTSTRVTRSSSR-RANSNSPVPPAELPKAKKGKAAKKEKS 60

Query: 61  KVEEVENKEVKVDVGL----------GKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGL 120
           K EE E  E + +              K   D   +T+VIEHCKQC SFK RA QV+TGL
Sbjct: 61  KPEEKEETETETETETETKTENVEEKDKTTADGTGKTIVIEHCKQCNSFKTRATQVKTGL 120

Query: 121 ENGVPGITVLLNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKI 172
           E+ VPGI VLLNP+KPRRGCFEIR + GEKFISLLDMKRPF  MK+L+M+EVI+DII KI
Sbjct: 121 EDAVPGINVLLNPEKPRRGCFEIRREGGEKFISLLDMKRPFKPMKDLDMEEVIADIISKI 180

[Close]

BLAST of CSPI02G22850 vs. NCBI nr
Match: gi|1009136029|ref|XP_015885312.1| (PREDICTED: selenoprotein H [Ziziphus jujuba])

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38
Identity = 101/181 (55.80%), Postives = 120/181 (66.30%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATS---RVTRSSARLSANSKA------DLTVTELPKSKK 60
           MAPRKR+ +QEE      PA AT+   RVTRSS R  AN  +      +    ELPK KK
Sbjct: 1   MAPRKRSASQEE------PAKATTESVRVTRSSTRRVANPNSADSFPNESVKPELPKKKK 60

Query: 61  AKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLE 120
            K A  E  K E+V+ +    +  L   D DA  RT+++EHCKQC SFK RA+QV+ GL 
Sbjct: 61  VKVA--ETKKKEKVKEERKMEEETLEMADGDAAHRTIIVEHCKQCNSFKTRALQVEKGLL 120

Query: 121 NGVPGITVLLNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK 173
            GVP + V LNPDKPRRGCFEIR KDGE FISLLDMKRPF  MK+L+M+EVI+DII KI 
Sbjct: 121 KGVPNVKVELNPDKPRRGCFEIREKDGEIFISLLDMKRPFKPMKDLDMEEVIADIINKIT 173

[Close]

BLAST of CSPI02G22850 vs. NCBI nr
Match: gi|729449945|ref|XP_010523249.1| (PREDICTED: selenoprotein H-like [Tarenaya hassleriana])

HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37
Identity = 102/182 (56.04%), Postives = 120/182 (65.93%), Query Frame = 1


Query: 1   MAPRKRTKNQEEDLVVEKPAPATSRVTRSSARLS--------ANSKADLT--VTELPKSK 60
           MAPRK   + EE     KP  A+ RVTRS  R +        ANS    T  V     +K
Sbjct: 1   MAPRKTKTDGEEK---SKPVTASLRVTRSMVRRTRSSTQRNGANSTGSATKLVNTSSSAK 60

Query: 61  KAKRAP-KENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTG 120
           KAKR   KE GK +E + KE   + G+    +D+K  T+VIEHCKQC SFK RAIQV+ G
Sbjct: 61  KAKRKTRKEAGKRKEEDTKENATEEGVAS--EDSKKNTIVIEHCKQCNSFKTRAIQVKEG 120

Query: 121 LENGVPGITVLLNPDKPRRGCFEIRSKDGEKFISLLDMKRPFTRMKELNMDEVISDIIEK 172
           LE GVPGITV++NPDKPRRGCFEIR + G+K ISLLDMKRPF  MK L+M EVI+DIIEK
Sbjct: 121 LEEGVPGITVIVNPDKPRRGCFEIREEGGQKIISLLDMKRPFAEMKALDMKEVIADIIEK 177

The following BLAST results are available for this feature:

BLAST of CSPI02G22850 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G22850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPC9_CUCSA	2.3e-86	98.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379100 PE=4 SV=1	[more]
A0A067KNP0_JATCU	7.9e-42	56.35	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07005 PE=4 SV=1	[more]
A0A067FMA4_CITSI	1.9e-35	49.76	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028564mg PE=4 SV=1	[more]
V4UGQ3_9ROSI	1.9e-35	49.76	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009502mg PE=4 SV=1	[more]
B9SPQ2_RICCO	6.0e-34	50.85	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0204920 PE=4 SV=1	[more]

BLAST of CSPI02G22850 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24440.1	3.2e-34	52.83	selenium binding	[more]
AT4G31360.1	3.5e-33	47.85	selenium binding	[more]

