CSPI02G18150 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G18150
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 16865360 .. 16865738 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTACAGCAAGCAATTGGATCTTCTCATTCTTTCATCTTCTACACTCTATAAATAATTTCACGTTATTCATAATCAATTTCCACAGAAACATCAACATAGTGTACTATCTCATTCTCCAGTAGGACAAAAGTTGTTGGGGCATCTATTGAAATGAGTCTCTTCTCTCTAATTTTCCGTTTGTTCCCTTCTTGCCTCTGCTCATCCCCAGTCTCAGATGTCGGGAAGGAGATTCCGGTGAAGAAATTGGCAGCGCCCGCGGAGACTAAGGAAGCTCCGATTGAAGTGGGCAATTCTCATGTTAATTCCTATCACTCTCACTTGTACTGGCGATGACGATGCCCATTCCATCAATTGTACGAGCTAGGGAGGATTGCTT

mRNA sequence

ATGAGTCTCTTCTCTCTAATTTTCCGTTTGTTCCCTTCTTGCCTCTGCTCATCCCCAGTCTCAGATGTCGGGAAGGAGATTCCGGTGAAGAAATTGGCAGCGCCCGCGGAGACTAAGGAAGCTCCGATTGAAGTGGGCAATTCTCATGTTAATTCCTATCACTCTCACTTGTACTGGCGATGA

Coding sequence (CDS)

ATGAGTCTCTTCTCTCTAATTTTCCGTTTGTTCCCTTCTTGCCTCTGCTCATCCCCAGTCTCAGATGTCGGGAAGGAGATTCCGGTGAAGAAATTGGCAGCGCCCGCGGAGACTAAGGAAGCTCCGATTGAAGTGGGCAATTCTCATGTTAATTCCTATCACTCTCACTTGTACTGGCGATGA
Homology
[Close]
BLAST of CSPI02G18150 vs. TrEMBL
Match: A0A0A0LKG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351860 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-25
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 1 

Query: 1  MSLFSLIFRLFPSCLCSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60
          MSLFSLIFRLFPSCL SSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR
Sbjct: 1  MSLFSLIFRLFPSCLSSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60

[Close]
BLAST of CSPI02G18150 vs. NCBI nr
Match: gi|700207286|gb|KGN62405.1| (hypothetical protein Csa_2G351860 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 3.4e-25
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 1 

Query: 1  MSLFSLIFRLFPSCLCSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60
          MSLFSLIFRLFPSCL SSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR
Sbjct: 1  MSLFSLIFRLFPSCLSSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60

The following BLAST results are available for this feature:
BLAST of CSPI02G18150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G18150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKG4_CUCSA2.4e-2598.33Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351860 PE=4 SV=1[more]
BLAST of CSPI02G18150 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G18150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207286|gb|KGN62405.1|3.4e-2598.33hypothetical protein Csa_2G351860 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G18150.1CSPI02G18150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G18150Csa2G351860Cucumber (Chinese Long) v2cpicuB065
CSPI02G18150MELO3C010767Melon (DHL92) v3.5.1cpimeB118
CSPI02G18150MELO3C010767.2Melon (DHL92) v3.6.1cpimedB114
CSPI02G18150CsaV3_2G025730Cucumber (Chinese Long) v3cpicucB081
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G18150Silver-seed gourdcarcpiB0209
CSPI02G18150Silver-seed gourdcarcpiB0352
CSPI02G18150Silver-seed gourdcarcpiB0732
CSPI02G18150Silver-seed gourdcarcpiB0806
CSPI02G18150Cucumber (Chinese Long) v3cpicucB103
CSPI02G18150Watermelon (97103) v2cpiwmbB141
CSPI02G18150Watermelon (97103) v2cpiwmbB166
CSPI02G18150Wax gourdcpiwgoB159
CSPI02G18150Wax gourdcpiwgoB198
CSPI02G18150Wild cucumber (PI 183967)cpicpiB074
CSPI02G18150Cucumber (Gy14) v1cgycpiB520
CSPI02G18150Cucumber (Gy14) v1cgycpiB578
CSPI02G18150Cucurbita maxima (Rimu)cmacpiB011
CSPI02G18150Cucurbita maxima (Rimu)cmacpiB175
CSPI02G18150Cucurbita maxima (Rimu)cmacpiB439
CSPI02G18150Cucurbita maxima (Rimu)cmacpiB793
CSPI02G18150Cucurbita moschata (Rifu)cmocpiB002
CSPI02G18150Cucurbita moschata (Rifu)cmocpiB160
CSPI02G18150Cucurbita moschata (Rifu)cmocpiB782
CSPI02G18150Cucumber (Chinese Long) v2cpicuB080
CSPI02G18150Melon (DHL92) v3.5.1cpimeB148
CSPI02G18150Watermelon (Charleston Gray)cpiwcgB147
CSPI02G18150Watermelon (Charleston Gray)cpiwcgB172
CSPI02G18150Watermelon (97103) v1cpiwmB116
CSPI02G18150Watermelon (97103) v1cpiwmB132
CSPI02G18150Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G18150Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G18150Cucurbita pepo (Zucchini)cpecpiB773
CSPI02G18150Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G18150Bottle gourd (USVL1VR-Ls)cpilsiB114
CSPI02G18150Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G18150Melon (DHL92) v3.6.1cpimedB142
CSPI02G18150Cucumber (Gy14) v2cgybcpiB057
CSPI02G18150Cucumber (Gy14) v2cgybcpiB163