BLAST of CSPI02G22850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441986\|ref\|XP_004138763.1\|	3.4e-86	98.26	PREDICTED: selenoprotein H [Cucumis sativus]	[more]
gi\|659088655\|ref\|XP_008445096.1\|	2.5e-81	93.60	PREDICTED: selenoprotein H [Cucumis melo]	[more]
gi\|802624107\|ref\|XP_012076318.1\|	1.1e-41	56.35	PREDICTED: selenoprotein H [Jatropha curcas]	[more]
gi\|1009136029\|ref\|XP_015885312.1\|	3.4e-38	55.80	PREDICTED: selenoprotein H [Ziziphus jujuba]	[more]
gi\|729449945\|ref\|XP_010523249.1\|	1.3e-37	56.04	PREDICTED: selenoprotein H-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008430	selenium binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G22850.1	CSPI02G22850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33638	FAMILY NOT NAMED	coord: 2..171 score: 4.8
None	No IPR available	PANTHER	PTHR33638:SF1	SELENOPROTEIN H	coord: 2..171 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G22850	Cla022266	Watermelon (97103) v1	cpiwmB112
CSPI02G22850	Csa2G379100	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G22850	MELO3C011199	Melon (DHL92) v3.5.1	cpimeB118
CSPI02G22850	ClCG08G012760	Watermelon (Charleston Gray)	cpiwcgB168
CSPI02G22850	Lsi08G011370	Bottle gourd (USVL1VR-Ls)	cpilsiB139
CSPI02G22850	MELO3C011199.2	Melon (DHL92) v3.6.1	cpimedB114
CSPI02G22850	CsaV3_2G031490	Cucumber (Chinese Long) v3	cpicucB081
CSPI02G22850	Cla97C08G156010	Watermelon (97103) v2	cpiwmbB162
CSPI02G22850	Bhi04G000857	Wax gourd	cpiwgoB160
CSPI02G22850	Cucsa.161850	Cucumber (Gy14) v1	cgycpiB239
CSPI02G22850	CmaCh05G006370	Cucurbita maxima (Rimu)	cmacpiB794
CSPI02G22850	CmoCh12G002370	Cucurbita moschata (Rifu)	cmocpiB164
CSPI02G22850	Cp4.1LG07g02020	Cucurbita pepo (Zucchini)	cpecpiB826
CSPI02G22850	Cp4.1LG11g05630	Cucurbita pepo (Zucchini)	cpecpiB093
CSPI02G22850	CsGy2G022610	Cucumber (Gy14) v2	cgybcpiB057
CSPI02G22850	Carg03877	Silver-seed gourd	carcpiB1014
CSPI02G22850	Carg08321	Silver-seed gourd	carcpiB0063

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G22850	Cucumber (Chinese Long) v3	cpicucB095
CSPI02G22850	Watermelon (97103) v2	cpiwmbB143
CSPI02G22850	Wax gourd	cpiwgoB202
CSPI02G22850	Wild cucumber (PI 183967)	cpicpiB066
CSPI02G22850	Cucumber (Gy14) v1	cgycpiB469
CSPI02G22850	Cucurbita maxima (Rimu)	cmacpiB013
CSPI02G22850	Cucurbita maxima (Rimu)	cmacpiB165
CSPI02G22850	Cucurbita maxima (Rimu)	cmacpiB179
CSPI02G22850	Cucurbita maxima (Rimu)	cmacpiB445
CSPI02G22850	Cucurbita moschata (Rifu)	cmocpiB003
CSPI02G22850	Cucurbita moschata (Rifu)	cmocpiB150
CSPI02G22850	Cucurbita moschata (Rifu)	cmocpiB434
CSPI02G22850	Cucurbita moschata (Rifu)	cmocpiB783
CSPI02G22850	Cucumber (Chinese Long) v2	cpicuB075
CSPI02G22850	Melon (DHL92) v3.5.1	cpimeB124
CSPI02G22850	Watermelon (Charleston Gray)	cpiwcgB148
CSPI02G22850	Watermelon (97103) v1	cpiwmB133
CSPI02G22850	Cucurbita pepo (Zucchini)	cpecpiB540
CSPI02G22850	Cucurbita pepo (Zucchini)	cpecpiB775
CSPI02G22850	Cucurbita pepo (Zucchini)	cpecpiB811
CSPI02G22850	Cucurbita pepo (Zucchini)	cpecpiB819
CSPI02G22850	Bottle gourd (USVL1VR-Ls)	cpilsiB120
CSPI02G22850	Melon (DHL92) v3.6.1	cpimedB119
CSPI02G22850	Cucumber (Gy14) v2	cgybcpiB105
CSPI02G22850	Silver-seed gourd	carcpiB0587
CSPI02G22850	Silver-seed gourd	carcpiB0664
CSPI02G22850	Silver-seed gourd	carcpiB1010